CX291476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291476 vs. ExPASy Swiss-Prot
Match: RBP1B_ARATH (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana GN=RANBP1B PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.106e-22 Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 3 Query: 3 RFDKDGNQWKERGAGTVKLLKHKVTDKARLVMRQSKTLKI*ANHLVLPMMSVQEHAGNDKSPVPTAADY 209 RFDKDG+QWKERGAGTVK LKH+V+ K RLVMRQSKTLKI ANHLV MSVQEHAGNDKS V A D+ Sbjct: 60 RFDKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDF 128
BLAST of CX291476 vs. ExPASy Swiss-Prot
Match: RBP1C_ARATH (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana GN=RANBP1C PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.445e-22 Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = 3 Query: 3 RFDKDGNQWKERGAGTVKLLKHKVTDKARLVMRQSKTLKI*ANHLVLPMMSVQEHAGNDKSPVPTAADY 209 RFDK+GNQWKERGAGTVKLLKHK T K RLVMRQSKTLKI ANHL+ MSVQEH+GN+KS + A D+ Sbjct: 57 RFDKEGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDF 125
BLAST of CX291476 vs. ExPASy Swiss-Prot
Match: RBP1A_ARATH (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana GN=RANBP1A PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.087e-21 Identity = 52/69 (75.36%), Postives = 54/69 (78.26%), Query Frame = 3 Query: 3 RFDKDGNQWKERGAGTVKLLKHKVTDKARLVMRQSKTLKI*ANHLVLPMMSVQEHAGNDKSPVPTAADY 209 RFDKD NQWKERGAGTVK LKHK T K RLVMRQSKTLKI ANH V MSVQEH GN+KS V A D+ Sbjct: 58 RFDKDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDF 126
BLAST of CX291476 vs. ExPASy Swiss-Prot
Match: RANG_SCHPO (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe GN=sbp1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15 Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = 3 Query: 3 RFDKDGNQWKERGAGTVKLLKHKVTDKARLVMRQSKTLKI*ANHLVLPMMSVQEHAGNDKSPVPTAA 203 RFDK ++WKERG G +LLKHK T K RLVMR+ KTLK+ ANHL++P M + + G+D+S V T A Sbjct: 105 RFDKAASEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTVA 171
BLAST of CX291476 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.091e-13 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 3 Query: 3 RFDKDGNQWKERGAGTVKLLKHKVTDKARLVMRQSKTLKI*ANHLVLPMMSVQEHAGNDKSPVPTAADY 209 RFD + +WKERG G VK+L+HK + K RL+MR+ + LKI ANH + P M + +AG+D+S V A DY Sbjct: 1197 RFDGESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDY 1265
BLAST of CX291476 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.091e-13 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 3 Query: 3 RFDKDGNQWKERGAGTVKLLKHKVTDKARLVMRQSKTLKI*ANHLVLPMMSVQEHAGNDKSPVPTAADY 209 RFD + +WKERG G VK+L+HK + K RL+MR+ + LKI ANH + P M + +AG+D+S V A DY Sbjct: 1203 RFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDY 1271
BLAST of CX291476 vs. ExPASy Swiss-Prot
Match: YRB1_YEAST (Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae GN=YRB1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.038e-12 Identity = 31/61 (50.82%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 3 RFDKDGNQWKERGAGTVKLLKHKVTDKARLVMRQSKTLKI*ANHLVLPMMSVQEHAGNDKS 185 RFD D +WKERG G K LK+K T+K R++MR+ KTLKI ANH++ P +++ + G+D+S Sbjct: 95 RFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRS 155
BLAST of CX291476 vs. ExPASy Swiss-Prot
Match: RANG_MOUSE (Ran-specific GTPase-activating protein OS=Mus musculus GN=Ranbp1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 3 Query: 9 DKDGNQWKERGAGTVKLLKHKVTDKARLVMRQSKTLKI*ANHLVLPMMSVQEHAGNDKSPV-PTAADY 209 + D +WKERG G VKLLKHK RL+MR+ KTLKI ANH + PMM ++ +AG+D++ V T AD+ Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADF 128
BLAST of CX291476 vs. ExPASy Swiss-Prot
Match: RANG_HUMAN (Ran-specific GTPase-activating protein OS=Homo sapiens GN=RANBP1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 3 Query: 9 DKDGNQWKERGAGTVKLLKHKVTDKARLVMRQSKTLKI*ANHLVLPMMSVQEHAGNDKSPV-PTAADY 209 + D +WKERG G VKLLKHK RL+MR+ KTLKI ANH + PMM ++ +AG+D++ V T AD+ Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADF 128
BLAST of CX291476 vs. ExPASy Swiss-Prot
Match: RANG_BOVIN (Ran-specific GTPase-activating protein OS=Bos taurus GN=RANBP1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 3 Query: 9 DKDGNQWKERGAGTVKLLKHKVTDKARLVMRQSKTLKI*ANHLVLPMMSVQEHAGNDKSPV-PTAADY 209 + D +WKERG G VKLLKHK RL+MR+ KTLKI ANH + PMM ++ +AG+D++ V T AD+ Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADF 128 The following BLAST results are available for this feature:
BLAST of CX291476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291476 ID=CX291476; Name=CX291476; organism=Citrus clementina; type=EST; length=212bpback to top |