CX291395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.042e-48 Identity = 104/173 (60.12%), Postives = 133/173 (76.88%), Query Frame = -2 Query: 195 QKHELNVSTYQMCVLMLFNSVDRLSYKEIEQATEIPAPELKRCLQSLACVKG-KHVLRKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVA-QRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVD 707 +KH L VST+QM +LMLFN+ D+ +++EI+Q T+IP EL R LQSLAC K + VL KEP SK+I F ND+FTSK +VKI TV A Q ES+PE +ETRQ+V++DRK +IEAAIVRIMK+R+ + HN +V EVT+QL++RFLP+PVVIKKRIE LIERE+L R D Sbjct: 588 RKHILQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPED 760
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.031e-48 Identity = 103/173 (59.54%), Postives = 133/173 (76.88%), Query Frame = -2 Query: 195 QKHELNVSTYQMCVLMLFNSVDRLSYKEIEQATEIPAPELKRCLQSLACVKG-KHVLRKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVA-QRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVD 707 +KH L VST+QM +LMLFN+ ++ +++EI+Q T+IP EL R LQSLAC K + VL KEP SK+I F ND+FTSK +VKI TV A Q ES+PE +ETRQ+V++DRK +IEAAIVRIMK+R+ + HN +V EVT+QL++RFLP+PVVIKKRIE LIERE+L R D Sbjct: 588 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPED 760
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL3_MOUSE (Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.031e-48 Identity = 103/173 (59.54%), Postives = 133/173 (76.88%), Query Frame = -2 Query: 195 QKHELNVSTYQMCVLMLFNSVDRLSYKEIEQATEIPAPELKRCLQSLACVKG-KHVLRKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVA-QRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVD 707 +KH L VST+QM +LMLFN+ ++ +++EI+Q T+IP EL R LQSLAC K + VL KEP SK+I F ND+FTSK +VKI TV A Q ES+PE +ETRQ+V++DRK +IEAAIVRIMK+R+ + HN +V EVT+QL++RFLP+PVVIKKRIE LIERE+L R D Sbjct: 588 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPED 760
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL3_HUMAN (Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 3.031e-48 Identity = 103/173 (59.54%), Postives = 133/173 (76.88%), Query Frame = -2 Query: 195 QKHELNVSTYQMCVLMLFNSVDRLSYKEIEQATEIPAPELKRCLQSLACVKG-KHVLRKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVA-QRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVD 707 +KH L VST+QM +LMLFN+ ++ +++EI+Q T+IP EL R LQSLAC K + VL KEP SK+I F ND+FTSK +VKI TV A Q ES+PE +ETRQ+V++DRK +IEAAIVRIMK+R+ + HN +V EVT+QL++RFLP+PVVIKKRIE LIERE+L R D Sbjct: 588 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPED 760
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.031e-48 Identity = 103/173 (59.54%), Postives = 133/173 (76.88%), Query Frame = -2 Query: 195 QKHELNVSTYQMCVLMLFNSVDRLSYKEIEQATEIPAPELKRCLQSLACVKG-KHVLRKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVA-QRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVD 707 +KH L VST+QM +LMLFN+ ++ +++EI+Q T+IP EL R LQSLAC K + VL KEP SK+I F ND+FTSK +VKI TV A Q ES+PE +ETRQ+V++DRK +IEAAIVRIMK+R+ + HN +V EVT+QL++RFLP+PVVIKKRIE LIERE+L R D Sbjct: 588 RKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPED 760
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.116e-42 Identity = 100/204 (49.02%), Postives = 128/204 (62.75%), Query Frame = -2 Query: 195 QKHELNVSTYQMCVLMLFNSVDRLSYKEIEQATEIPAPELKRCLQSLACVKGKHVLRKEPM---------------------------------SKDIAEDDAFFFNDKFTSKFVKVKIGTVVAQRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVD 707 + HEL VS+YQM +L+LFN +L++KEI T IP +LKR L +L K K + R+ P SK I E D F FN KF SK +VK+ VV Q+E+ E +ETR +V+EDRK QIEA+IVRIMKAR+ L+H+N+V+EV KQLQSRF+PNPV++KKRIESLIERE+LER K D Sbjct: 559 KSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIPTIDLKRNLLALTNPKNKILDRELPSTTSSTTTTTTTATSSSTSTSPSSSSSSISTPTPSKSIDESDVFAFNTKFKSKLFRVKVMAVV-QKETPVEEKETRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQD 761
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL3_CAEEL (Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.781e-40 Identity = 88/169 (52.07%), Postives = 121/169 (71.60%), Query Frame = -2 Query: 195 LNVSTYQMCVLMLFNSVDRLSYKEIEQATEIPAPELKRCLQSLACVKGKH--VLRKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVAQRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKVD 695 L V+T+QM +L+ FN +R+S +++ +IP ELKR LQSLA K ++RK I D F ND F SK +VK+ V + ESEPE +ETRQ+VE+DRK ++EAAIVRIMKAR+ L+HNN+V EVT+QL+ RF+P+P++IK+RIE+LIERE+L RD+ D Sbjct: 601 LQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHD 769
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL3_SCHPO (Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.540e-36 Identity = 79/173 (45.66%), Postives = 117/173 (67.63%), Query Frame = -2 Query: 207 KGQKHELNVSTYQMCVLMLFNSVDR---LSYKEIEQATEIPAPELKRCLQSLACVKGKHVLRKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVAQR-ESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLER 713 K +K++LNVST +L+LF + L ++EI + T I +LKR LQSLAC K K +L K+P +++ D F+FN+ F S ++KI TV R E + E + T ++V+E RK Q +A IVR+MK R+V +HN ++ EVT+QL RF P+P++IK+RIE+LIERE+L+R Sbjct: 602 KDRKYDLNVSTIASVILLLFQDLKENQCLIFEEILEKTNIEVGDLKRNLQSLACAKYK-ILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQR 773
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 3.253e-34 Identity = 84/171 (49.12%), Postives = 111/171 (64.91%), Query Frame = -2 Query: 201 KGQKHELNVSTYQMCVLMLFNSVDRLSYKEIEQATEIPAPELKRCLQSLACVKGKHVLRKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVAQRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDK 713 K K EL VS +Q VL++FN + S +EI+QAT I EL+R LQSLAC K + VL K P KDI + D F ND F K ++KI + +E+ E T +RV +DR+ QI+AAIVRIMK R+ L HN +V+EV QL +F P +KKRIESLI+R+++ERDK Sbjct: 719 KEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKAR-VLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQI-QMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQL--KFPVKPADLKKRIESLIDRDYMERDK 885
BLAST of CX291395 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 1.367e-32 Identity = 80/171 (46.78%), Postives = 111/171 (64.91%), Query Frame = -2 Query: 201 KGQKHELNVSTYQMCVLMLFNSVDRLSYKEIEQATEIPAPELKRCLQSLACVKGKHVLRKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVAQRESEPENQETRQRVEEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDK 713 K K E VS +Q VL++FN D S++EI+ AT I EL+R LQSLAC K + VL K P K++ + D F FN +F K ++KI + +E+ E T +RV +DR+ QI+AAIVRIMK R+ L HN +V+E+ QL +F P +KKRIESLI+R+++ERDK Sbjct: 583 KEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKAR-VLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQ-IQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQL--KFPVKPGDLKKRIESLIDRDYMERDK 749 The following BLAST results are available for this feature:
BLAST of CX291395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291395 ID=CX291395; Name=CX291395; organism=Citrus clementina; type=EST; length=714bpback to top |