CX291518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291518 vs. ExPASy Swiss-Prot
Match: YTHD2_MACFA (YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.626e-49 Identity = 91/173 (52.60%), Postives = 115/173 (66.47%), Query Frame = 2 Query: 92 HYNEEDFQVDYVDAKFFVIKSYSEDDVHKSIKYGVWSSTSHGNKKLQSAYEDAQKLAAGKPGGCPIFLFFSVNASSQFCGVAEMIGPVDFYKDMDFWQQDKWSGSFPVKWHIIKDVPNTSLRHIILRNNENKPVTNSRDTQEIMHTEGLEMLKIFKNHPRDTSLFDDFMYYEK 610 +YN +DF + + F+IKSYSEDD+H+SIKY +W ST HGNK+L +AY G P++L FSVN S FCGVAEM VD+ W QDKW G F V+W +KDVPN+ LRHI L NNENKPVTNSRDTQE+ + ++LKI ++ TS+FDDF +YEK Sbjct: 397 NYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMN-------GKGPVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEK 562
BLAST of CX291518 vs. ExPASy Swiss-Prot
Match: YTHD2_HUMAN (YTH domain family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 4.626e-49 Identity = 91/173 (52.60%), Postives = 115/173 (66.47%), Query Frame = 2 Query: 92 HYNEEDFQVDYVDAKFFVIKSYSEDDVHKSIKYGVWSSTSHGNKKLQSAYEDAQKLAAGKPGGCPIFLFFSVNASSQFCGVAEMIGPVDFYKDMDFWQQDKWSGSFPVKWHIIKDVPNTSLRHIILRNNENKPVTNSRDTQEIMHTEGLEMLKIFKNHPRDTSLFDDFMYYEK 610 +YN +DF + + F+IKSYSEDD+H+SIKY +W ST HGNK+L +AY G P++L FSVN S FCGVAEM VD+ W QDKW G F V+W +KDVPN+ LRHI L NNENKPVTNSRDTQE+ + ++LKI ++ TS+FDDF +YEK Sbjct: 397 NYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMN-------GKGPVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEK 562
BLAST of CX291518 vs. ExPASy Swiss-Prot
Match: YTHD2_BOVIN (YTH domain family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.626e-49 Identity = 91/173 (52.60%), Postives = 115/173 (66.47%), Query Frame = 2 Query: 92 HYNEEDFQVDYVDAKFFVIKSYSEDDVHKSIKYGVWSSTSHGNKKLQSAYEDAQKLAAGKPGGCPIFLFFSVNASSQFCGVAEMIGPVDFYKDMDFWQQDKWSGSFPVKWHIIKDVPNTSLRHIILRNNENKPVTNSRDTQEIMHTEGLEMLKIFKNHPRDTSLFDDFMYYEK 610 +YN +DF + + F+IKSYSEDD+H+SIKY +W ST HGNK+L +AY G P++L FSVN S FCGVAEM VD+ W QDKW G F V+W +KDVPN+ LRHI L NNENKPVTNSRDTQE+ + ++LKI ++ TS+FDDF +YEK Sbjct: 398 NYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMN-------GKGPVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEK 563
BLAST of CX291518 vs. ExPASy Swiss-Prot
Match: YTHD1_MOUSE (YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 7.890e-49 Identity = 89/172 (51.74%), Postives = 112/172 (65.12%), Query Frame = 2 Query: 95 YNEEDFQVDYVDAKFFVIKSYSEDDVHKSIKYGVWSSTSHGNKKLQSAYEDAQKLAAGKPGGCPIFLFFSVNASSQFCGVAEMIGPVDFYKDMDFWQQDKWSGSFPVKWHIIKDVPNTSLRHIILRNNENKPVTNSRDTQEIMHTEGLEMLKIFKNHPRDTSLFDDFMYYEK 610 YN ++F + + F+IKSYSEDD+H+SIKY +W ST HGNK+L A+ P++L FSVN S FCGVAEM PVD+ W QDKW G F VKW +KDVPN LRHI L NN+NKPVTNSRDTQE+ + ++LKI ++ TS+FDDF +YEK Sbjct: 377 YNPKEFDWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKG-------PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEK 541
BLAST of CX291518 vs. ExPASy Swiss-Prot
Match: YTHD1_HUMAN (YTH domain family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 7.890e-49 Identity = 89/172 (51.74%), Postives = 114/172 (66.28%), Query Frame = 2 Query: 95 YNEEDFQVDYVDAKFFVIKSYSEDDVHKSIKYGVWSSTSHGNKKLQSAYEDAQKLAAGKPGGCPIFLFFSVNASSQFCGVAEMIGPVDFYKDMDFWQQDKWSGSFPVKWHIIKDVPNTSLRHIILRNNENKPVTNSRDTQEIMHTEGLEMLKIFKNHPRDTSLFDDFMYYEK 610 YN ++F+ + + F+IKSYSEDD+H+SIKY +W ST HGNK+L SA+ P++L FSVN S FCGVAEM PVD+ W QDKW G F V+W +KDVPN LRHI L NN+NKPVTNSRDTQE+ + ++LKI ++ TS+FDDF +YEK Sbjct: 377 YNPKEFEWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKG-------PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEK 541
