CX291514

Overview
NameCX291514
Unique NameCX291514
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN7_ARATH (Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana GN=MAN7 PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.080e-81
Identity = 144/239 (60.25%), Postives = 179/239 (74.90%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSGAN--QRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRIRKMYVRLRNVQ 711
            HIK VL R NT T V YKD+PTIMAWELMNEPRC +DPSG+ IQ WITEMA++VKS+D NHLLEAGLEGFYG SS + +  NP  Q GTDFIANN+IP IDF T+HSYPD+W P SS++SQ+ FLN WL  HIQDAQ++L KPI+LAEFGKS+K  G    QRD +F+TVYS IY            +FWQL   G+D+++DGY +I S++ ST  +I+ QS+KL  IRK++ R+ NV+
Sbjct:  173 HIKAVLNRFNTFTKVHYKDDPTIMAWELMNEPRCPSDPSGRAIQAWITEMAAHVKSLDRNHLLEAGLEGFYGQSSPQSKTLNPPGQFGTDFIANNRIPGIDFVTVHSYPDEWFPDSSEQSQMDFLNKWLDAHIQDAQNVLHKPIILAEFGKSMKKPGYTPAQRDIVFNTVYSKIYGSAKRGGAAAGGLFWQLLVNGIDNFQDGYGIILSQSSSTVNVISQQSRKLTLIRKIFARMINVE 411          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN1_ORYSJ (Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa subsp. japonica GN=MAN1 PE=2 SV=2)

HSP 1 Score: 297.36 bits (760), Expect = 5.122e-80
Identity = 143/241 (59.34%), Postives = 177/241 (73.44%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSS-SEKQQYNPN-FQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSG--ANQRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRIRKMYVRLRNVQ 711
            H+KTVLTR NT+TGVAY+D+PTI+AWELMNEPRC +D SG+T+Q WITEMA++VKSID NH+LE GLEGFYG SS S     NP+ +Q+GTDFIANNQ+P IDFAT+HSYPDQWL    D++Q+ F+  WL  HI DAQ +LRKP+L+AEFGKS K  G  + QRD L+ TVY+ IY            +FWQL   G+DSYRDGYEV+F E PST  +IT  S++L  + K + R R  Q
Sbjct:  180 HVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSDLSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGYQLGTDFIANNQVPGIDFATVHSYPDQWLSGKDDQAQLGFMGRWLDAHIADAQAVLRKPLLIAEFGKSWKDPGYSSGQRDALYGTVYAKIYESARRGGATVGGLFWQLLVPGMDSYRDGYEVVFGETPSTTGVITTNSRRLRFLSKAFARARQAQ 420          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN5_SOLLC (Mannan endo-1,4-beta-mannosidase 5 OS=Solanum lycopersicum GN=MAN5 PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.709e-67
Identity = 120/228 (52.63%), Postives = 158/228 (69.30%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSGANQ--RDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRI 678
            HIK V+TR NT+TG+ YKD+ TIMAWELMNEPR  AD SG T+  W+ EMAS+VKS+D  HLLE G+EGFYG S  E++  NP +QVGTDFI+N+ I  IDFAT+H+Y DQWL   SD++Q+ F+  W+ +H QDA++IL+KP++LAEFGKS +  G NQ  RD    T+Y  IY            + WQL  +G+++Y DGY +   +NPSTA IIT QS  +  +
Sbjct:  181 HIKKVVTRFNTITGMTYKDDSTIMAWELMNEPRNQADYSGNTLNAWVQEMASFVKSLDNKHLLEIGMEGFYGDSVPERKSINPGYQVGTDFISNHLIKEIDFATIHAYTDQWLSGQSDDAQMIFMQKWMTSHWQDAKNILKKPLVLAEFGKSSRDPGYNQNIRDTFMSTIYRNIYSLAKDGGTMGGSLIWQLVAQGMENYEDGYCIELGKNPSTAGIITSQSHAMTAL 408          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN2_SOLLC (Mannan endo-1,4-beta-mannosidase 2 OS=Solanum lycopersicum GN=MAN2 PE=2 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.709e-67
