CX291469

Overview
NameCX291469
Unique NameCX291469
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX291469_ssr262 microsatellite CX291469_ssr262:262..273. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 237.269 bits (604), Expect = 6.444e-62
Identity = 115/173 (66.47%), Postives = 135/173 (78.03%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESKSDLFMAKPLHARAMPRLPAELYPA 521
            VG+ RLVQESDIP LNYVKAC+REAFR+HPV PFNVPHV+  D TIAGY +PKGSHV+LSR GLGRNP VW++PL+F P+RH  LA     V LTE +L+FISFS GRRGC+  +LG+ M+VML  RLL GF WS P+  E +DL+ESKSD FMA PL   A PRLPA LYP+
Sbjct:  385 VGRERLVQESDIPKLNYVKACIREAFRLHPVAPFNVPHVALADTTIAGYRVPKGSHVILSRTGLGRNPRVWDEPLRFYPDRH--LATAASDVALTENDLRFISFSTGRRGCIAASLGTAMSVMLFGRLLQGFTWSKPAGVEAVDLSESKSDTFMATPLVLHAEPRLPAHLYPS 555          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.910e-59
Identity = 109/172 (63.37%), Postives = 133/172 (77.33%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESKSDLFMAKPLHARAMPRLPAELYP 518
            VGK RLV ESD+P+LNYVKAC++EAFR+HPV PFN+PH+ST D  + GYFIPKGSHVL+SR G+GRNP VW+ P KF PERH++    +  V+L E +L  ISFS GRRGCMGV +GS MT MLLARL+ GF W     + KID++ESK+DLFMAKPL+A A PRL   +YP
Sbjct:  360 VGKDRLVIESDLPNLNYVKACVKEAFRLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLST---NTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPGKNKIDISESKNDLFMAKPLYAVATPRLAPHVYP 528          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.710e-59
Identity = 112/172 (65.12%), Postives = 130/172 (75.58%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESKSDLFMAKPLHARAMPRLPAELYP 518
            VGK RLVQESDIP LNYVKA LREAFR+HPV  FN+PHV+  DAT+AGY IPKGS VLLSR GLGRNP+VW DPL FKPERH+N      +V LTE +L+FISFS G+RGC   ALG+ +T MLLARLL GF W +P NE +++L ES  D+F+AKPL      RLP  LYP
Sbjct:  371 VGKERLVQESDIPKLNYVKAILREAFRLHPVAAFNLPHVALSDATVAGYHIPKGSQVLLSRYGLGRNPKVWADPLSFKPERHLNECS---EVTLTENDLRFISFSTGKRGCAAPALGTALTTMLLARLLQGFTWKLPENETRVELMESSHDMFLAKPLVMVGELRLPEHLYP 539          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.258e-57
Identity = 110/172 (63.95%), Postives = 129/172 (75.00%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESKSDLFMAKPLHARAMPRLPAELYP 518
            VGK RLVQESDIP LNYVKA LREAFR+HPV  FN+PHV+  D T+AGY IPKGS VLLSR GLGRNP+VW DPL FKPERH+N      +V LTE +L+FISFS G+RGC   ALG+ +T M+LARLL GF W +P NE +++L ES  D+F+AKPL      RLP  LYP
Sbjct:  370 VGKERLVQESDIPKLNYVKAILREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWADPLCFKPERHLNECS---EVTLTENDLRFISFSTGKRGCAAPALGTALTTMMLARLLQGFTWKLPENETRVELMESSHDMFLAKPLVMVGDLRLPEHLYP 538          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.630e-55
Identity = 104/172 (60.47%), Postives = 127/172 (73.84%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESKSDLFMAKPLHARAMPRLPAELYP 518
            VGK R VQESDIP LNYVKA +REAFR+HPV  FN+PHV+  D T+AGY IPKGS VLLSR GLGRNP+VW DPL FKPERH+N      +V LTE +L+FISFS G+RGC   ALG+ +T M+LARLL GF W +  +E +++L ES  D+F++KPL      RL  +LYP
Sbjct:  372 VGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECS---EVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSHDMFLSKPLVLVGELRLSEDLYP 540          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C79F1_ARATH (Dihomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.540e-50
Identity = 94/172 (54.65%), Postives = 120/172 (69.77%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESKSDLFMAKPLHARAMPRLPAELYP 518
            VG+ RLVQESDIP+LNY+KAC RE FRIHP   +   H++  D T+ GYFIPKGSH+ + R GLGRNP++W+DPL +KPERH+       +V L E E++F+SFS GRRGC+GV +G+ M VMLLAR L GF+W +  +   + L E  + L MAKPLH    PRL   LYP
Sbjct:  363 VGRDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPSHLARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYKPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCIGVKVGTIMMVMLLARFLQGFNWKLHQDFGPLSLEEDDASLLMAKPLHLSVEPRLAPNLYP 534          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.067e-48
Identity = 92/172 (53.49%), Postives = 119/172 (69.19%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESKSDLFMAKPLHARAMPRLPAELYP 518
            VGK RLVQESDI +LNY+KAC RE FRIHP   +  PHV+  D T+ GYFIPKGSH+ + R GLGRNP++W+DPL ++PERH+       +V L E E++F+SFS GRRGC+GV +G+ M  M+LAR L GF+W +  +   + L E  + L MAKPL     PRL + LYP
