CX291370

Overview
NameCX291370
Unique NameCX291370
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:119..872. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.318e-68
Identity = 128/224 (57.14%), Postives = 167/224 (74.55%), Query Frame = 2
Query:  110 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA----TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQTPHWTN-IRNNLKKTCPLRIPTH-HVFDIRS 754
            P+ KGLSW FY ++CPK+E+I+RK+++   K+DIGLAA ++RIHFHDCFVQGC+ SVLL GS S   EQ++ PNL+LR++A   ++ LRA V K+CG+VVSC+DILALAARDSV LSGGP+Y +PLGRRDS  FA    T+ NLP PF N + ++ DF  +  N  + VALSGGHT+G+AHCP+FT+RLYP Q P       N+LK+TCP    ++  V DIRS
Sbjct:   39 PIVKGLSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYPNQDPTMNQFFANSLKRTCPTANSSNTQVNDIRS 262          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.854e-52
Identity = 103/182 (56.59%), Postives = 137/182 (75.27%), Query Frame = 2
Query:   98 AQKPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDELRARVHKEC-GRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFAT----VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTV 619
            A++PP+A GLS+ FY +SCPK ESIVR  +Q+A+++D+GLAAGL+R+HFHDCFVQGCD SVLL+GS +   EQ A PNL+LR  A K ++++  R+HKEC G VVSC+D+LALAARDSV +SGGP+Y +PLGRRDS +FAT    +  LP P +    +L    +   +A + VALSGGHT+
Sbjct:   32 ARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.016e-44
Identity = 95/215 (44.19%), Postives = 133/215 (61.86%), Query Frame = 2
Query:  116 AKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG---STSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQTPHWTNIRNNLKKTCPLRIPTHHVFD 745
            A+GLS T+Y  SCP  E IV+  + NAL+ D  LAAGLIR+ FHDCF++GCD S+LL+    +T+E+++  NLSLR    + +D+ + ++   C  VVSCADI+A+AARD+V  +GGP YD+P GR D K        NLPSPF N + ++  F ++ F  ++ VALSG HT+G+A C +F  RL    +   +   N L KTC         FD
Sbjct:   23 ARGLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLR--GYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARLTVPDSSLDSTFANTLSKTCSAGDNAEQPFD 235          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.016e-44
Identity = 90/184 (48.91%), Postives = 127/184 (69.02%), Query Frame = 2
Query:  116 AKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE--GSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 658
            ++GL   FY ++CP+LE IV+K + +A+ K   L A L+R+ FHDCFV+GCDGSVLL+   +  E++A PNLSLR      +D+ +A + K C  +VSC+DILAL ARD++    GP++++  GRRD + +    VNLPSPF N T +++DFR K  N ++ V LSGGHT+G+ HCP  TNRLY
Sbjct:   23 SQGLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNNQGEKSAVPNLSLR--GFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVSNINEVNLPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLY 204          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.264e-44
Identity = 87/189 (46.03%), Postives = 127/189 (67.20%), Query Frame = 2
Query:  107 PPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE--GSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 658
            P   +GL   FYD++CPK E IV+K +  A+K D  +AA L+R+ FHDCFV+GC+GSVLLE      E+N+ PNL+LR    + +D ++A + KEC  +VSC+D+LAL ARD++    GP++++  GRRD   +     ++NLPSPF+N + ++  F+ K  + ++ V LSGGHT+G  HCP  TNRLY
Sbjct:   26 PTNVQGLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKKDEKNSIPNLTLR--GFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLY 212          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.270e-43
Identity = 99/207 (47.83%), Postives = 127/207 (61.35%), Query Frame = 2
Query:  125 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-------PKQTPHWTNIRNNLKKTCPL 718
            LS   Y +SCP L  IVRKQ+  ALK +I +AA LIR+HFHDCFV GCD S+LL+G+ SE+ A PN++  +   + +D ++A V   C  VVSCADIL LAARDSV LSGGP + + LGR+D       +  NLPSPF     I+  F     N  + VALSG HT G A C  F+NRL+       P  T   T++ +NL+  CPL
Sbjct:   30 LSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADSEKLAIPNINSAR-GFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLE-TSLLSNLQTVCPL 234          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.119e-42
Identity = 87/180 (48.33%), Postives = 122/180 (67.78%), Query Frame = 2
Query:  137 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 658
            FY  SCP+ + IV   ++ A+ K+  +AA L+R+HFHDCFVQGCD S+LL+ S    SE+NA PN +  +   + +DE++A++ + C + VSCADILALAAR S  LSGGP+++LPLGRRDS+T +      N+P+P S    +L  F+ K  N  + V+LSGGHT+G+A C  F  RLY