Identity = 120/228 (52.63%), Postives = 158/228 (69.30%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSGANQ--RDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRI 678
            HIK V+TR NT+TG+ YKD+ TIMAWELMNEPR  AD SG T+  W+ EMAS+VKS+D  HLLE G+EGFYG S  E++  NP +QVGTDFI+N+ I  IDFAT+H+Y DQWL   SD++Q+ F+  W+ +H QDA++IL+KP++LAEFGKS +  G NQ  RD    T+Y  IY            + WQL  +G+++Y DGY +   +NPSTA IIT QS  +  +
Sbjct:  181 HIKKVVTRFNTITGMTYKDDSTIMAWELMNEPRNQADYSGNTLNAWVQEMASFVKSLDNKHLLEIGMEGFYGDSVPERKSINPGYQVGTDFISNHLIKEIDFATIHAYTDQWLSGQSDDAQMIFMQKWMTSHWQDAKNILKKPLVLAEFGKSSRDPGYNQNIRDTFMSTIYRNIYSLAKDGGTMGGSLIWQLVAQGMENYEDGYCIELGKNPSTAGIITSQSHAMTAL 408          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN9_ORYSJ (Putative mannan endo-1,4-beta-mannosidase 9 OS=Oryza sativa subsp. japonica GN=MAN9 PE=2 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 6.495e-67
Identity = 113/221 (51.13%), Postives = 158/221 (71.49%), Query Frame = 1
Query:   13 VLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSG--ANQRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKL 669
            VLTR+N +TGVAYKD+PTI AWEL+NEPRC +D SGKT+Q W+TEMA YVKS+D NH++E GLEGFYG   S  + +NP + VGTDFIANN +P++DFAT+HSYPDQW+  +S + Q++F+  W+ +HI+D+  +LRKP+L+ EFG S +++G     RD  F TVY A+Y            +FWQ+   G++S+ DGYEV+   + STA ++  Q  ++
Sbjct:  183 VLTRVNKITGVAYKDDPTIFAWELINEPRCQSDLSGKTLQAWVTEMAGYVKSVDPNHMVEIGLEGFYG--ESMHKNFNPGYTVGTDFIANNLVPAVDFATIHSYPDQWVSGASSDEQVAFMRKWMADHIRDSAAVLRKPLLVTEFGWSARSNGYTVAARDAYFRTVYDAVYASAREGGACAGGLFWQVMAPGMESWTDGYEVVLERSKSTADVVAHQCARI 401          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN1_SOLLC (Mannan endo-1,4-beta-mannosidase 1 OS=Solanum lycopersicum GN=MAN1 PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 7.939e-65
Identity = 112/228 (49.12%), Postives = 159/228 (69.74%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSGANQRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRIRK 684
            HI+ V+TR+N++T VAYKD+PTIMAWELMNEPR  AD SGKT+  W+ EMAS+VKS+D  HLLE G+EGFYG S  E++  NP +QVGTDFI+N+ I  IDFAT+H+Y DQW+   SD++Q+ ++  W+ +H +DA++IL+KP++LAEFGKS  + G   RD    +VY  +Y            + WQL   G+++Y DGY ++  + PST  II+DQ+  +  + +
Sbjct:  169 HIEKVVTRLNSITKVAYKDDPTIMAWELMNEPRDQADYSGKTVNGWVQEMASFVKSLDNKHLLEVGMEGFYGDSIPERKSVNPGYQVGTDFISNHLINEIDFATIHAYTDQWVSGQSDDAQLVWMEKWITSHWEDARNILKKPLVLAEFGKS--SRGQGSRDIFMSSVYRNVYNLAKEGGTMAGSLVWQLMAHGMENYDDGYCIVLGQTPSTTQIISDQAHVMTALAR 394          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN4_SOLLC (Mannan endo-1,4-beta-mannosidase 4 OS=Solanum lycopersicum GN=MAN4 PE=1 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 1.037e-64
