CX291360

Overview
NameCX291360
Unique NameCX291360
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length594
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14651 contig Ccv1_Contig14651:47..640. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291360 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 4.344e-73
Identity = 140/188 (74.47%), Postives = 158/188 (84.04%), Query Frame = 1
Query:   31 MASKSKILFIGGTGYIGKFTVEASVKAGHPTFVLVRESTISGPSKSQLLDHFKNLGVNLVIGDVLNHESLVKAIKRVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRVEGAVKPTKSTYDVKAKIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPEATAPPRDKVVILGDGNPKAV 594
            MA KSKILFIGGTGYIGKF VEAS KAGH TFVLVREST+S P+K++L+D FK+ GV  V GD+ +HESLVKAIK+VDVVISTVGH LLADQVK+IAAIKEAGNVKRF PSEFGNDVDRV  AV+P K+ ++ KA+IRR VEAEGIP+TYV ++ F GY LPNL QP A  PP DKVVILG GN KAV
Sbjct:    1 MAGKSKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFVHGDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRVH-AVEPAKAAFNTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVILGHGNTKAV 187          
BLAST of CX291360 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.401e-63
Identity = 127/187 (67.91%), Postives = 147/187 (78.61%), Query Frame = 1
Query:   40 KSKILFIGGTGYIGKFTVEASVKAGHPTFVLVRESTISGPSKSQLLDHFKNLGVNLVIGDVLNHESLVKAIKRVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRVEGAVKPTKSTYDVKAKIRRAVEAEGIPYTYVESYCFDGYFLPNLLQ--PEATAPPRDKVVILGDGNPKAV 594
            KSKIL IGGTGYIGKF VEAS KAGH TF LVRE+T+S P K + +  FK+LGV ++ GD+ +HESLVKAIK+VDVVISTVG   + DQ KII+AIKEAGNVKRFLPSEFG DVDR   AV+P KS +  K +IRR +EAEGIPYTY  + CF GY+LP L+Q  P  T+PPRDKV ILGDGN KAV
Sbjct:    5 KSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRT-SAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVTILGDGNAKAV 190          
BLAST of CX291360 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.389e-63
Identity = 122/188 (64.89%), Postives = 144/188 (76.60%), Query Frame = 1
Query:   31 MASKSKILFIGGTGYIGKFTVEASVKAGHPTFVLVRESTISGPSKSQLLDHFKNLGVNLVIGDVLNHESLVKAIKRVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRVEGAVKPTKSTYDVKAKIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPEATAPPRDKVVILGDGNPKAV 594
            ++ KSKIL IGGTGYIGK+ VE S K+GHPTF L+REST+  P KS+L+D FK+ GV L+ GD+ N ESL+KAIK+VDVVISTVG     DQV II AIKEAGN+KRFLPSEFG DVD    A++P  S + +K +IRR +EAEGIPYTYV    F  +FLPNL Q EA  PPRDKVVI GDGNPKA+
Sbjct:    3 VSEKSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLFGDISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHAR-AIEPAASLFALKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVIFGDGNPKAI 189          
BLAST of CX291360 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.703e-54
Identity = 111/197 (56.35%), Postives = 146/197 (74.11%), Query Frame = 1
Query:   31 MASKSKILFIGGTGYIGKFTVEASVKAGHPTFVLVRES----------TISGP-SKSQLLDHFKNLGVNLVIGDVLNHESLVKAIKRVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRVEGAVKPTKSTYDVKAKIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPEATAPPRDKVVILGDGNPK 588
            MA+++KIL +G TG IG+  V AS+KAG+PT+ LVR++          T + P +K +L+D++++LGV L+ GD+ +HE+LVKAIK+VD+VI   G  L+ DQVKII AIKEAGNVK+F PSEFG DVDR E AV+P +  ++ KA IRR +EAEG+PYTY+  + F GYFL NL Q + T PPRDKVVILGDGN K
Sbjct:    1 MATENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHE-AVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDTTDPPRDKVVILGDGNVK 196          
