CX291468

Overview
NameCX291468
Unique NameCX291468
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length619
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:56..674. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_ARATH (Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.444e-58
Identity = 118/173 (68.21%), Postives = 139/173 (80.35%), Query Frame = 3
Query:   99 TAIQTPQPAVSDNTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            +A +   PA ++ +      FN+LI+ LI RVDL+E EA++SL++LLNEA+EALISAFLVLLRAKGET+ EIVGLARAM+K+A KVEGL DAVDIVGTGGDGANTVNISTG+SILAAACGAKVAKQ            DVLEALGVV+DL PEG++RCV+E GIGFMMS  YH
Sbjct:   88 SAAEALPPACANASPSSIKSFNQLIETLIDRVDLSETEAESSLEFLLNEANEALISAFLVLLRAKGETYEEIVGLARAMMKHARKVEGLVDAVDIVGTGGDGANTVNISTGSSILAAACGAKVAKQGNRSSSSACGSADVLEALGVVLDLGPEGIKRCVEEGGIGFMMSPMYH 260          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_ACIC1 (Anthranilate phosphoribosyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=trpD PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.042e-32
Identity = 77/157 (49.04%), Postives = 105/157 (66.88%), Query Frame = 3
Query:  150 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            TP + E++  L++R DLTEAEA  ++  +++ EA +A I+AF V LRAKGE+  E+ GL+  M+  A  V  +G+A+DIVG+GGD A+TVNIST A+I+AAA G  VAK             D+LEALGV IDLD  GV RC++ AGIGF  +  +H
Sbjct:    5 TPSWPEVLSALLARRDLTEAEAAWAMHQIMSGEATDAQIAAFAVALRAKGESAEEVSGLSSVMLALAAPVPPIGEALDIVGSGGDRAHTVNISTMAAIVAAATGVVVAKHGNRAASSACGSADLLEALGVAIDLDGAGVARCIERAGIGFCFAPVFH 161          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAD (Anthranilate phosphoribosyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.138e-29
Identity = 73/152 (48.03%), Postives = 94/152 (61.84%), Query Frame = 3
Query:  165 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            E I  +++R DLT+AEA + ++ ++N  A  A I+AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+LD EGV RC+ +AGIGFM + K+H
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMNGTATPAQIAAFLTALHIKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLRDAGIGFMFAPKFH 156          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_CHLSY (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.991e-29
Identity = 73/152 (48.03%), Postives = 93/152 (61.18%), Query Frame = 3
Query:  165 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            E I  +++R DLT+AEA + ++ +++  A  A I AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+LD EGV RC+ EAGIGFM + K+H
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMSGTATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLREAGIGFMFAPKFH 156          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_CHLAA (Anthranilate phosphoribosyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.991e-29
Identity = 73/152 (48.03%), Postives = 93/152 (61.18%), Query Frame = 3
Query:  165 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            E I  +++R DLT+AEA + ++ +++  A  A I AFL  L  KGET  EI G+A  M + AT V   G  +D  GTGGDGA+T NIST A+ +AA  G  VAK             DVLE LGV I+LD EGV RC+ EAGIGFM + K+H
Sbjct:    5 EAIAAVVARRDLTQAEAASVMEEIMSGTATPAQIGAFLTALHMKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLREAGIGFMFAPKFH 156          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_CHLFF (Anthranilate phosphoribosyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.130e-29
Identity = 68/149 (45.64%), Postives = 96/149 (64.43%), Query Frame = 3
Query:  171 IDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            +  ++++  LT  EA++  + +LN +D   I+AFL +L+ +GET  EI G+  A+ K AT V+    A+DIVGTGGD ANTVNISTG++IL+AACG  +AK             DVLEALG+ I++ PE +  C+ E GIGFM +  YH
Sbjct:    6 LQSIMNQSHLTYDEAESVTNLMLNGSDPHQIAAFLAVLKYRGETPTEIAGMVSALQKQATSVDLPFPALDIVGTGGDLANTVNISTGSAILSAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMTPEELLSCIQEVGIGFMFAPIYH 154          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCV (Anthranilate phosphoribosyltransferase OS=Chlamydophila caviae GN=trpD PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.192e-28
Identity = 69/149 (46.31%), Postives = 94/149 (63.09%), Query Frame = 3
Query:  171 IDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            +  ++++  LT  E ++  + +LN AD   I+AFL +L+ +GET  E+ G+  A+ K AT V     A+DIVGTGGD ANTVNISTG++ILAAACG  +AK             DVLEALG+ I++ PE +  CV E GIGFM +  YH