Identity = 115/229 (50.22%), Postives = 165/229 (72.05%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQV-GTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSG--ANQRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRI 678
            ++K VLTR+NT+T VAYKD+PTI++WEL+NEPRC +D SGKT Q+W+ EMA Y+KSID NHLLE GLEGFYG   ++ +QYNPN  + GT+FI+NNQ+  IDF T+H YP+QWLP  + E+Q  + + W+  HI D++ +L+KP+L+AEFGKS KT G    +RD  F+ +Y  I+            +FWQ+  +G+ S+ DGY+V+  E+PST+ +I  QS +L+++
Sbjct:  174 NVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYG---NDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSK-MLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVILLQSLRLSKL 398          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN3_ARATH (Mannan endo-1,4-beta-mannosidase 3 OS=Arabidopsis thaliana GN=MAN3 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.778e-64
Identity = 114/232 (49.14%), Postives = 160/232 (68.97%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSE-KQQYNPNFQ--VGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSGAN--QRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRIR 681
            H+KT++ R+NT T V YKDEPTIM WELMNEP+C ADPSGKT+  W+ EMA YVKS+D  HLL  GLEGFYG SS + K   NP     +GTDFIAN+++ +IDFA++HSYPD W P+  ++S+++ L  WL  H++DAQ+IL+KP++L EFGK   T G    QRD +F+  +  IY            +FW + ++G+++++D   ++ SEN +T  IIT++S+KL  IR
Sbjct:  173 HVKTMVNRVNTFTKVEYKDEPTIMGWELMNEPQCRADPSGKTLTAWMNEMALYVKSVDSKHLLSTGLEGFYGDSSPQRKTSLNPVAANVLGTDFIANHKLDAIDFASIHSYPDLWFPNLDEKSRLNLLRKWLECHLEDAQNILKKPLILGEFGKPTNTPGYTQAQRDAVFNATFDTIYESAEKGGPAAGALFWHVISDGMNNFKDPLSIVLSENSTTVNIITEESRKLGLIR 404          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN1_ARATH (Mannan endo-1,4-beta-mannosidase 1 OS=Arabidopsis thaliana GN=MAN1 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.705e-63
Identity = 122/234 (52.14%), Postives = 151/234 (64.53%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQV--GTDFIANNQIPSIDFATLHSYPDQWLP--SSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSG--ANQRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENP-STATIITDQSQKLNRIR 681
            H+KTVLTR NT+TG  YKD+PTI +WEL+NEPRC    +   +QDW+ EMASYVKSID NHLLE GLEGFYG S  E+  YNP  +V  GTDFI NNQIP IDFAT+H YPD WLP  SS    Q +F++ W+  HI+D  +I++KP+L+ EFGKS K  G    +R++ F  VY  IY            +FWQL T       DGYEV     P +TA +I DQS KL  ++
Sbjct:  168 HVKTVLTRKNTITGRMYKDDPTIFSWELINEPRCNDSTASNILQDWVKEMASYVKSIDSNHLLEIGLEGFYGESIPERTVYNPGGRVLTGTDFITNNQIPDIDFATIHIYPDSWLPLQSSRTGEQDTFVDRWIGAHIEDCDNIIKKPLLITEFGKSSKYPGFSLEKRNKFFQRVYDVIYDSARAGGSCTGGVFWQLTTNRTGLLGDGYEVFMQAGPNTTAQLIADQSSKLKNLK 401          
BLAST of CX291514 vs. ExPASy Swiss-Prot
Match: MAN3_SOLLC (Mannan endo-1,4-beta-mannosidase 3 OS=Solanum lycopersicum GN=MAN3 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.162e-62
Identity = 114/221 (51.58%), Postives = 157/221 (71.04%), Query Frame = 1
