CX291501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291501 vs. ExPASy Swiss-Prot
Match: RPF1_PONAB (Ribosome production factor 1 OS=Pongo abelii GN=BXDC5 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.444e-14 Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 10 PDVDELFAGNDADEFSSILKQGCAPKILITTCRFNPSRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR*PDALLIIGLPDVPTAH 318 P+ +E+ DEF+S + +PKILITT R +L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+ PTAH Sbjct: 118 PNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
BLAST of CX291501 vs. ExPASy Swiss-Prot
Match: RPF1_HUMAN (Ribosome production factor 1 OS=Homo sapiens GN=BXDC5 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 5.444e-14 Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 10 PDVDELFAGNDADEFSSILKQGCAPKILITTCRFNPSRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR*PDALLIIGLPDVPTAH 318 P+ +E+ DEF+S + +PKILITT R +L +VIPNSH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+ PTAH Sbjct: 118 PNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
BLAST of CX291501 vs. ExPASy Swiss-Prot
Match: RPF1_XENLA (Ribosome production factor 1 OS=Xenopus laevis GN=bxdc5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.069e-13 Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 10 PDVDELFAGNDADEFSSILKQGCAPKILITTCRFNPSRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR*PDALLIIGLPDVPTAH 318 P +E+ DEF+ + PKILITT R F +L S+IPNS Y R LKKII +D+T ++V++ +R+ P+ L++ LPD PTAH Sbjct: 112 PADEEVALDEATDEFAPYFNKQTTPKILITTSDRPRGRSVRFTEQLSSIIPNSDVYYRRGLALKKIIPQCVSRDYTDLLVINEDRKVPNGLVLCHLPDGPTAH 214
BLAST of CX291501 vs. ExPASy Swiss-Prot
Match: RPF1_RAT (Ribosome production factor 1 OS=Rattus norvegicus GN=Bxdc5 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.069e-13 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 10 PDVDELFAGNDADEFSSILKQGCAPKILITTCRFNPSRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR*PDALLIIGLPDVPTAH 318 P+ +E+ DEF+S + +PKILITT R +L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+ PTAH Sbjct: 118 PNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
BLAST of CX291501 vs. ExPASy Swiss-Prot
Match: RPF1_MOUSE (Ribosome production factor 1 OS=Mus musculus GN=Bxdc5 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.069e-13 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 10 PDVDELFAGNDADEFSSILKQGCAPKILITTCRFNPSRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR*PDALLIIGLPDVPTAH 318 P+ +E+ DEF+S + +PKILITT R +L +VIP+SH Y R LKKII +DFT +IV++ +R+ P+ L++ LP+ PTAH Sbjct: 118 PNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAH 220
BLAST of CX291501 vs. ExPASy Swiss-Prot
Match: RPF1_DANRE (Ribosome production factor 1 OS=Danio rerio GN=bxdc5 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.135e-11 Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 10 PDVDELFAGNDADEFSSILKQGCAPKILITTCRFNPSRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR*PDALLIIGLPDVPTAH 318 P+ +E+ DEFS+ + PK+LITT R F +L +VIP+++ Y R LKK+I + FT ++V++ +R+ P+ +++ LPD PTAH Sbjct: 99 PEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCDQLATVIPHAYVYYRRGLALKKVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAH 201
BLAST of CX291501 vs. ExPASy Swiss-Prot
Match: RPF1_DROME (Probable ribosome production factor 1 OS=Drosophila melanogaster GN=CG6712 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.529e-11 Identity = 37/102 (36.27%), Postives = 60/102 (58.82%), Query Frame = 1 Query: 13 DVDELFAGNDADEFSSILKQGCAPKILITTCRFNPSRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRR*PDALLIIGLPDVPTAH 318 D +EL D+FSS ++ PK+LIT ++ F EL + PN+ R +KKI + A++++FT +++V+ +RR P+ LL+I LP+ PTAH Sbjct: 162 DNEELQKELQLDDFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIFPNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTAH 263 The following BLAST results are available for this feature:
BLAST of CX291501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291501 ID=CX291501; Name=CX291501; organism=Citrus clementina; type=EST; length=319bpback to top |