CX291389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291389 vs. ExPASy Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.917e-35 Identity = 89/138 (64.49%), Postives = 94/138 (68.12%), Query Frame = 3 Query: 96 MASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETKS 509 MASVTGTS M S S + R GKSF LRMRSA RF V CAAKPETV+KVC IVKKQLALP D+ VTGESKFA LGADSLDTVEIVMGL SAQ+I+TVQDAADLIEKLIE KS Sbjct: 1 MASVTGTSISMASFKASLAPS--RVSNLRSVSLPIKGKSFAPLRMRSA-RFVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEESAQSIATVQDAADLIEKLIEKKS 135
BLAST of CX291389 vs. ExPASy Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.637e-30 Identity = 78/136 (57.35%), Postives = 86/136 (63.24%), Query Frame = 3 Query: 99 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 506 ++ G S C+ S SCS GR KSFPSLR RVSC AKPETV KVC+IVKKQLALP D+ V G SKF+ALGADSLDTVEIVMGL SAQ+I TVQDAADLIEKL+E K Sbjct: 3 SAAAGASICIKSASCS-PLAPGRISSLRSVSLPVSRKSFPSLRSSKGSFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 137
BLAST of CX291389 vs. ExPASy Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.413e-28 Identity = 77/137 (56.20%), Postives = 87/137 (63.50%), Query Frame = 3 Query: 99 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRM-RSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 506 ++ G S C+ S S S GR KSFPSL+ +S+ RVSC AKPETV KVC IVKKQLALP D+ V G SKF+ALGADSLDTVEIVMGL SAQ+I TVQDAADLIEKL+E K Sbjct: 3 SAAAGASICIKSASFS-PLAPGRISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 138
BLAST of CX291389 vs. ExPASy Swiss-Prot
Match: ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.931e-28 Identity = 74/139 (53.24%), Postives = 84/139 (60.43%), Query Frame = 3 Query: 99 ASVTGTSACMTSLSCSFKQTQ--GRXXXXXXXXXXXXGKSFPSLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 506 A+ + C+ S SCS + Q GK FPSLR P FRV C AK ETV +VC+IVKKQLALP D+ V G SKF+ALGADSLDTVEIVMGL SAQ+I TVQDAADLIEKL+ K Sbjct: 4 AAAGSSLICIKSASCSLNRAQVPSGLSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAKQETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLVGNK 142
BLAST of CX291389 vs. ExPASy Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 74/136 (54.41%), Postives = 85/136 (62.50%), Query Frame = 3 Query: 99 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 506 ++ +S C+ S SCS GR KSF S R + RV+C AKPETV KVC IVKKQLALP D+ V+G SKF+ALGADSLDTVEIVMGL SAQ+I TVQDAADLIEKL+E K Sbjct: 3 SAAPASSICIKSASCS-ALAPGRISSLRSVSLPVSRKSFFS--RRGSFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 135
BLAST of CX291389 vs. ExPASy Swiss-Prot
Match: ACP1_HORVU (Acyl carrier protein 1, chloroplastic OS=Hordeum vulgare GN=ACL1.1 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.938e-23 Identity = 65/108 (60.19%), Postives = 75/108 (69.44%), Query Frame = 3 Query: 210 SFPSLRMR-SAPRFRVSCAA------KPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETKSA 512 SF S+ R S+ RF++ CAA K ETVDKVC IVKKQLA+P T VT ESKF+ LGADSLDTVEIVMGL SAQ I+TVQDAA+LIEKL+ K+A Sbjct: 42 SFVSISSRPSSLRFKICCAAMGEAQAKKETVDKVCMIVKKQLAVPDGTPVTAESKFSELGADSLDTVEIVMGLEEEFNITVDETSAQDIATVQDAANLIEKLVTEKTA 149
BLAST of CX291389 vs. ExPASy Swiss-Prot
Match: ACP3_HORVU (Acyl carrier protein 3, chloroplastic OS=Hordeum vulgare GN=ACL1.3 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22 Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 222 LRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETKSA 512 LR++ P RF V C+AK +TV+KVC+IVKKQLA+P T V G +KF+ LGADSLDTVEIVMGL SAQ I+TV+DAA LI+KL+ KS+ Sbjct: 35 LRLQPVPMRFAVCCSAKQDTVEKVCEIVKKQLAVPEGTEVCGTTKFSDLGADSLDTVEIVMGLEEEFQISVEETSAQAIATVEDAATLIDKLVSAKSS 132
BLAST of CX291389 vs. ExPASy Swiss-Prot
Match: ACP2_HORVU (Acyl carrier protein 2, chloroplastic OS=Hordeum vulgare GN=ACL1.2 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 58/94 (61.70%), Postives = 67/94 (71.28%), Query Frame = 3 Query: 219 SLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLI 497 S R++ P RF V CAAK ETV+KVC IVK QLAL DT V+G S FA LGADSLDTVEIVMGL SAQTI+TV+DAA+LI+ L+ Sbjct: 34 SFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSSTFADLGADSLDTVEIVMGLEEAFGISVEESSAQTIATVEDAANLIDSLV 127
BLAST of CX291389 vs. ExPASy Swiss-Prot
Match: ACP_BRACM (Acyl carrier protein SF2, chloroplastic OS=Brassica campestris GN=Acl1.1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21 Identity = 55/96 (57.29%), Postives = 68/96 (70.83%), Query Frame = 3 Query: 219 SLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 506 +LR RF +SCAAKPETV+KV +IVKKQL+L D V E+KFA LGADSLDTVEIVMGL AQ I+TV++AA+LIE+L++ K Sbjct: 38 NLRRSIPTRFSISCAAKPETVEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDTVEIVMGLEEEFDIEMAEEKAQKIATVEEAAELIEELVQLK 133
BLAST of CX291389 vs. ExPASy Swiss-Prot
Match: ACP2_BRANA (Acyl carrier protein, chloroplastic OS=Brassica napus GN=ACL1.A2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21 Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 3 Query: 219 SLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 506 +LR R VSCAAKPETV+KV +IVKKQL+L D V E+KFA LGADSLDTVEIVMGL AQ I+TV++AA+LIE+L++ K Sbjct: 38 NLRRSIPTRLSVSCAAKPETVEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDTVEIVMGLEEEFDIEMAEEKAQKIATVEEAAELIEELVQAK 133 The following BLAST results are available for this feature:
BLAST of CX291389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291389 ID=CX291389; Name=CX291389; organism=Citrus clementina; type=EST; length=702bpback to top |