CX291463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291463 vs. ExPASy Swiss-Prot
Match: UBE4_ARATH (Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana GN=PUB1 PE=1 SV=1) HSP 1 Score: 421.779 bits (1083), Expect = 1.735e-117 Identity = 207/231 (89.61%), Postives = 223/231 (96.54%), Query Frame = 3 Query: 3 LKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGE 695 LKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWR+IAK+EEKGVYLNFLNFL+NDSIYLLDESLNKILE+K IEA+MSNTAEWE+RP QERQERTRLFHSQENI+RIDMKLANEDV+MLAFTSE+I APFLLPEM+ERVA+MLNYFLLQLVGPQRKSL+LKDPEKYEFRPKQLLKQIV IYV+LARGDT N+FP AISSDGRSYNEQLF+A ADVL +IGE Sbjct: 679 LKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRRIAKDEEKGVYLNFLNFLVNDSIYLLDESLNKILEIKQIEADMSNTAEWEQRPTQERQERTRLFHSQENIVRIDMKLANEDVTMLAFTSEEITAPFLLPEMVERVANMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKQLLKQIVRIYVNLARGDTVNIFPGAISSDGRSYNEQLFNAGADVLRRIGE 909
BLAST of CX291463 vs. ExPASy Swiss-Prot
Match: UBE4B_MOUSE (Ubiquitin conjugation factor E4 B OS=Mus musculus GN=Ube4b PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39 Identity = 86/232 (37.07%), Postives = 138/232 (59.48%), Query Frame = 3 Query: 3 LKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHL--ARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIG 692 +K Y D+E TG+ ++FYDKF IR++I+ + + LWQ +H + + ++ ++ ++N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R E + R + LA E V M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L AR F AI+ D RSY+++LF + K G Sbjct: 842 MKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCAR------FAKAIADDQRSYSKELFEEVISKMRKAG 1065
BLAST of CX291463 vs. ExPASy Swiss-Prot
Match: UBE4B_HUMAN (Ubiquitin conjugation factor E4 B OS=Homo sapiens GN=UBE4B PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39 Identity = 86/232 (37.07%), Postives = 138/232 (59.48%), Query Frame = 3 Query: 3 LKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHL--ARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIG 692 +K Y D+E TG+ ++FYDKF IR++I+ + + LWQ +H + + ++ ++ ++N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R E + R + LA E V M ++Q+ PFL PE+ R+A+MLN+ L QL GP+ + L +++PEKY F PK+LL Q+ IY+ L AR F AI+ D RSY+++LF + K G Sbjct: 971 MKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCAR------FAKAIADDQRSYSKELFEEVISKMRKAG 1194
BLAST of CX291463 vs. ExPASy Swiss-Prot
Match: UBE4A_RAT (Ubiquitin conjugation factor E4 A OS=Rattus norvegicus GN=Ube4a PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.578e-38 Identity = 88/238 (36.97%), Postives = 141/238 (59.24%), Query Frame = 3 Query: 3 LKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGE 695 +K++VDIEFTG QF KFN R + +L Y+W S+R + + +A K + +L FLN L+ND+I+LLDE++ + ++K+ + E + EWE + R+E+ + R ++NE + L+F + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL KI + Sbjct: 723 IKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWESLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLSFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINK 956
BLAST of CX291463 vs. ExPASy Swiss-Prot
Match: UBE4A_BOVIN (Ubiquitin conjugation factor E4 A OS=Bos taurus GN=UBE4A PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.673e-38 Identity = 87/238 (36.55%), Postives = 142/238 (59.66%), Query Frame = 3 Query: 3 LKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGE 695 +K++VDIEFTG QF KFN R + +L+Y+W ++R + + +A K + +L FLN L+ND+I+LLDE++ + ++K+ + E + EW+ + R+E+ + R ++NE + LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL KI + Sbjct: 723 IKVFVDIEFTGDPHQFEQKFNYRRPMYPILKYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWDNLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINK 956
BLAST of CX291463 vs. ExPASy Swiss-Prot