Query:    1 HIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQ-DWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQVGTDFIANNQIPSIDFATLHSYPDQWLPSSSDESQISFLNNWLYNHIQDAQDILRKPILLAEFGKSLKTSGANQRDQLFDTVYSAIYXXXXXXXXXXXXMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQS 660
            HI+ V+TR+N++T VAYKD+ TIMAWELMNEPR  AD SGKT+   W+ EMAS+VKS+D  HLLE G+EGFYG S  E++  NP +QVGTDFI+N+ I  IDFAT+H+Y DQWL   SDE+Q++++  W+ +H +DA++IL+KP++LAEFGKS + SG   RD    +VY  +Y            + WQL   G+++Y DGY ++   NPST  II++Q+
Sbjct:  170 HIE-VVTRLNSITKVAYKDDATIMAWELMNEPRDQADYSGKTVNVGWVQEMASFVKSLDNKHLLEVGMEGFYGDSIPERKLVNPGYQVGTDFISNHLINEIDFATIHAYTDQWLSGQSDEAQLAWMEKWIRSHWEDARNILKKPLVLAEFGKSSR-SGEGSRDIFMSSVYRNVYNLAKEGGTMGGSLVWQLMAHGMENYDDGYSIVLGLNPSTTQIISNQA 388          
The following BLAST results are available for this feature:
BLAST of CX291514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
MAN7_ARATH2.080e-8160.25Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis ... [more]
MAN1_ORYSJ5.122e-8059.34Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa... [more]
MAN5_SOLLC1.709e-6752.63Mannan endo-1,4-beta-mannosidase 5 OS=Solanum lyco... [more]
MAN2_SOLLC1.709e-6752.63Mannan endo-1,4-beta-mannosidase 2 OS=Solanum lyco... [more]
MAN9_ORYSJ6.495e-6751.13Putative mannan endo-1,4-beta-mannosidase 9 OS=Ory... [more]
MAN1_SOLLC7.939e-6549.12Mannan endo-1,4-beta-mannosidase 1 OS=Solanum lyco... [more]
MAN4_SOLLC1.037e-6450.22Mannan endo-1,4-beta-mannosidase 4 OS=Solanum lyco... [more]
MAN3_ARATH8.778e-6449.14Mannan endo-1,4-beta-mannosidase 3 OS=Arabidopsis ... [more]
MAN1_ARATH9.705e-6352.14Mannan endo-1,4-beta-mannosidase 1 OS=Arabidopsis ... [more]
MAN3_SOLLC2.162e-6251.58Mannan endo-1,4-beta-mannosidase 3 OS=Solanum lyco... [more]

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Properties
Property NameValue
Genbank descriptionC03010B02SK OF2 Citrus clementina cDNA clone C03010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291514 ID=CX291514; Name=CX291514; organism=Citrus clementina; type=EST; length=713bp
CATATCAAGACTGTTCTTACGAGAATAAACACTGTGACCGGAGTTGCTTA
CAAAGATGAACCAACGATTATGGCTTGGGAGCTTATGAATGAGCCAAGAT
GTTATGCAGATCCATCGGGAAAAACCATTCAGGATTGGATTACAGAGATG
GCTTCTTATGTAAAATCAATTGATGGAAATCACTTATTAGAAGCTGGTTT
AGAAGGGTTCTATGGACCATCGTCATCTGAGAAGCAGCAATACAATCCAA
ATTTTCAAGTAGGAACAGATTTCATTGCAAACAATCAAATTCCCAGCATT
GATTTTGCTACACTTCATTCTTATCCAGATCAATGGCTTCCCAGCTCCAG
TGATGAAAGCCAAATTTCATTCTTGAACAATTGGCTCTACAATCATATCC
AAGATGCACAGGACATTCTTCGGAAGCCAATTCTCTTAGCGGAGTTTGGA
AAATCTTTGAAAACCTCTGGTGCCAACCAAAGGGACCAGCTGTTTGATAC
GGTCTACTCGGCAATTTATTCGTCAGCCAGGAGTGGCGGTGCAGCTGTTG
GTGGCATGTTCTGGCAACTTTTTACCGAAGGATTAGACTCTTACCGTGAT
GGGTATGAGGTGATCTTCAGTGAGAACCCCTCGACTGCAACCATCATCAC
TGACCAATCTCAGAAGCTCAATCGAATTCGAAAGATGTATGTCAGACTGA
GAAACGTTCAGAA
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