CX291365
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291365 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.520e-39 Identity = 78/105 (74.29%), Postives = 89/105 (84.76%), Query Frame = -3 Query: 331 KELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEIIQSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 645 ++LK +ET+LEKGISRIRSKKNELLFAEIEYMQK+E+DLHN+NQ LRAKIAENER QQ+MNLM G S YE+ Q FD R+Y Q+N LQP NHY RQDQ ALQLV Sbjct: 138 RDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQQHMNLMPGSSDYELAPPQSFDGRNYIQLNGLQPNNHYSRQDQTALQLV 242
BLAST of CX291365 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.962e-37 Identity = 80/125 (64.00%), Postives = 97/125 (77.60%), Query Frame = -3 Query: 331 NMQNQTET-CG*ITKWVNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEII-QSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 699 N+QNQ G +N ++L+N+E ++EKGIS+IR+KKNELLFAEIEYMQKRE+DLHN+NQ LRAKIAE ER QQ MNLM G SSY+++ Q FD+R+Y QVN LQ NHYPRQDQ LQLV Sbjct: 119 NLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERSQQ-MNLMPGSSSYDLVPPQQSFDARNYLQVNGLQTNNHYPRQDQPPLQLV 242
BLAST of CX291365 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 7.586e-36 Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = -3 Query: 331 NMQNQTETCG*ITKWVNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEII------QSQPFDSRSYFQVNALQPTNHY----PRQDQMALQLV 699 N Q ET G ++ KEL+N+E RLE+ I+RIRSKKNELLF+EI+YMQKREVDLHN NQ+LRAKIAENER +++LM GGS+YE + QSQPFDSR+YFQV ALQP NH+ RQDQ ALQLV Sbjct: 124 NRQLMGETIGSMSP----KELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSSAGRQDQTALQLV 252
BLAST of CX291365 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.908e-36 Identity = 84/133 (63.16%), Postives = 99/133 (74.44%), Query Frame = -3 Query: 331 NMQNQTETCG*ITKWVNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEII------QSQPFDSRSYFQVNALQPTNHY----PRQDQMALQLV 699 N Q ET G ++ KEL+N+E RL++ ++RIRSKKNELLFAEI+YMQKREVDLHN NQLLRAKIAENER +M+LM GGS+YE I Q QPFDSR+YFQV ALQP NH+ R+DQ ALQLV Sbjct: 124 NRQLMGETIGSMSP----KELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENERNNPSMSLMPGGSNYEQIMPPPQTQPQPFDSRNYFQVAALQPNNHHYSSAGREDQTALQLV 252
BLAST of CX291365 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.207e-35 Identity = 80/130 (61.54%), Postives = 96/130 (73.85%), Query Frame = -3 Query: 331 NMQNQTETC-G*ITKWVNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERG-----QQNMNLMQGGSSYEII-QSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 699 N+QNQ G ++ ++LKN+E ++EKGIS+IRSKKNELLFAEIEYMQKRE+DLHN+NQ LRAKIAE ER QQ MNLM G SSYE++ FD+R+Y QVN LQ NHY RQDQ +LQLV Sbjct: 119 NLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERAQQQQQQQQMNLMPGSSSYELVPPPHQFDTRNYLQVNGLQTNNHYTRQDQPSLQLV 248
BLAST of CX291365 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.883e-35 Identity = 83/130 (63.85%), Postives = 95/130 (73.08%), Query Frame = -3 Query: 331 NMQNQTETC-G*ITKWVNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQ---QNMNLMQGGSS--YEII-QSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 699 N+ NQ G + KELKN+E R+EKGIS+IRSKKNELLFAEIEYMQKREVDLHN+NQ LRAKIAE ER Q Q MNLM G SS +E++ Q FD+R+Y QVN LQ NHYPRQDQ +QLV Sbjct: 119 NLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQHQHQQMNLMPGSSSNYHELVPPPQQFDTRNYLQVNGLQTNNHYPRQDQPPIQLV 248
BLAST of CX291365 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 55/104 (52.88%), Postives = 79/104 (75.96%), Query Frame = -3 Query: 349 VNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSS--YEIIQSQPFDSRSYFQVNALQPTNHYPRQDQ 654 ++ ++LK +E RLEKGI++IR++KNELL+AE+EYMQKREV+L N N LR+K+ ENERGQQ +N+M S+ Y+ + + P+DSR++ QVN +Q HY Q Q Sbjct: 120 MSLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVENERGQQPLNMMGAASTSEYDHMVNNPYDSRNFLQVNIMQQPQHYAHQLQ 223
BLAST of CX291365 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.869e-25 Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = -3 Query: 331 VNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENER---GQQNMNLMQGGSSYEI-----IQSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 654 +NFKELKN+E RLEKGISR+RSKKNELL AEIEYMQKRE++L ++N LRAKIAE R QQ +++QG + YE QSQ + +R+Y VN L+P + QDQ LQLV Sbjct: 134 LNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESSVIQGTTVYESGVSSHDQSQHY-NRNYIPVNLLEPNQQFSGQDQPPLQLV 248
BLAST of CX291365 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22 Identity = 53/118 (44.92%), Postives = 79/118 (66.95%), Query Frame = -3 Query: 352 NMQNQTETC-G*ITKWVNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEIIQSQ-PFDSRSYFQVNALQPTNHYPRQD 699 N+QN T G +N +ELK +E RL+KG+ +IR++KNELL AEIEYMQ+RE +L N N L++K+AE+ERG Q +N+M S+ E +Q+ +D R++ Q N + +YP Q+ Sbjct: 145 NLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERGLQTVNMMGSASTSEYVQNMIHYDPRNFLQFNIMHQPQYYPEQE 262
BLAST of CX291365 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22 Identity = 59/113 (52.21%), Postives = 76/113 (67.26%), Query Frame = -3 Query: 331 VNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENE-RGQQNMNLMQGGSSYEIIQSQPFDS----RSYFQVNALQPTNHYPRQDQMALQLV 654 +NFKELKN+E+RLEKGISR+RSKK+E+L AEIEYMQKRE++L N N LR+KI E QQ +++ G+ YE + S R+Y VN L+P + QDQ LQLV Sbjct: 134 LNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQYNRNYIAVNLLEPNQNSSNQDQPPLQLV 246 The following BLAST results are available for this feature:
BLAST of CX291365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291365 ID=CX291365; Name=CX291365; organism=Citrus clementina; type=EST; length=701bpback to top |