Sbjct:   49 FYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVR-GFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLY 227          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.722e-42
Identity = 97/207 (46.86%), Postives = 126/207 (60.87%), Query Frame = 2
Query:  125 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-------PKQTPHWTNIRNNLKKTCPL 718
            LS   Y +SCP L  IVR Q++ ALK +I +AA LIR+HFHDCFV GCD SVLL+G+ SE+ A PN++      + +D ++A V   C  VVSCADIL LAARDSV LSGGP + + LGR+D      ++  NLPSPF     I+  F     N  + VALSG HT G A C  F+NRL+       P  T   T + ++L+  CP+
Sbjct:   30 LSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTNSEKLAIPNVN-SVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANNLPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLE-TTLLSDLQTVCPI 234          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.722e-42
Identity = 84/188 (44.68%), Postives = 122/188 (64.89%), Query Frame = 2
Query:  110 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST--SEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 658
            P+   L   FY  SCP  E IV+  + N +     LAA LIR+HFHDCFV+GCDGSVL+  ++  +E++A PNL++R     F+D +++ +  +C  +VSCADI+ALA+RD+V  +GGPN+ +P GRRD   S     + N+P P SN T +   F  +  + ++ V LSG HT+G++HC +FTNRLY
Sbjct:   21 PIQAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGNAERDATPNLTVR--GFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLY 206          
BLAST of CX291370 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 6.167e-42
Identity = 88/176 (50.00%), Postives = 117/176 (66.48%), Query Frame = 2
Query:  137 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFAT-VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 658
            +Y  SCPK ESIVR  +++    D  ++ GL+R+HFHDCFVQGCDGSVL++G ++EQ A PNL LR   L+ +D+ +AR+   C  VVSCADILALAARDSV LS GP++ +P GR+D + + AT   NLPSP  +  V    F++K  +  + V L G HT+G   C  F  RLY
Sbjct:   33 YYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKSAEQAALPNLGLR--GLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEASNLPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCLFFRYRLY 206          
The following BLAST results are available for this feature:
BLAST of CX291370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER12_ARATH1.318e-6857.14Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER1_SORBI3.854e-5256.59Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER47_ARATH1.016e-4444.19Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER27_ARATH1.016e-4448.91Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER56_ARATH2.264e-4446.03Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER59_ARATH3.270e-4347.83Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER9_ARATH2.119e-4248.33Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PERN_ARMRU4.722e-4246.86Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER3_ARATH4.722e-4244.68Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER25_ARATH6.167e-4250.00Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC03007C01SK OF2 Citrus clementina cDNA clone C03007C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291370 ID=CX291370; Name=CX291370; organism=Citrus clementina; type=EST; length=755bp
GTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTTCATTTCTCTTCTTT
TGATATCTTCTCTTTTGCTTGCTTCTTTATCCTCTTCTTTCACTGAGGCA
CAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAG
CTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGA
AAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCATGAT
TGCTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAG
TGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAAGAGGCTTTAAAAT
TTGTAGACGAACTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTT
TCTTGCGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTC
TGGAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACAT
TCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATC
CTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCT
CTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTTACCAATC
GCCTCTATCCCAAACAGACCCCACACTGGACAAACATTCGCAACAATCTC
AAAAAGACATGCCCACTTCGGATTCCAACACACCACGTCTTCGACATCCG
GTCCC
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