BLAST of CX291518 vs. ExPASy Swiss-Prot
Match: YTHD3_PONAB (YTH domain family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.346e-48 Identity = 91/173 (52.60%), Postives = 113/173 (65.32%), Query Frame = 2 Query: 92 HYNEEDFQVDYVDAKFFVIKSYSEDDVHKSIKYGVWSSTSHGNKKLQSAYEDAQKLAAGKPGGCPIFLFFSVNASSQFCGVAEMIGPVDFYKDMDFWQQDKWSGSFPVKWHIIKDVPNTSLRHIILRNNENKPVTNSRDTQEIMHTEGLEMLKIFKNHPRDTSLFDDFMYYEK 610 +YN +DF + + + F+IKSYSEDD+H+SIKY +W ST HGNK+L +AY G P++L FSVN S FCGVAEM VD+ W QDKW G F VKW +KDVPN LRHI L NN+NKPVTNSRDTQE+ + ++LKI TS+FDDF +YEK Sbjct: 403 NYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLN-------GKGPLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEK 568
BLAST of CX291518 vs. ExPASy Swiss-Prot
Match: YTHD3_MOUSE (YTH domain family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.346e-48 Identity = 91/173 (52.60%), Postives = 113/173 (65.32%), Query Frame = 2 Query: 92 HYNEEDFQVDYVDAKFFVIKSYSEDDVHKSIKYGVWSSTSHGNKKLQSAYEDAQKLAAGKPGGCPIFLFFSVNASSQFCGVAEMIGPVDFYKDMDFWQQDKWSGSFPVKWHIIKDVPNTSLRHIILRNNENKPVTNSRDTQEIMHTEGLEMLKIFKNHPRDTSLFDDFMYYEK 610 +YN +DF + + + F+IKSYSEDD+H+SIKY +W ST HGNK+L +AY G P++L FSVN S FCGVAEM VD+ W QDKW G F VKW +KDVPN LRHI L NN+NKPVTNSRDTQE+ + ++LKI TS+FDDF +YEK Sbjct: 403 NYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLN-------GKGPLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEK 568
BLAST of CX291518 vs. ExPASy Swiss-Prot
Match: YTHD3_HUMAN (YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.346e-48 Identity = 91/173 (52.60%), Postives = 113/173 (65.32%), Query Frame = 2 Query: 92 HYNEEDFQVDYVDAKFFVIKSYSEDDVHKSIKYGVWSSTSHGNKKLQSAYEDAQKLAAGKPGGCPIFLFFSVNASSQFCGVAEMIGPVDFYKDMDFWQQDKWSGSFPVKWHIIKDVPNTSLRHIILRNNENKPVTNSRDTQEIMHTEGLEMLKIFKNHPRDTSLFDDFMYYEK 610 +YN +DF + + + F+IKSYSEDD+H+SIKY +W ST HGNK+L +AY G P++L FSVN S FCGVAEM VD+ W QDKW G F VKW +KDVPN LRHI L NN+NKPVTNSRDTQE+ + ++LKI TS+FDDF +YEK Sbjct: 403 NYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLN-------GKGPLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEK 568
BLAST of CX291518 vs. ExPASy Swiss-Prot
Match: YD374_YEAST (YTH domain-containing protein YDR374C OS=Saccharomyces cerevisiae GN=YDR374C PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.809e-30 Identity = 65/159 (40.88%), Postives = 97/159 (61.01%), Query Frame = 2 Query: 128 DAKFFVIKSYSEDDVHKSIKYGVWSSTSHGNKKLQSAYEDAQKLAAGKPGGCPIFLFFSVNASSQFCGVAEMIGPVDFYKDMDFWQQD-KWSGSFPVKWHIIKDVPNTSLRHIILRNNENKPVTNSRDTQEIMHTEGLEMLKIFKNHPRDTSLFDDFMY 601 +++FFVIKS S V +S G+WSST GNK+L AY+ G +FLFFS+N S +FCGVAEM+ + D W+ + K+ +F V+W I++D+ N SL+ ++ +NE KP+T+SRDTQEI ++ G+ ++ +FK D F D Y Sbjct: 154 NSRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNS-------GAKVFLFFSINTSGRFCGVAEMVSDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITHSRDTQEIPYSIGISIINLFKTQDSDIFSFLDETY 305 The following BLAST results are available for this feature:
BLAST of CX291518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291518 ID=CX291518; Name=CX291518; organism=Citrus clementina; type=EST; length=612bpback to top |