CX291512

Overview
NameCX291512
Unique NameCX291512
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291512 vs. ExPASy Swiss-Prot
Match: FHIT_BOVIN (Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=FHIT PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.518e-11
Identity = 40/111 (36.04%), Postives = 56/111 (50.45%), Query Frame = 2
Query:   35 IDPRQAFYSTPLCYVLVQLAPSASWPCALSAQRRDAGRLGDLTADETCEIWLTAQTGGTKIESYHKDSSLAFAIQEGPQAGQTVTHGHIHIDPL*ADSSEENDGNKDVKEK 367
            I P   F  T L + LV   P       L    R   R  D++ +E  +++  AQ  GT +E + + +SL F++Q+GP+AGQTV H H+HI P  A     ND   D  EK
Sbjct:   10 IKPSVVFLKTELSFALVNRKPVVPGH-VLVCPLRPVERFRDMSPEEVADLFQAAQRVGTVVEKHFQGTSLTFSMQDGPEAGQTVKHVHVHILPRKAGDFHRNDSIYDALEK 119          
BLAST of CX291512 vs. ExPASy Swiss-Prot
Match: FHIT_DICDI (Bis(5'-adenosyl)-triphosphatase OS=Dictyostelium discoideum GN=fhit PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11
Identity = 40/109 (36.70%), Postives = 57/109 (52.29%), Query Frame = 2
Query:   47 QAFYSTPLCYVLVQLAPSASWPCALSAQRRDAGRLGDLTADETCEIWLTAQTGGTKIESYHKDSSLAFAIQEGPQAGQTVTHGHIHIDPL*ADSSEENDGNKDVKEKRK 373
            + F++T L + LV L P       L   +R   R+ DLT +E  ++WL+AQ   + +E +     + FAIQ+G  AGQTV H HIHI P      E ND   +  EK +
Sbjct:   15 EIFFTTELSFALVNLKPVLPGH-VLVCPKRIVPRVKDLTKEEFTDLWLSAQRISSVVEEHFNGDGITFAIQDGKNAGQTVEHVHIHIIPRKKFDFENNDQIYNEIEKER 122          
BLAST of CX291512 vs. ExPASy Swiss-Prot
Match: FHIT_HUMAN (Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN=FHIT PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 9.836e-11
Identity = 38/103 (36.89%), Postives = 51/103 (49.51%), Query Frame = 2
Query:   35 IDPRQAFYSTPLCYVLVQLAPSASWPCALSAQRRDAGRLGDLTADETCEIWLTAQTGGTKIESYHKDSSLAFAIQEGPQAGQTVTHGHIHIDPL*ADSSEEND 343
            I P   F  T L + LV   P       L    R   R  DL  DE  +++ T Q  GT +E +   +SL F++Q+GP+AGQTV H H+H+ P  A     ND
Sbjct:   10 IKPSVVFLKTELSFALVNRKPVVPGH-VLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRND 111          
The following BLAST results are available for this feature:
BLAST of CX291512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
FHIT_BOVIN1.518e-1136.04Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=F... [more]
FHIT_DICDI4.415e-1136.70Bis(5'-adenosyl)-triphosphatase OS=Dictyostelium d... [more]
FHIT_HUMAN9.836e-1136.89Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN... [more]
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Properties
Property NameValue
Genbank descriptionC03010A12SK OF2 Citrus clementina cDNA clone C03010A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291512 ID=CX291512; Name=CX291512; organism=Citrus clementina; type=EST; length=662bp
TCCATCGAGCAATATGCGTTCGGCCCTTTCTAAGATAGATCCTAGGCAAG
CGTTCTATTCAACCCCTCTATGCTACGTCTTGGTACAACTTGCGCCCTCT
GCTTCCTGGCCATGTGCATTGTCTGCCCAGAGGCGTGACGCGGGTCGCTT
AGGAGATCTTACTGCTGATGAGACCTGTGAAATATGGCTCACGGCCCAGA
CGGGTGGAACAAAGATCGAAAGCTACCACAAGGATTCATCACTAGCATTT
GCCATTCAAGAAGGACCTCAAGCTGGACAGACAGTGACCCATGGACACAT
CCATATTGACCCACTCTAAGCTGACAGCTCTGAAGAAAATGATGGGAATA
AAGATGTGAAGGAGAAGCGTAAGCTTGATTTAGATATTCAAATGAAGAAC
ACGTACCATGGAAGAGATGGCTCAGGAGGCTGATCGACCCACGGCGACTT
TTGTCAAAAATTTAACAATGCCTTGCACTGAGCTTTTCTCAAGCTTTCAT
CAAAGCTGCCTCCAATGAATTAGAGATCTAAGAAACTGCCCTGCAATAAT
ACTTCATGGAAGTTTATGAACATTTATAATACTTACGCTAAGCATTGAAG
CTCTCATAGAATTCTTATACATCATACCTATGCAGAATAATCCTTCACTC
GACCTCTTGTTG
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