CX291523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291523 vs. ExPASy Swiss-Prot
Match: CCH11_ARATH (Cyclin-H1-1 OS=Arabidopsis thaliana GN=CYCH1-1 PE=1 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 3.874e-80 Identity = 141/209 (67.46%), Postives = 175/209 (83.73%), Query Frame = 3 Query: 75 MADFQTSTHRAKWIFTPQELIEKYKASNRRAIQTLEKYGTTQMEVDVDGSFSYPEPQNNAKDNSEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDFAR 701 MADFQTST RAKWIFTPQ+L E+YKA+N+RA+Q LEK GTTQ+EVD GS +YP+ + + D ++K + KPL+ +EE+ MR FYE K++EVCSAF FP+KIQATAL YFKRFYLQWSVM+HHPK IMLTCVYAACKIEENHVSAEE+GKGI+QDH++IL YEM V Q+LEFDLIVY PYR +EGF+N+ME+F Q ++ E+Q L+ + Sbjct: 1 MADFQTSTQRAKWIFTPQKLAERYKAANQRAVQMLEKCGTTQVEVDASGSLTYPKDKVGSGDQADK--KLKPLSADEERFMRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVMQHHPKEIMLTCVYAACKIEENHVSAEEIGKGINQDHRIILKYEMAVLQSLEFDLIVYAPYRAIEGFVNNMEEFLQARDDEIQKLESLLK 207
BLAST of CX291523 vs. ExPASy Swiss-Prot
Match: CCH11_ORYSJ (Cyclin-H1-1 OS=Oryza sativa subsp. japonica GN=CYCH1-1 PE=1 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 1.628e-78 Identity = 139/207 (67.15%), Postives = 175/207 (84.54%), Query Frame = 3 Query: 75 MADFQTSTHRAKWIFTPQELIEKYKASNRRAIQTLEKYGTTQMEVD-VDGSFSYPEPQNNAKDNSEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKD 692 MADF+TSTHR +WIF +L++++ A+N+RA +TL +YGTT+++VD VDGS SYPEP A D+ S KPL+ EEE+ MRVFYE K++EVCSAF FP+KIQATA++YFKRFYLQWSVMEHHPK+IMLTC+Y++CK+EENHVSAEELGKGI QDHQ+ILN EMIV ++L+FDLIVY PYR +EGF++DMEDFC+ NGE Q L+D Sbjct: 1 MADFRTSTHRERWIFQTNDLMDRWGAANQRATETLVQYGTTRLKVDPVDGSLSYPEP---APDHVVGSSGVKPLSCEEERLMRVFYEQKIQEVCSAFKFPHKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCIYSSCKVEENHVSAEELGKGIQQDHQIILNNEMIVLKSLDFDLIVYAPYRSIEGFVDDMEDFCRAGNGEHQRLQD 204
BLAST of CX291523 vs. ExPASy Swiss-Prot
Match: CCNH_XENLA (Cyclin-H OS=Xenopus laevis GN=ccnh PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23 Identity = 59/128 (46.09%), Postives = 84/128 (65.62%), Query Frame = 3 Query: 291 LNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAEE----LGK---GISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDME 647 L EE ++ +YE +L + C+AF P + TA +YFKRFYL SVMEHHP+ IMLTCV+ ACK++E +VS+ + LG+ G + + IL YE+++ Q L F LIV+ PYRP EGF+ D++ Sbjct: 48 LEPHEELAICKYYEKRLLDFCNAFKPTMPKSVLGTACMYFKRFYLNNSVMEHHPRIIMLTCVFLACKVDEFNVSSIQFVGNLGENPLGQEKILEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDVK 175
BLAST of CX291523 vs. ExPASy Swiss-Prot
Match: CCNH_MACFA (Cyclin-H OS=Macaca fascicularis GN=CCNH PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23 Identity = 58/131 (44.27%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 282 PKPLNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSA-------EELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDME 647 P L EE ++ +YE +L E CS F P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ E G + + IL YE+++ Q L F LIV+ PYRP EGF+ D++ Sbjct: 45 PVFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLK 175
BLAST of CX291523 vs. ExPASy Swiss-Prot
Match: CCNH_HUMAN (Cyclin-H OS=Homo sapiens GN=CCNH PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23 Identity = 58/131 (44.27%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 282 PKPLNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSA-------EELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDME 647 P L EE ++ +YE +L E CS F P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ E G + + IL YE+++ Q L F LIV+ PYRP EGF+ D++ Sbjct: 45 PVFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLK 175
