CX291508

Overview
NameCX291508
Unique NameCX291508
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15531 contig Ccv1_Contig15531:388..1088. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 327.405 bits (838), Expect = 4.528e-89
Identity = 155/198 (78.28%), Postives = 176/198 (88.89%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 590
            EPPY+DS+DW+KWHVFWVDERVVPKDH+DSNYKLA DGFLSKVPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK+ AVQ AL + Q +SDLLPV+MA  ++ EFTWF DK A S L
Sbjct:  124 EPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSML 321          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 327.405 bits (838), Expect = 4.528e-89
Identity = 155/198 (78.28%), Postives = 176/198 (88.89%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 590
            EPPY+DS+DW+KWHVFWVDERVVPKDH+DSNYKLA DGFLSKVPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK+ AVQ AL + Q +SDLLPV+MA  ++ EFTWF DK A S L
Sbjct:  124 EPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSML 321          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.194e-81
Identity = 143/196 (72.96%), Postives = 163/196 (83.16%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 590
            E PYVDSIDWA+WH FWVDERVVPK+HDDSNYKLAYD FLSKVPI  GNVYAIN+ALSAE AA+DYETCLKHL  +NIL  S +TGFPKFDLMLLGMGPDGH+ASLFPGH L  E++KWV  I DSPKPP ERITFTFPVINSSA++A+VVCG+GK+ AV+ AL   +  ++ P    SAE+E  WFLDK A+SKL
Sbjct:  132 ESPYVDSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKVPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALVVCGSGKAEAVEAAL--KKTGNVPPAGSVSAEDELVWFLDKPASSKL 325          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.012e-78
Identity = 136/198 (68.69%), Postives = 161/198 (81.31%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 590
            E PY+++++W+KWHVFWVDERVVPKDH DSNYKLA DG LSKVPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK+ AV  A  + Q +SDLLPV+M S +E   TWF DK A S L
Sbjct:  127 ESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSML 324          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 8.012e-78
Identity = 136/198 (68.69%), Postives = 161/198 (81.31%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 590
            E PY+++++W+KWHVFWVDERVVPKDH DSNYKLA DG LSKVPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK+ AV  A  + Q +SDLLPV+M S +E   TWF DK A S L
Sbjct:  127 ESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSML 324          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 4.719e-62
Identity = 115/200 (57.50%), Postives = 141/200 (70.50%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEG----AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 590
            E PY+DSI+W+KWH+FWVDERV   DH DSNYKLAYDGFLSKVP+   N+YAI++ L AEG    AAE YE CLK     NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  + E  KWVT I DSPKPP +RIT T PVIN ++Y  M VC   ++ +V  AL + ++   LP    +A+ E  WFLD+ A SKL
Sbjct:   55 EAPYIDSIEWSKWHIFWVDERVCAWDHADSNYKLAYDGFLSKVPVPAENIYAIDNGLGAEGNAELAAERYEECLKQKVNQNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHAQINEKVKWVTSITDSPKPPSKRITLTLPVINCASYNVMAVCDKEQADSVAAALNHTKD---LPAGRLTADVEVVWFLDQAAASKL 251          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.162e-60
Identity = 113/200 (56.50%), Postives = 141/200 (70.50%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 590
            +PPY+DSI+W KWHVFWVDERV   +  DSNYKLA +GFLSKVPI   N+YAI+  L+A+G AE     YE CLK+L K  I+  S  TG+P+FDL LLGMGPDGH+ASLFP HP + E +KWVT+I DSPKPPP+RITFT PVINS+ Y  M +C    + +V   + +N  S  LP    SA+ E  W+LD+ A S+L
Sbjct:   55 QPPYIDSIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPIPDKNIYAIDKHLAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYPEFDLQLLGMGPDGHMASLFPNHPQINEKQKWVTYITDSPKPPPKRITFTLPVINSTLYNLMAICDKAPAKSVAEIMKHNNLS--LPSAHLSAQVENVWYLDQAAASEL 252          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL4_ARATH (Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.768e-60