Sbjct:  362 VGKDRLVQESDIRNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLAYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMAMMLARFLQGFNWKLHRDFGPLSLEEDDASLLMAKPLLLSVEPRLASNLYP 533          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.683e-31
Identity = 70/172 (40.70%), Postives = 105/172 (61.05%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESKS-DLFMAKPLHARAMPRLPAELY 515
            +GK R   ESDIP+L Y++A  +EAFR HP  P N+P VS+   TI GY+IPK + + ++   +GR+P+VWE+PL+F PER   L++ + ++E    + + I F  GRR C G  +G  M   +L  L+H FDW +P++   I++ E+    L  A PL A   PRL  ++Y
Sbjct:  338 IGKNRRFIESDIPNLPYLRAICKEAFRKHPSTPLNLPRVSSDACTIDGYYIPKNTRLSVNIWAIGRDPDVWENPLEFIPERF--LSEKNAKIEHRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLIHSFDWKLPNDVVDINMEETFGLALQKAVPLEAIVTPRLSFDIY 507          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.920e-30
Identity = 66/172 (38.37%), Postives = 102/172 (59.30%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESKS-DLFMAKPLHARAMPRLPAELY 515
            +G  R + ESDIP+L Y++A  +E FR HP  P N+P +S     + GY+IPK + + ++   +GR+PEVWE+PL+F PER   L+  + +++    + + I F  GRR C G  +G  M   +L  L+H FDW +PS   ++++ E+    L  A PL A   PRLP ++Y
Sbjct:  335 IGNNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPEVWENPLEFYPERF--LSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAMVTPRLPIDVY 504          
BLAST of CX291469 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.892e-29
Identity = 64/172 (37.21%), Postives = 102/172 (59.30%), Query Frame = 3
Query:    3 VGKGRLVQESDIPHLNYVKACLREAFRIHPVVPFNVPHVSTCDATIAGYFIPKGSHVLLSRQGLGRNPEVWEDPLKFKPERHINLADHHHQVELTEPELKFISFSRGRRGCMGVALGSEMTVMLLARLLHGFDWSVPSNEEKIDLAESKS-DLFMAKPLHARAMPRLPAELY 515
            +G+ R + ESDIP+L Y++A  +E FR HP  P N+P +S     + GY+IPK + + ++   +GR+P+VWE+PL+F PER   L+  + +++    + + I F  GRR C G  +G  M   +L  L+H FDW +PS   ++++ E+    L  A PL A   PRL  ++Y
Sbjct:  335 IGRNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERF--LSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAMVTPRLQLDVY 504          
The following BLAST results are available for this feature:
BLAST of CX291469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
C79A1_SORBI6.444e-6266.47Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C79A2_ARATH3.910e-5963.37Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C79B1_SINAL8.710e-5965.12Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
C79B2_ARATH1.258e-5763.95Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
C79B3_ARATH7.630e-5560.47Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
C79F1_ARATH2.540e-5054.65Dihomomethionine N-hydroxylase OS=Arabidopsis thal... [more]
C79F2_ARATH1.067e-4853.49Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
C75A2_SOLME7.683e-3140.70Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C75A3_PETHY2.920e-3038.37Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C75A1_PETHY1.892e-2937.21Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]

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Properties
Property NameValue
Genbank descriptionC03009A03SK OF2 Citrus clementina cDNA clone C03009A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291469 ID=CX291469; Name=CX291469; organism=Citrus clementina; type=EST; length=723bp
TTGTTGGAAAAGGGAGACTTGTTCAAGAATCAGACATCCCCCATCTCAAC
TACGTCAAGGCTTGTTTAAGGGAAGCTTTTCGCATTCATCCCGTTGTACC
ATTTAACGTACCTCATGTCTCAACATGTGACGCCACAATTGCTGGGTACT
TCATTCCAAAAGGCAGTCATGTTTTGCTAAGCCGACAAGGGCTCGGTCGG
AACCCCGAAGTTTGGGAAGATCCTTTAAAATTCAAACCAGAACGCCATAT
TAATTTGGCAGATCATCATCATCAAGTTGAGCTCACCGAACCAGAATTAA
AATTCATTTCATTTAGTAGAGGAAGACGTGGTTGCATGGGCGTGGCACTT
GGGTCTGAGATGACTGTAATGTTATTGGCAAGACTTCTTCATGGATTTGA
TTGGAGCGTGCCATCGAACGAGGAGAAAATTGATTTAGCAGAGTCGAAAT
CTGATCTCTTTATGGCTAAACCCTTGCATGCACGTGCAATGCCTCGTTTG
CCTGCTGAGCTATACCCGGCCTAATTCCTAATATAAAATATGTACCCAGT
ATCGAAATAAAATAGCTGTCGAAATACAAAAGTTCGAAGTAGAACAAATA
ATTGCTGATGCAAACCAAGCCTTTGTTTTCATGATGTGAATTCCATGAAA
CATGAAAAGAATAAATCAATAAATCGAAATTATGGGTAAAAAAAAAAAAA
AAAAACTCGAGGGGGGGCCCGGT
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