CX291325

Overview
NameCX291325
Unique NameCX291325
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length188
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15105 contig Ccv1_Contig15105:597..784. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.384e-28
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 1 
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYNENGAMVPVRVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  171 TQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 232
[Close]
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.384e-28
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 1 
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYNENGAMVPVRVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  170 TQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231
[Close]
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.384e-28
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 1 
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYNENGAMVPVRVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  171 TQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 232
[Close]
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.384e-28
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 1 
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYNENGAMVPVRVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  170 TQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231
[Close]
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.808e-28
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 1 
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYNENGAMVP+RVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  171 TQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 232
[Close]
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.808e-28
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 1 
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYNENGAMVP+RVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  174 TQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
[Close]
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.808e-28
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 1 
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYNENGAMVP+RVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  174 TQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
[Close]
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.808e-28
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 1 
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYNENGAMVP+RVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  174 TQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
[Close]
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 1.808e-28
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 1 
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYNENGAMVP+RVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  174 TQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
[Close]
BLAST of CX291325 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.084e-28
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 1 
Query:    1 TQVTVEYYNENGAMVPVRVHTVLISTQHDKTVTNDEIAADLKEHVITPVIPEKYLDEKTIFH 186
            TQVTVEYYN+NGAMVPVRVHTVLISTQHD+TVTNDEIAADLKEHVI PVIPEKYLDEKTIFH
Sbjct:  170 TQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231
The following BLAST results are available for this feature:
BLAST of CX291325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
METK_POPDE1.384e-2896.77S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK_MESCR1.384e-2896.77S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK3_POPTR1.384e-2896.77S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK1_ELAUM1.384e-2896.77S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK5_POPTR1.808e-2895.16S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK4_ATRNU1.808e-2895.16S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]
METK3_ATRNU1.808e-2895.16S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK2_ATRNU1.808e-2895.16S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK1_ATRNU1.808e-2895.16S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK1_POPTR3.084e-2895.16S-adenosylmethionine synthetase 1 OS=Populus trich... [more]

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Properties
Property NameValue
Genbank descriptionC03006G02SK OF2 Citrus clementina cDNA clone C03006G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291325 ID=CX291325; Name=CX291325; organism=Citrus clementina; type=EST; length=188bp
ACACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGT
GAGAGTTCACACAGTTTTGATCTCTACTCAGCATGACAAAACTGTGACTA
ATGATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCACGCCTGTTATT
CCTGAAAAGTACCTTGATGAGAAGACTATCTTCCATCT
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