BLAST of CX291360 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.241e-53
Identity = 115/197 (58.38%), Postives = 141/197 (71.57%), Query Frame = 1
Query:   31 MASKSKILFIGGTGYIGKFTVEASVKAGHPTFVLVREST--ISGPS---------KSQLLDHFKNLGVNLVIGDVLNHESLVKAIKRVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRVEGAVKPTKSTYDVKAKIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPEATAPPRDKVVILGDGNPK 588
            MAS+++IL +G TG IG+  V AS+KAG+PT+ L+R++   I+ PS         K +LL  FK  GV L+ GD+ +HE+LVKAIK+VD VI T G  L+ DQVKII AIKEAGNVKRF PSEFG DVDR   AV P +  +D KA IRR VEAEG+PYTY+  + F GYFL NL Q +AT PPRDKV+ILGDGN K
Sbjct:    1 MASQNRILVLGPTGAIGRHVVWASIKAGNPTYALIRKTPGDINKPSLVAAANPESKEELLQSFKAAGVILLEGDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFFPSEFGLDVDR-HDAVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQFDATEPPRDKVIILGDGNVK 196          
BLAST of CX291360 vs. ExPASy Swiss-Prot
Match: IFR_PEA (Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.673e-51
Identity = 107/195 (54.87%), Postives = 141/195 (72.31%), Query Frame = 1
Query:   31 MASKSKILFIGGTGYIGKFTVEASVKAGHPTFVLVREST--ISGP---------SKSQLLDHFKNLGVNLVIGDVLNHESLVKAIKRVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRVEGAVKPTKSTYDVKAKIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPEATAPPRDKVVILGDGN 582
            MA+++KIL +G TG IG+  V AS+KAG+PT+ LVR+++  ++ P         +K +LL +++  GV L+ GD+ +HE+LV AIK+VD VI   G  L+ DQVK+I AIKEAGNVKRF PSEFG DVDR   AV+P +  ++ KA IRR VE+EG+PYTY+  + F GYFL NL Q +AT PPRDKVVILGDGN
Sbjct:    1 MATENKILILGATGAIGRHIVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELLKNYQASGVILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFFPSEFGLDVDR-HDAVEPVRQVFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQIDATDPPRDKVVILGDGN 194          
BLAST of CX291360 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.461e-49
Identity = 102/187 (54.55%), Postives = 128/187 (68.45%), Query Frame = 1
Query:   34 ASKSKILFIGGTGYIGKFTVEASVKAGHPTFVLVRESTISGPSKSQLLDHFKNLGVNLVIGDVLNHESLVKAIKRVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRVEGAVKPTKSTYDVKAKIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPEATAPPRDKVVILGDGNPKAV 594
            + KSKIL +GGTGY+G+  V AS + GHPT  LVR++  S P+K+ LL  F++ GV L+ GD+ +  SLV A+K  DVVIS +G   +ADQ +++ AIKEAGNVKRF PSEFG DVDR  G V+P KS    K  IRRA EA GIPYTY  +  F G+ LP + Q  A  PP DK V+LGDG+ KAV
Sbjct:    3 SEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRT-GIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAV 188          
BLAST of CX291360 vs. ExPASy Swiss-Prot
Match: IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.325e-42
Identity = 92/191 (48.17%), Postives = 124/191 (64.92%), Query Frame = 1
Query:   40 KSKILFIGGTGYIGKFTVEASVKAGHPTFVLVRESTISGPSKSQLLDHFKNLGVNLVIGDVLNHESLVKAIKRVDVVISTVG------HTLLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRVEGAVKPTKSTYDVKAKIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPEATAPPRDKVVILGDGNPKAV 594
            KSK+L +GGTGY+G+  V+AS++ GH TF+L R        K Q+L  FK  G  LV     +H+SLV A+K VDVVI T+       H LL  Q+K++ AIK+AGN+KRFLPSEFG D   +  A++P + T+D K  +R+A+E   IP+TY+ + CF GYF  NL Q +   PPRDKV++ GDGN K V
Sbjct:    3 KSKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEIGLDIEKLQILLSFKKQGAILVEASFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLT-QLKLVEAIKDAGNIKRFLPSEFGMDPALMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDKVLLYGDGNVKPV 192          
BLAST of CX291360 vs. ExPASy Swiss-Prot