Identity = 112/200 (56.00%), Postives = 140/200 (70.00%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 590
            EP Y +SI+W+KWH+FWVDERVVP DH+DSNYKLA+DGFLSKVPI   N+Y I+   +A G A+     YE CLK L   NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  +KE    VT+I DSPKPPP+RITFT PVIN ++Y  M VC   ++ AV     +N +   LP    +A+ E  WFLD+ A SK+
Sbjct:   61 EPKYQESIEWSKWHIFWVDERVVPLDHEDSNYKLAFDGFLSKVPIPIANIYPIDKDCAALGDAKSAALLYEECLKRLVNRNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHYQIKEKANLVTYITDSPKPPPKRITFTLPVINCASYNLMAVCDEAQADAVAKVFNHNFD---LPAAWLTADVEAIWFLDQAAASKI 257          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.297e-55
Identity = 102/201 (50.75%), Postives = 135/201 (67.16%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNS----DLLPVQMAS-AEEEFTWFLDKDATSKL 590
            E PY  ++DW+KW++FW DER V K+H +SNY++  +GFLSKVPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  KS AV  A+ +N +       LP +M    + +  WFLDK A S L
Sbjct:   66 EAPYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSL 266          
BLAST of CX291508 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSI (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica GN=OsI_025867 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.297e-55
Identity = 102/201 (50.75%), Postives = 135/201 (67.16%), Query Frame = 3
Query:    3 EPPYVDSIDWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNS----DLLPVQMAS-AEEEFTWFLDKDATSKL 590
            E PY  ++DW+KW++FW DER V K+H +SNY++  +GFLSKVPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  KS AV  A+ +N +       LP +M    + +  WFLDK A S L
Sbjct:   66 EAPYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSL 266          
The following BLAST results are available for this feature:
BLAST of CX291508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
6PGL4_ORYSJ4.528e-8978.28Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSI4.528e-8978.28Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH1.194e-8172.96Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL3_ORYSJ8.012e-7868.69Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI8.012e-7868.69Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL2_ARATH4.719e-6257.50Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]
6PGL3_ARATH1.162e-6056.50Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL4_ARATH5.768e-6056.00Probable 6-phosphogluconolactonase 4 OS=Arabidopsi... [more]
6PGL2_ORYSJ7.297e-5550.75Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL2_ORYSI7.297e-5550.75Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03010A07SK OF2 Citrus clementina cDNA clone C03010A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291508 ID=CX291508; Name=CX291508; organism=Citrus clementina; type=EST; length=701bp
TGGAACCCCCGTATGTAGATTCAATTGACTGGGCGAAATGGCATGTGTTT
TGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGATAGCAATTATAA
GCTTGCTTATGATGGTTTCCTTTCTAAGGTACCAATTACCACTGGCAATG
TCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAGCTGAAGATTAT
GAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATTAGCTACATCTGC
TGCTACTGGTTTTCCAAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAG
ATGGACATATAGCTTCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAAT
GAAAAATGGGTTACTTTCATTAAAGACTCGCCAAAGCCACCTCCAGAGAG
AATCACTTTCACCTTCCCTGTAATCAACTCATCTGCATATATTGCAATGG
TGGTGTGTGGTGCTGGAAAATCAAGTGCAGTTCAAACTGCATTGGGTAAT
AATCAAAACTCTGATTTGCTGCCAGTTCAAATGGCATCGGCTGAAGAAGA
ATTTACTTGGTTTCTTGACAAAGACGCGACTTCAAAGCTGTAAGAGTCGG
AACAATTAGCTGTATGCGTGAATCCCTGTTATCTGCTATGATAATTGGTT
TGATCTGTGTGGTTTGACTACTAGTACTGCTGGATTTTGTTAGTAATGAG
A
back to top