CX291398

Overview
NameCX291398
Unique NameCX291398
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10210 contig Ccv1_Contig10210:31..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.806e-74
Identity = 137/176 (77.84%), Postives = 146/176 (82.95%), Query Frame = 2
Query:  122 VAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            V +  S+S KDY DPPPEPLFDA EL KWSFYRALIAEFIA            IGYKSQTDPA N D C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKV+LVRAVMYMVAQCLGAI GV LVKAFQ +Y+TRYGGGAN L+DGYS G G+AAEIIGTFVLV
Sbjct:    6 VGDKRSFSGKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLV 181          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.144e-71
Identity = 135/186 (72.58%), Postives = 145/186 (77.96%), Query Frame = 2
Query:  104 MAKD--TGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            MAKD      E G +SAKDYTDPPP PL D  ELTKWS YRA+IAEFIA            IGYK Q+D   N     C+GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RAV+Y++AQCLGAI GVGLVK FQ SYY RYGGGANEL+DGYS G GL AEIIGTFVLV
Sbjct:    1 MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLV 186          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 8.775e-71
Identity = 135/187 (72.19%), Postives = 147/187 (78.61%), Query Frame = 2
Query:  104 MAKD---TGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            MAKD      AE G Y AKDY+DPPP PL DA ELTKWS YRA+IAEF+A            IGYK Q+DP  N     C+GVGILGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGLFLARKVSLVRAV+Y+VAQ LGAI GVGLVK FQ ++Y RYGGGANEL+DGYS G GLAAEIIGTFVLV
Sbjct:    1 MAKDIEAAAAAEGGEYMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLV 187          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.497e-70
Identity = 133/176 (75.57%), Postives = 143/176 (81.25%), Query Frame = 2
Query:  128 EHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            E G +SAKDYTDPPP PL DA ELTKWS YRA+IAEFIA            IGYK QTD A +     C GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSLVRA++Y++AQCLGAI GVGLVK FQ +YY RYGGGANEL+DGYS G GLAAEIIGTFVLV
Sbjct:   12 EAGEFSAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLV 187          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.955e-70
Identity = 135/186 (72.58%), Postives = 148/186 (79.57%), Query Frame = 2
Query:  104 MAKDTGVA--EHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            MAKD   +  E G +SAKDYTDPPP PL DA ELT+WS YRA+IAEFIA            IGYK QTD + +     C GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSLVRA++Y++AQCLGAI GVGLVK FQ +YY RYGGGANEL+DGYS G GLAAEIIGTFVLV
Sbjct:    1 MAKDIEASGPEAGEFSAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLV 186          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 2.161e-69
Identity = 132/182 (72.53%), Postives = 141/182 (77.47%), Query Frame = 2
Query:  104 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            MAKD    E   +  +DY DPPP P FDA ELTKWS YRA+IAEF+A            IGYK Q+D       C GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RAV+YMVAQCLGAI GVG VKAFQ SYY RYGGGAN LADGY+TG GLAAEIIGTFVLV
Sbjct:    1 MAKDVEGPE--GFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLV 180          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.687e-69
Identity = 131/182 (71.98%), Postives = 139/182 (76.37%), Query Frame = 2
Query:  104 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            MAKD  V E G  +A+DY DPPP P FD  EL KW  YRA+IAEF+A            IGYK+QTD       C GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARKVSLVR V+Y+VAQCLGAI G G VKAFQ SYYTRYGGGANELADGY+ G GL AEIIGTFVLV
Sbjct:    1 MAKDLDVNESGPPAARDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLV 182          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 8.213e-69
Identity = 128/182 (70.33%), Postives = 138/182 (75.82%), Query Frame = 2
Query:  104 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            MAKD        +  +DY DPPP P  D  EL KWSFYRA+IAEF+A            IGYK Q+D       C GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL RA++Y++AQCLGAI GVG VKAFQ SYYTRYGGGAN LADGYSTG GLAAEIIGTFVLV
Sbjct:    1 MAKDVEAVPGEGFQTRDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLV 182          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.323e-68
Identity = 130/182 (71.43%), Postives = 140/182 (76.92%), Query Frame = 2
Query:  104 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            MAKD  V     +  +DY DPPP P FDA ELTKWS YRA+IAEF+A            IGYK Q+D       C GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RAV+YMVAQCLGAI GVG VKAFQ S+Y  YGGGAN LADGY+TG GLAAEIIGTFVLV
Sbjct:    1 MAKD--VEGPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLV 180          
BLAST of CX291398 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 9.080e-68
Identity = 132/189 (69.84%), Postives = 144/189 (76.19%), Query Frame = 2
Query:  104 MAKDTGV---AEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDG----CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLV 649
            M KD  V   A  G ++AKDYTDPPP PL DA EL  WS YRA+IAEFIA            IGYK QTD + +  G    C GVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRA++YMVAQCLGA+ GVGLVKAFQ +Y+ RYGGGAN LA GYS G GL AEI+GTFVLV
Sbjct:    1 MGKDDVVQSGAGGGEFAAKDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLV 189          
The following BLAST results are available for this feature:
BLAST of CX291398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PIP25_ARATH3.806e-7477.84Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP22_ORYSJ5.144e-7172.58Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP23_ORYSJ8.775e-7172.19Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP23_MAIZE1.497e-7075.57Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP24_MAIZE1.955e-7072.58Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP22_ARATH2.161e-6972.53Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP24_ARATH3.687e-6971.98Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP21_ARATH8.213e-6970.33Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP23_ARATH5.323e-6871.43Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP22_MAIZE9.080e-6869.84Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC03007E05SK OF2 Citrus clementina cDNA clone C03007E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291398 ID=CX291398; Name=CX291398; organism=Citrus clementina; type=EST; length=674bp
AAGAAAAAGAAAAAGGAAAAGGCTTCTCTCTCGTTGTGCTTGTGGCTTTG
CAGTGCTCTCAGTTTTCTCTGTTTCTCTCCAAATCATTGTTACTGGTTTT
CCAATGGCGAAGGACACTGGGGTGGCAGAGCACGGCTCATATTCAGCCAA
GGACTACACGGACCCACCGCCGGAGCCGCTATTCGACGCCGTGGAGCTGA
CCAAATGGTCATTCTACAGAGCCTTGATAGCTGAGTTCATAGCAACCCTG
CTCTTTCTTTACGTCACTGTCTTGACTGTCATTGGCTACAAAAGCCAGAC
CGATCCCGCCAAGAACGTCGACGGCTGTGCCGGCGTCGGCATCCTCGGCA
TCGCCTGGGCCTTCGGTGGCATGATCTTTGTCCTCGTTTACTGCACCGCC
GGTATCTCAGGTGGTCACATTAACCCGGCAGTGACGTTCGGACTATTCTT
GGCCCGCAAGGTGTCGTTGGTCCGTGCTGTGATGTACATGGTGGCGCAGT
GCCTTGGTGCTATCTCCGGTGTTGGGTTGGTCAAGGCTTTCCAAAAATCT
TACTACACAAGGTACGGAGGTGGGGCCAACGAGCTGGCCGATGGGTACAG
CACCGGCGTTGGATTGGCCGCCGAGATCATCGGCACCTTTGTCTTGGTTT
AACTGTCTTCTCGGCCACTGATCC
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