CX291399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291399 vs. ExPASy Swiss-Prot
Match: MPPB_ARATH (Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 3.516e-47 Identity = 91/103 (88.35%), Postives = 100/103 (97.09%), Query Frame = 2 Query: 2 KLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 310 KLAYRVS+ADVTRARNQLKSSLLLH+DGTSP+AEDIGRQLLTYGRRIP AELFARID+VDASTVKRVAN++IYD+DIAI+A+GPIQ LPDYN FRRRTYWNRY Sbjct: 429 KLAYRVSDADVTRARNQLKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPDYNKFRRRTYWNRY 531
BLAST of CX291399 vs. ExPASy Swiss-Prot
Match: MPPB_MOUSE (Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.941e-25 Identity = 54/102 (52.94%), Postives = 76/102 (74.51%), Query Frame = 2 Query: 2 KLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNR 307 +L V+E++V RA+N LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+VDA TV+RV ++I+D+ AIAA+GPI+ LPD+N W R Sbjct: 387 RLCTDVTESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAETVRRVCTKYIHDKSPAIAALGPIERLPDFNQICSNMRWIR 488
BLAST of CX291399 vs. ExPASy Swiss-Prot
Match: MPPB_HUMAN (Mitochondrial-processing peptidase subunit beta OS=Homo sapiens GN=PMPCB PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.438e-24 Identity = 53/102 (51.96%), Postives = 75/102 (73.53%), Query Frame = 2 Query: 2 KLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNR 307 +L V+E++V RARN LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A T++ V ++IY+R AIAA+GPI+ LPD+ R W R Sbjct: 387 RLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIKQLPDFKQIRSNMCWLR 488
BLAST of CX291399 vs. ExPASy Swiss-Prot
Match: QCR1_HUMAN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens GN=UQCRC1 PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 1.878e-24 Identity = 52/103 (50.49%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 2 KLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 310 +L +E++V R +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDAS V+ + +++IYD+ A+A GPI+ LPDYN R +W R+ Sbjct: 378 RLCTSATESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 480
BLAST of CX291399 vs. ExPASy Swiss-Prot
Match: MPPB_RAT (Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus GN=Pmpcb PE=1 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 2.452e-24 Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 2 Query: 2 KLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNR 307 +L VSE++V RA+N LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+VDA V+ V ++IY + AIAA+GPI+ LPD+N W R Sbjct: 387 RLCTAVSESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAEMVREVCTKYIYGKSPAIAALGPIERLPDFNQICSNMRWTR 488
BLAST of CX291399 vs. ExPASy Swiss-Prot
Match: MPPB_BLAEM (Mitochondrial-processing peptidase subunit beta OS=Blastocladiella emersonii GN=MPP1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.183e-24 Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 2 KLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 310 +LA SE +V A+ QLK+SLLL +DGT+PVAE+IGRQ+L YGRR+ E+ +D+V VKRVAN FIYDRD+AI A+GP++ LPDYN R RY Sbjct: 363 RLATAPSEGEVAIAKQQLKTSLLLALDGTTPVAEEIGRQMLAYGRRLSPFEIDRLVDAVTVEDVKRVANEFIYDRDLAIVAVGPVECLPDYNRIRSAMNLLRY 465
BLAST of CX291399 vs. ExPASy Swiss-Prot
Match: QCR1_RAT (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.318e-24 Identity = 51/103 (49.51%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 2 KLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 310 +L +E++VTR +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI+ VDA V+ V +++ YD+ A+A GPI+ L DYN R +W R+ Sbjct: 378 RLCTSATESEVTRGKNILRNALISHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIEEVDAQMVREVCSKYFYDQCPAVAGYGPIEQLSDYNRIRSGMFWLRF 480
BLAST of CX291399 vs. ExPASy Swiss-Prot
Match: MPPB_PONAB (Mitochondrial-processing peptidase subunit beta OS=Pongo abelii GN=PMPCB PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.318e-24 Identity = 52/102 (50.98%), Postives = 74/102 (72.55%), Query Frame = 2 Query: 2 KLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNR 307 +L V+E++V RARN LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A T++ V ++IY+R AIAA+GPI+ LPD+ W R Sbjct: 387 RLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIEQLPDFKQICSNMCWLR 488
BLAST of CX291399 vs. ExPASy Swiss-Prot
Match: QCR1_MOUSE (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.217e-23 Identity = 50/103 (48.54%), Postives = 73/103 (70.87%), Query Frame = 2 Query: 2 KLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 310 +L +E++VTR +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDA ++ + +++ YD+ A+A GPI+ LPDYN R +W R+ Sbjct: 378 RLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 480
BLAST of CX291399 vs. ExPASy Swiss-Prot
Match: QCR1_BOVIN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.217e-23 Identity = 51/103 (49.51%), Postives = 72/103 (69.90%), Query Frame = 2 Query: 2 KLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 310 +L +E++V R +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDA V+ V +++ YD+ A+A GPI+ LPDYN R +W R+ Sbjct: 378 RLCTSATESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYFYDQCPAVAGFGPIEQLPDYNRIRSGMFWLRF 480 The following BLAST results are available for this feature:
BLAST of CX291399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291399 ID=CX291399; Name=CX291399; organism=Citrus clementina; type=EST; length=632bpback to top |