Match: UBE4A_PONAB (Ubiquitin conjugation factor E4 A OS=Pongo abelii GN=UBE4A PE=2 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 7.970e-38 Identity = 87/238 (36.55%), Postives = 141/238 (59.24%), Query Frame = 3 Query: 3 LKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGE 695 +K++VDIEFTG QF KFN R + +L Y+W ++R + + +A K + +L FLN L+ND+I+LLDE++ + ++K+ + E + EW+ + R+E+ + R ++NE + LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL KI + Sbjct: 723 IKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWDSLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINK 956
BLAST of CX291463 vs. ExPASy Swiss-Prot
Match: UBE4A_HUMAN (Ubiquitin conjugation factor E4 A OS=Homo sapiens GN=UBE4A PE=1 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 7.970e-38 Identity = 87/238 (36.55%), Postives = 141/238 (59.24%), Query Frame = 3 Query: 3 LKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWKIGE 695 +K++VDIEFTG QF KFN R + +L Y+W ++R + + +A K + +L FLN L+ND+I+LLDE++ + ++K+ + E + EW+ + R+E+ + R ++NE + LAF + +I + F+ P + ER+ SMLNYFL LVGP+ +L +KD +++F+P+QL+ I IY++L GD +N F A + DGRSY+ LF+ VL KI + Sbjct: 723 IKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWDSLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNL--GDEEN-FCATVPKDGRSYSPTLFAQTVRVLKKINK 956
BLAST of CX291463 vs. ExPASy Swiss-Prot
Match: UFD2_YEAST (Ubiquitin conjugation factor E4 OS=Saccharomyces cerevisiae GN=UFD2 PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34 Identity = 85/231 (36.80%), Postives = 138/231 (59.74%), Query Frame = 3 Query: 3 LKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLW-QVPSHRNA--WRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWE--RRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVL 680 L YV +E TGS +QFYDKFN R++I+ +LE L+ ++PS++N W+ + ++ F ++ND +LLDE L+ + E+ I+ E+ N A R ++++ +TRL + + LA++ + + S+ I A F+ PE++ R+ASMLNY L LVGP+ L +KDP+ Y F PK LLK + +Y++L+ Q+ F +A++ D RS+N LF A D+L Sbjct: 619 LDFYVIVEKTGSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQS---QNNADFFVRFDARMLNDLTFLLDEGLSNLAEVHNIQNELDNRARGAPPTREEEDKELQTRLASASRQA-KSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNPKDLLKALTTVYINLSE---QSEFISAVAKDERSFNRNLFVRAVDIL 842
BLAST of CX291463 vs. ExPASy Swiss-Prot
Match: UFD2_SCHPO (Ubiquitin conjugation factor E4 OS=Schizosaccharomyces pombe GN=ufd2 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.102e-30 Identity = 75/230 (32.61%), Postives = 130/230 (56.52%), Query Frame = 3 Query: 3 LKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV--YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWK 686 + Y++IE TG TQFYDKFNIR I E+ +W+ P++ + ++ +E++ + ++ F+ ++ND+ YLLDE+L K+ E+ +++ +++ Q QE + E +L NE + ML + I F E+++R+A+MLNY L L GP+ +L ++DP KY F K LL I +Y++L + F A++ DGRSY++++F A ++ K Sbjct: 673 MAFYIEIESTGQSTQFYDKFNIRFYICEVFRTIWKQPAY---FGKLEQEQKTNLPFFVKFVALMLNDATYLLDEALLKLTEIHNLQSLLADAIS-NSNSNQNVQESQSNLAAAERQASTYCQLGNETIFMLKLFTSSIPKAFCAVEIVDRLAAMLNYNLQALCGPKCSNLKVEDPTKYHFNAKTLLSIIFDVYLNLC---NEPAFVEAVAHDGRSYSKEIFERATSIMTK 895
BLAST of CX291463 vs. ExPASy Swiss-Prot
Match: UBE4_CAEEL (Probable ubiquitin conjugation factor E4 OS=Caenorhabditis elegans GN=ufd-2 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.840e-24 Identity = 64/228 (28.07%), Postives = 121/228 (53.07%), Query Frame = 3 Query: 3 LKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVCIYVHLARGDTQNLFPAAISSDGRSYNEQLFSAAADVLWK 686 +K Y D E G FY+KFN+R NI +LE + + ++ + +A+E ++ F+N +IND+ + +DESL+ + + +E +M+N EW+ + R + ++ + ++ + A ++ +L + PF P + ER+A+MLN+ L QL+G + L +KDP Y + P++ + ++ IY+ L F I+ D R+Y+ + F A + + K Sbjct: 651 IKFYSDFEDNGD---FYEKFNVRGNIQYMLEKMEEDMFYKGKFMDMARECG-AEFIRFVNMVINDATWCIDESLSGLKSIHDVEKKMANKVEWDNTDQEIRNQDLGVYEEAKRKVKGWLGTAKSNLKLLLSITVNSPEPFRTPVLGERLAAMLNHNLSQLIGSKASELKVKDPRSYGWEPREFVSLLISIYLKL----NMPAFVKYIAYDERTYSPEFFHNAIECMRK 870 The following BLAST results are available for this feature:
BLAST of CX291463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291463 ID=CX291463; Name=CX291463; organism=Citrus clementina; type=EST; length=696bpback to top |