BLAST of CX291523 vs. ExPASy Swiss-Prot
Match: CCNH_RAT (Cyclin-H OS=Rattus norvegicus GN=Ccnh PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = 3 Query: 288 PLNIE--EEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSA-------EELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDME 647 PL +E EE ++ +YE +L E CS F P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ E G + + IL YE+++ Q L F LIV+ PYRP EGF+ D++ Sbjct: 45 PLFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDIK 175
BLAST of CX291523 vs. ExPASy Swiss-Prot
Match: CCNH_BOVIN (Cyclin-H OS=Bos taurus GN=CCNH PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23 Identity = 58/131 (44.27%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 282 PKPLNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSA-------EELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDME 647 P L EE ++ +YE +L E CS F P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ E G + + IL YE+++ Q L F LIV+ PYRP EGF+ D++ Sbjct: 45 PVFLEPHEEITLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKTLEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLK 175
BLAST of CX291523 vs. ExPASy Swiss-Prot
Match: CCNH_MOUSE (Cyclin-H OS=Mus musculus GN=Ccnh PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 58/131 (44.27%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 282 PKPLNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSA-------EELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDME 647 P L EE ++ +YE +L E CS F P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ E G + + IL YE+++ Q L F LIV+ PYRP EGF+ D++ Sbjct: 45 PVFLEPHEELTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQERALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDIK 175
BLAST of CX291523 vs. ExPASy Swiss-Prot
Match: CCNH_DICDI (Putative cyclin-H OS=Dictyostelium discoideum GN=cycH PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22 Identity = 50/131 (38.17%), Postives = 81/131 (61.83%), Query Frame = 3 Query: 276 SRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKN 668 S P L+ ++E S+ +YE K E+ A P+K+ A A++Y KRFYL+ S+M++ K +ML+C++ ACK E+NH+ + I N E+I+ ++L F+LIVY P+RP+ G+I D+ D + N Sbjct: 41 SEPNILSPDDELSLIHYYETKTLEIAMALNLPDKVSAPAIIYIKRFYLKNSIMQYGAKLVMLSCLFIACKTEDNHLDIDYYSNITKASPSDITNLEIIILESLNFNLIVYHPFRPMYGYILDINDNSAIYN 171
BLAST of CX291523 vs. ExPASy Swiss-Prot
Match: CGM2_SCHPO (Cyclin mcs2 OS=Schizosaccharomyces pombe GN=mcs2 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 61/189 (32.28%), Postives = 101/189 (53.44%), Query Frame = 3 Query: 84 FQTSTHRAKWIFTPQELIEKYKASNRRAIQTLEKYGTTQMEVDVDGSFSYPEPQNNAKDNSEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAEELGKGISQ-DHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDME 647 F+ STH WIFT ++L + N + + + ++ + QN + P L +EEE + +Y +L + SA P I++TA+L+FKRFYL SVME+ PK I T ++ A K ++++S E+ K + + + +L YE V Q+L++DL V+ P+RPL+GF+ D + Sbjct: 6 FRDSTHYRDWIFTEEDLSKTRAKVNEKFTNIVRERMLEELSL-----------QNK---EASLEVLPPTLTVEEELELVNYYSFQLNALSSALSLPTHIRSTAILFFKRFYLINSVMEYSPKIISFTSLFLATKCNDHYISIEQFCKNMPKTTPEEVLEYEFNVCQSLKWDLYVWLPFRPLQGFLLDCQ 180 The following BLAST results are available for this feature:
BLAST of CX291523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291523 ID=CX291523; Name=CX291523; organism=Citrus clementina; type=EST; length=706bpback to top |