CX291351

Overview
NameCX291351
Unique NameCX291351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig215 contig Ccv1_Contig215:175..866. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291351 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.650e-44
Identity = 88/182 (48.35%), Postives = 122/182 (67.03%), Query Frame = 2
Query:   14 SSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGG-VFRIGSISDNPTGGGIYQ---DTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 547
            ++ G+V+GK R+A+N VS    +TPLKLA+YF I   VF+  +I+D+PT   I     +  V+   +R F+E+VF+N E  +QS+HL+GY F+ V ++ G WT   R  YNL DAV+R TVQVYPK W+AI +  DN GMWN+RSE+  R+YLGQQ Y  V +   SLRDEY +P+ +  CG
Sbjct:  359 NTQGKVDGKLRFALNGVSHTEPETPLKLAEYFGISDKVFKYDTITDDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEKSVQSWHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENTERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCG 540          
BLAST of CX291351 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.392e-42
Identity = 85/186 (45.70%), Postives = 113/186 (60.75%), Query Frame = 2
Query:   11 FSSAGQVNGKQRYAINSVSFIPADTPLKLADYF-KIGGVFRIGSISDNPTG--GGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCGKAAG 559
            F+S  QV GK RY +N +S    +TPLKL +YF      F+   ++D        +   T V  A YR F+EI+F+N E  I++YHL+GY F+ V ++ G+W+   R  YNL D ++R  +QVYP SW+AI +  DN GMWNLRSE W + YLG+Q Y  V + S SLRDEY IP N  LCG   G
Sbjct:  360 FNSMSQVGGKLRYGLNGISHTNGETPLKLVEYFGATNKAFKYDLMADEAPADPSKLTIATNVKNATYRNFVEIIFENHEKTIRTYHLDGYSFFAVAVEPGRWSPEKRKNYNLVDGLSRNNIQVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVLSPSRSLRDEYNIPDNHPLCGIVKG 545          
BLAST of CX291351 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.592e-38
Identity = 76/173 (43.93%), Postives = 110/173 (63.58%), Query Frame = 2
Query:   29 VNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 547
            ++GK+R  +N +SF    TP++LAD  K+  V+++      P  G     T+++   YR F+E+V QN++  +QSYH++GY F+VVGMD G+WT  SR  YN  D +AR T+QVYP +WSAI I+LDN G WNLR+E+    YLGQ+ Y+RV     + + E+  P N   CG
Sbjct:  377 ISGKRRTTLNGISFKNPSTPIRLADKLKVKDVYKL-DFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYCG 548          
BLAST of CX291351 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37
Identity = 70/173 (40.46%), Postives = 110/173 (63.58%), Query Frame = 2
Query:   29 VNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 547
            +NG  R  +N +SF+   TP++LAD  K+ G +++    D P    +  D +++ A Y+ FI++VFQN++  IQS+H++GY F+VVGMD G W+   +  YN  DA++R T++VYP  W+A+ I+LDNVG+WN+R E+  R YLG++ Y+R+       + E   P N   CG
Sbjct:  380 INGALRATLNGISFVNPSTPVRLADRNKVKGAYKL-DFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMDPPDNVLYCG 551          
BLAST of CX291351 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.542e-36
Identity = 72/175 (41.14%), Postives = 113/175 (64.57%), Query Frame = 2
Query:   26 QVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQ-DTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNARLCG 547
            ++NGK R  +N +SF+   TP++LAD  K+ G + +    D P    + +  ++++ A Y+ FI+++FQN++  IQS+H++GY F+VV MD G W+    + YN  DAVAR TV+VYP +W+A+ I+LDNVG+WN+R E+  R YLGQ+ Y+R+     +   E   P+N   CG
Sbjct:  378 KINGKLRATLNGISFVNPSTPMRLADDHKVKGDYML-DFPDRPLDEKLPRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDAVARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMDPPENVMYCG 551          
The following BLAST results are available for this feature:
BLAST of CX291351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ASOL_BRANA5.650e-4448.35L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
ASOL_TOBAC1.392e-4245.70L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
SKU5_ARATH1.592e-3843.93Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
SKS1_ARATH5.122e-3740.46Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
SKS2_ARATH2.542e-3641.14Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionC03007A05SK OF2 Citrus clementina cDNA clone C03007A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291351 ID=CX291351; Name=CX291351; organism=Citrus clementina; type=EST; length=692bp
GAGGCAGGCTTTCAGTTCTGCTGGGCAAGTTAATGGCAAGCAGAGATATG
CAATCAACAGCGTGTCCTTTATTCCAGCTGACACTCCCCTAAAGCTTGCT
GACTACTTCAAGATTGGAGGAGTTTTCCGCATCGGAAGCATTTCTGATAA
TCCTACCGGTGGAGGGATTTACCAAGACACAGCAGTTATGGGGGCTGACT
ACAGAGCTTTTATTGAAATTGTGTTCCAAAATGATGAAGACATTATCCAG
AGCTATCACCTTAATGGCTACCAATTTTGGGTTGTCGGTATGGATGGAGG
CCAATGGACATCTGCTAGTAGAAACCAGTACAATCTCCGTGATGCAGTTG
CCCGTGTAACCGTTCAGGTGTATCCCAAGTCATGGTCTGCGATTTATATA
GCACTGGATAACGTAGGTATGTGGAACTTGAGGTCTGAGTCTTGGGCACG
ACAGTACCTTGGACAACAATTTTACTTGCGAGTTTACACAGCATCAACTT
CACTCAGGGATGAATATCCCATCCCAAAGAATGCACGTCTTTGCGGCAAA
GCAGCTGGCAGACACACGAGGCCCCTCTAAATTATTATTTAATAAAATGA
TCCACCGTTGGGTACGCAATTTGTGGATTCGAGTAGAATTTTGATTTCTA
ATCTTATATTCGATTAGTTTAATGGTGCTTTGCTTATTTATG
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