CX291391

Overview
NameCX291391
Unique NameCX291391
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13556 contig Ccv1_Contig13556:481..1097. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291391 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.521e-36
Identity = 82/175 (46.86%), Postives = 112/175 (64.00%), Query Frame = 2
Query:    8 KWKIGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLSALVEGRLGGPGLDVFENEPHVPEELFGLENEVLMPHVGSGTAETRKTMADLVLGNLEA 523
            KW +G Y+L     GKT+GI+G GRIG A+A+RA+ F+  I YYSRT K   + +    Y  + E+      +++A PLT+ET ++IN E +  + P  +L+NI RG  VD + L+ AL EG + G GLDVFE EP+  EELF L+N VL PH+GS T E R+ MA+LV  NL A
Sbjct:  141 KWFLG-YELY----GKTIGIVGFGRIGQAIARRAKGFNMRILYYSRTRKSQAEKELGAEYRPLEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEPYYNEELFSLDNVVLTPHIGSATFEAREAMAELVARNLIA 310          
BLAST of CX291391 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.827e-35
Identity = 81/162 (50.00%), Postives = 103/162 (63.58%), Query Frame = 2
Query:   50 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLSALVEGRLGGPGLDVFENEPHVPEELFGLENEVLMPHVGSGTAETRKTMADLVLGNLEA 523
            GKT+GIIG GRIG AVA+RA+ F   I YYSRT KP     LK ++ P + EL      +V+A PLT+ET H+I    +  + P  +L+NI RG  VD   L+ AL EG + G GLDVFE EP+  EELF L+N +L PH+GS T   R+ MA+LV  NL A
Sbjct:  150 GKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEAEEELKAEFKP-LEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEPYYNEELFSLKNVILAPHIGSATFGAREGMAELVARNLIA 310          
BLAST of CX291391 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 4.231e-34
Identity = 79/161 (49.07%), Postives = 103/161 (63.98%), Query Frame = 2
Query:   50 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLSALVEGRLGGPGLDVFENEPHVPEELFGLENEVLMPHVGSGTAETRKTMADLVLGNLEA 523
            GKT+GIIGLGRIG A+AKRA+ F+  I YYSRT K  ++ +    +  + +L      +V+A PLT ET H+IN E +  +    +LINI RG  VD   L+ AL EG + G GLDVFE EP+  EELF L+N VL PH+GS +   R+ MA+LV  NL A
Sbjct:  150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIA 310          
BLAST of CX291391 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.526e-34
Identity = 77/161 (47.83%), Postives = 101/161 (62.73%), Query Frame = 2
Query:   50 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLSALVEGRLGGPGLDVFENEPHVPEELFGLENEVLMPHVGSGTAETRKTMADLVLGNLEA 523
            GKT+GIIG GRIG A+AKRA  F   I YYSRT KP ++ +    +  + EL      +V+A PL +ET H+IN E +  +    +LIN+ RG  +D + L+ AL EG + G GLDV+E EP+  EELF L+N VL PH+GS T   R+ MA LV  NL A
Sbjct:  151 GKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIA 311          
BLAST of CX291391 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 9.426e-34
Identity = 76/161 (47.20%), Postives = 102/161 (63.35%), Query Frame = 2
Query:   50 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLSALVEGRLGGPGLDVFENEPHVPEELFGLENEVLMPHVGSGTAETRKTMADLVLGNLEA 523
            G+T+GI+G GRIG A+A+RA+ F   I Y SRT KP ++ +    +  + EL      +V+  PLT+ET H+IN E +  + P  +L+NI RG  VD   L+ AL EG + G GLDVFE EP+  EELF L+N VL PH+GS T   R+ MA+LV  NL A
Sbjct:  150 GRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTRKPEVEKELGAEFMPLDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEPYYHEELFSLDNVVLAPHIGSATYGAREGMAELVARNLIA 310          
BLAST of CX291391 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 9.426e-34
Identity = 76/161 (47.20%), Postives = 104/161 (64.60%), Query Frame = 2
Query:   50 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLSALVEGRLGGPGLDVFENEPHVPEELFGLENEVLMPHVGSGTAETRKTMADLVLGNLEA 523
            GKT+GI+G GRIG AVA+RA  F   I YYSR+ KP  + +    + S+ +L      +V+A PLT+ET+++IN E +  +    +L+NI RG  VD + L+ AL EG + G GLDV+E EP+  EELF L+N VL PH+GS T   R+ MA+LV  NL A
Sbjct:  150 GKTIGIVGFGRIGQAVARRARGFGMRILYYSRSRKPEAEKELGAEFRSLEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEPYYNEELFSLKNVVLAPHIGSATYGAREGMAELVARNLIA 310          
BLAST of CX291391 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.608e-33
Identity = 81/178 (45.51%), Postives = 106/178 (59.55%), Query Frame = 2
Query:   50 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVE---LASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLSALVEGRLGGPGLDVFENEPHVPEELFGLENEVLMPHVGSGTAETRKTMADLVLGNLEA--------HFLNKPLLT 550