Sbjct:    6 LQSIMNQSHLTYDEVESVTNLMLNGADPHQIAAFLAVLKYRGETPTEVAGMISALQKQATPVNLPFPALDIVGTGGDLANTVNISTGSAILAAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMSPEELLSCVQEVGIGFMFAPIYH 154          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_SACEN (Anthranilate phosphoribosyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.656e-28
Identity = 71/151 (47.02%), Postives = 96/151 (63.58%), Query Frame = 3
Query:  168 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            L+  L++  DL+  +   ++D ++  EA  A ++AF+V LRAKGET  E+ G+A AM+ ++  +E    AVDIVGTGGD + +VNIST ASI+ AA G  V K             DVLEALGV IDL PEGVRRCV++ GIGF  +  +H
Sbjct:   11 LLGHLVAGNDLSAEDTAWAMDLVMTGEATPARVAAFVVALRAKGETPAEVRGMADAMLSHSRPLEIRRRAVDIVGTGGDRSGSVNISTMASIVVAAAGVPVVKHGNRAASSKCGTADVLEALGVAIDLPPEGVRRCVEDLGIGFCFAPVFH 161          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_ARTS2 (Anthranilate phosphoribosyltransferase OS=Arthrobacter sp. (strain FB24) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.545e-27
Identity = 70/151 (46.36%), Postives = 92/151 (60.93%), Query Frame = 3
Query:  168 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            LI  LI+  DLT    + ++D +++ EA  + I+ FLV LR+KGET  EI GL  AM+ +A  V+  G+ +DIVGTGGD  NTVNIST A+++ A  GAKV K             DVLEALGV +DL  E V R  +EAGI F  +  +H
Sbjct:   17 LISALINGADLTADNTEWAMDTIMSGEATPSQIAGFLVALRSKGETVDEIAGLVEAMLAHANPVDIAGEKLDIVGTGGDQLNTVNISTMAALVCAGAGAKVVKHGNRASSSSSGSADVLEALGVRLDLPIERVARNAEEAGITFCFAQVFH 167          
BLAST of CX291468 vs. ExPASy Swiss-Prot
Match: TRPD_BEII9 (Anthranilate phosphoribosyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.116e-26
Identity = 68/154 (44.16%), Postives = 86/154 (55.84%), Query Frame = 3
Query:  159 FNELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 617
            F   I  L +   LT AEA+A+ D +   E   A +  FL+ +R +GET  EI+G   AM     +V+   DA+DIVGTGGDG  T N+ST AS++ AACG  VAK             DVL ALGV   LD  GV  C+  AGIGFMM+  +H
Sbjct:    4 FKPFIAKLATGSSLTRAEAEAAFDQIFAGEVTPAQLGGFLMAMRVRGETVDEIIGAVTAMRARMVRVDAPTDAIDIVGTGGDGHGTFNVSTLASLIVAACGVPVAKHGNRAASSRSGASDVLSALGVRTGLDSAGVEACIRGAGIGFMMAQTHH 157          
The following BLAST results are available for this feature:
BLAST of CX291468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ARATH1.444e-5868.21Anthranilate phosphoribosyltransferase, chloroplas... [more]
TRPD_ACIC11.042e-3249.04Anthranilate phosphoribosyltransferase OS=Acidothe... [more]
TRPD_CHLAD3.138e-2948.03Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CHLSY6.991e-2948.03Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CHLAA6.991e-2948.03Anthranilate phosphoribosyltransferase OS=Chlorofl... [more]
TRPD_CHLFF9.130e-2945.64Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_CHLCV1.192e-2846.31Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_SACEN2.656e-2847.02Anthranilate phosphoribosyltransferase OS=Saccharo... [more]
TRPD_ARTS28.545e-2746.36Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_BEII91.116e-2644.16Anthranilate phosphoribosyltransferase OS=Beijerin... [more]

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Properties
Property NameValue
Genbank descriptionC03009A02SK OF2 Citrus clementina cDNA clone C03009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291468 ID=CX291468; Name=CX291468; organism=Citrus clementina; type=EST; length=619bp
CATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGA
AACTGTCCATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATTAAC
TGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTCAAA
CGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTA
ACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGA
TGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAA
CATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACG
AAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGA
TGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAG
CTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCA
TGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGA
CCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCATGA
TGTCGACAAAGTATCACCC
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