Match: EGS1_OCIBA (Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.479e-41
Identity = 89/189 (47.09%), Postives = 123/189 (65.08%), Query Frame = 1
Query:   22 VSEMASKSKILFIGGTGYIGKFTVEASVKAGHPTFVLVRESTISGPSKSQLLDHFKNLGVNLVIGDVLNHESLVKAIKRVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRVEGAVKPTKSTYDVKAKIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPEATAPPRDKVVILGDGNPK 588
            + E   KSKIL  GGTGYIG   V+ S+K GHPT+V  R ++    SK+ LLD F++LG  +V G++  HE LV+ +K+VDVVIS +    + DQ KI+ AIK AGN+KRFLPS+FG + DR+  A+ P ++  + K  IRRA+E   IPYTYV + CF  YF+  LL+P     P+D++ + G G  K
Sbjct:    1 MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS----SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRI-NALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKDEITVYGTGEAK 181          
BLAST of CX291360 vs. ExPASy Swiss-Prot
Match: IGS1_PETHY (Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.331e-40
Identity = 89/186 (47.85%), Postives = 120/186 (64.52%), Query Frame = 1
Query:   40 KSKILFIGGTGYIGKFTVEASVKAGHPTFVLVRE-STISGPSKSQLLDHFKNLGVNLVIGDVLNHESLVKAIKRVDVVISTVGHTLLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRVEGAVKPTKSTYDVKAKIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPEATAPPRDKVVILGDGNPKAV 594
            K KIL +G TGY+GK+ V+AS+  GHPT+  V      S  SK QLL  F++LGV +  G++  H+ LV   K VD+VIST+      +Q+K+I AIKEAGN+KRF+PSEFGN+VDRV  A+   ++  D K KIRRA EA GIP+T+V +     YF+  LL P   +   ++V I G G+ KAV
Sbjct:    5 KGKILILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFYGELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVR-ALPRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQKS---EQVTIYGSGDAKAV 186          
The following BLAST results are available for this feature:
BLAST of CX291360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
IFRH_SOLTU4.344e-7374.47Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_ARATH1.401e-6367.91Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFRH_TOBAC2.389e-6364.89Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
IFR_MEDSA7.703e-5456.35Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
IFR_CICAR2.241e-5358.38Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
IFR_PEA4.673e-5154.87Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 ... [more]
IFRH_MAIZE7.461e-4954.55Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFRH_LUPAL2.325e-4248.17Isoflavone reductase homolog OS=Lupinus albus PE=2... [more]
EGS1_OCIBA7.479e-4147.09Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=... [more]
IGS1_PETHY6.331e-4047.85Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03007B03SK OF2 Citrus clementina cDNA clone C03007B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291360 ID=CX291360; Name=CX291360; organism=Citrus clementina; type=EST; length=594bp
CTCAGTAATTGAACTGATTGAGTCTCAGAAATGGCATCGAAAAGTAAGAT
TCTATTCATCGGCGGGACAGGGTATATCGGTAAATTCACTGTCGAAGCGA
GCGTAAAAGCCGGCCACCCGACGTTCGTGCTCGTGAGAGAATCCACAATC
TCTGGTCCTTCCAAATCTCAACTCCTCGATCACTTCAAAAACCTCGGCGT
CAATCTCGTCATAGGAGATGTGTTGAATCACGAGAGTTTGGTGAAGGCGA
TTAAACGCGTGGACGTGGTGATATCAACGGTCGGTCACACTTTATTAGCT
GATCAGGTCAAGATTATTGCTGCCATTAAAGAAGCCGGTAACGTTAAGAG
ATTCTTACCATCGGAATTTGGAAATGATGTTGATCGAGTCGAAGGCGCCG
TAAAGCCAACAAAATCGACGTATGACGTAAAGGCGAAAATCCGCCGAGCC
GTTGAGGCAGAAGGCATTCCGTACACTTACGTAGAATCTTATTGTTTTGA
TGGCTATTTCCTCCCCAATTTGTTGCAGCCTGAGGCCACTGCCCCCCCTA
GGGATAAGGTTGTCATCTTAGGCGATGGAAATCCAAAAGCTGTT
back to top