            GKT+GI+G GRIG A+AKRA+ F   I YYSRT KP  + +     V+   L      + +  PLT+ET H+I  + +  + P  +LIN  RG  VD   L+ AL EG + G GLDVFE EP+  EELF L+N VL PH+GS T E R+ MA+LV  NL A        + +NK +LT
Sbjct:  150 GKTLGIVGFGRIGQALAKRAKGFGMKIIYYSRTRKPEAEEEIGAEYVDFETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEPYYNEELFKLKNVVLAPHIGSATHEAREGMAELVAKNLIAFAKGEIPPNLVNKDVLT 327          
BLAST of CX291391 vs. ExPASy Swiss-Prot
Match: GHRB_YERPY (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ghrB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.557e-28
Identity = 75/178 (42.13%), Postives = 104/178 (58.43%), Query Frame = 2
Query:    5 GKWK--IGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLSALVEGRLGGPGLDVFENEP-HVPEELFGLENEVLMPHVGSGTAETRKTMADLVLGNL 517
            G+W+  IGD         KT+GI+G+GRIGMA+A+RA   FS P+ Y SR      + ++   + S+  L +    L +  P+TE+T H+I RE +  +    +LIN GRGP VDE+ L++AL +G +   GLDVFE EP  V   L  L N V +PH+GS T ETR  MA   + NL
Sbjct:  128 GEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKIKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305          
BLAST of CX291391 vs. ExPASy Swiss-Prot
Match: GHRB_YERPS (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis GN=ghrB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.557e-28
Identity = 75/178 (42.13%), Postives = 104/178 (58.43%), Query Frame = 2
Query:    5 GKWK--IGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLSALVEGRLGGPGLDVFENEP-HVPEELFGLENEVLMPHVGSGTAETRKTMADLVLGNL 517
            G+W+  IGD         KT+GI+G+GRIGMA+A+RA   FS P+ Y SR      + ++   + S+  L +    L +  P+TE+T H+I RE +  +    +LIN GRGP VDE+ L++AL +G +   GLDVFE EP  V   L  L N V +PH+GS T ETR  MA   + NL
Sbjct:  128 GEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305          
BLAST of CX291391 vs. ExPASy Swiss-Prot
Match: GHRB_YERPP (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis (strain Pestoides F) GN=ghrB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.557e-28
Identity = 75/178 (42.13%), Postives = 104/178 (58.43%), Query Frame = 2
Query:    5 GKWK--IGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLSALVEGRLGGPGLDVFENEP-HVPEELFGLENEVLMPHVGSGTAETRKTMADLVLGNL 517
            G+W+  IGD         KT+GI+G+GRIGMA+A+RA   FS P+ Y SR      + ++   + S+  L +    L +  P+TE+T H+I RE +  +    +LIN GRGP VDE+ L++AL +G +   GLDVFE EP  V   L  L N V +PH+GS T ETR  MA   + NL
Sbjct:  128 GEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNL 305          
The following BLAST results are available for this feature:
BLAST of CX291391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
GYAR_PYRFU4.521e-3646.86Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_THEGJ3.827e-3550.00Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_PYRHO4.231e-3449.07Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_PYRAB5.526e-3447.83Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_THEON9.426e-3447.20Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_PYRKO9.426e-3447.20Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_THELI1.608e-3345.51Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GHRB_YERPY1.557e-2842.13Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPS1.557e-2842.13Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPP1.557e-2842.13Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionC03007D10SK OF2 Citrus clementina cDNA clone C03007D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291391 ID=CX291391; Name=CX291391; organism=Citrus clementina; type=EST; length=616bp
AAGGGGGAAGTGGAAGATTGGGGATTATAAGCTGACCACTAAGTTCACTG
GAAAAACAGTTGGCATTATTGGGCTAGGAAGAATTGGCATGGCAGTTGCT
AAGAGAGCTGAAGCATTTAGCTGCCCAATCAACTACTACTCTAGAACAGA
GAAACCAAATTTGAAATACAAATACTACCCTAGTGTAGTTGAGTTGGCCT
CCAACTGTCACATTCTGGTCGTTGCATGCCCACTAACAGAAGAGACCCGC
CATATCATTAATCGTGAAGTCATTGATGCTTTGGGACCAAAAGGTGTTCT
CATCAACATTGGGAGGGGTCCTCACGTGGATGAACGTGAACTGTTGTCTG
CACTGGTTGAAGGCCGATTAGGCGGACCTGGGCTCGATGTGTTTGAAAAT
GAGCCTCATGTACCTGAGGAGCTCTTTGGTCTAGAAAATGAGGTCCTTAT
GCCACATGTAGGAAGTGGCACAGCGGAAACCCGCAAAACCATGGCTGACC
TTGTACTTGGGAATTTGGAAGCTCATTTTCTGAACAAACCGCTGCTTACT
CCAGTAGTTTGATTGTTTCATGAAAGATGCAAGTTTAAGACCGATTGAAG
GCTCCATCCTGCTGCT
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