CX291505

Overview
NameCX291505
Unique NameCX291505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX291505 vs. ExPASy Swiss-Prot
Match: K125_TOBAC (125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 48/230 (20.87%), Postives = 107/230 (46.52%), Query Frame = 2 
Query:    8 SFVSTKAEATEELRGRLGKLKAMYGSGIKALDGIAGELDGNSRSTFGDLNSEVSKHSHALEDLFKGIASEADSLLNDLQSSLYKQEEKLTAYAQQQREAHSRAVENARSVSKVTVNFFKTLDMHASNLTKIVEEAQTVNDQXXXXXXXXXXXSAAIEERQLLEKVAELLASSNARKKQLVQMAVQDLRESASSRTSQLQKEMSTMQDSTFSVKAEWSAHMNKTESHYLED 697
            +F+ +  +A  +L+ ++    A+Y S  +A+  +       S +T  ++++  S +S + ++     A EA+S+ ++LQS+L   + ++  +A++ R+  + + E+  ++S +   FF  L   +  L K       +               +  +  +L+  V  L+++   R+K+LV   + DLRE+ S   + L   +S+M+  T   K +W     + E    E+
Sbjct:  572 NFLDSHDKAVLDLKRKINSSMALYISHFEAMQNVVRLHKATSNATLEEVSTLASSNSISTKEFLDAEAVEANSMFDELQSTLSTHQGEMAHFARELRQRFNDSTEHLTNISAIIQRFFDKLLDESKRLEKHATTVDEIQTNSIAEFEKAYEEQSKSDAEKLIADVTSLVSNHMRRQKELVGARLVDLRETVSGNRTFLDGHVSSMEGITTDAKRKWQDFYMQAEGETKEN 801
The following BLAST results are available for this feature:
BLAST of CX291505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
K125_TOBAC1.871e-1320.87125 kDa kinesin-related protein OS=Nicotiana tabac... [more]
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Properties
Property NameValue
Genbank descriptionC03010A04SK OF2 Citrus clementina cDNA clone C03010A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291505 ID=CX291505; Name=CX291505; organism=Citrus clementina; type=EST; length=717bp
TATGCAATCCTTTGTATCAACAAAGGCTGAGGCTACTGAAGAACTTCGAG
GAAGGTTAGGAAAGTTAAAGGCCATGTATGGTTCTGGTATCAAAGCTTTG
GATGGAATAGCTGGGGAGCTCGATGGAAATTCTCGGTCAACATTTGGTGA
TTTAAATTCTGAAGTTTCTAAACATTCACATGCACTTGAAGATCTCTTCA
AAGGAATTGCTTCAGAAGCTGATTCATTACTAAATGATCTTCAAAGTAGT
CTTTACAAGCAAGAGGAGAAACTAACCGCATATGCACAACAACAGCGTGA
GGCACATTCCAGAGCTGTGGAAAATGCTAGATCAGTTTCTAAAGTAACTG
TAAACTTTTTCAAGACCCTAGACATGCATGCATCCAATCTGACCAAAATT
GTGGAAGAAGCACAGACAGTCAATGATCAGAAATTGTTTGAATTTGAAAA
GAAGTTTGAGGAGTCTGCTGCCATCGAAGAAAGACAATTGTTGGAAAAAG
TTGCAGAACTGCTTGCTAGTTCAAACGCCAGGAAGAAACAGCTGGTCCAA
ATGGCAGTGCAAGATCTCCGTGAGAGTGCATCCAGCAGAACCAGCCAACT
ACAGAAAGAAATGTCAACCATGCAAGATTCCACTTTTTCAGTTAAAGCAG
AGTGGAGTGCACATATGAATAAAACAGAATCCCACTATCTTGAGGATACT
TCTGCTGTAGAAAATGG
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