CX291528

Overview
NameCX291528
Unique NameCX291528
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291528 vs. ExPASy Swiss-Prot
Match: QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 1.133e-103
Identity = 187/213 (87.79%), Postives = 196/213 (92.02%), Query Frame = 2
Query:   80 MSGLYNPN--FSPARAASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEAD 712
            MSGLYN +  FSPARAASPQIRSTP+I+  SQYL+ELLAEHQKL PF QVLPICSRLL QE+FRVSGMM NQGFGDFDRLRHRSPSPMASSNLMSNV+ TGLGGWNGL QERL G PGMTMDWQ AP SPSSYTVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRGKGSIKDP+KEDKLRGRPGYEHLN+ LHILIEAD
Sbjct:    1 MSGLYNNSSYFSPARAASPQIRSTPEID-SSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEAD 212          
BLAST of CX291528 vs. ExPASy Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 370.933 bits (951), Expect = 3.645e-102
Identity = 179/212 (84.43%), Postives = 196/212 (92.45%), Query Frame = 2
Query:   80 MSGLYN-PNFSPARAASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEAD 712
            MSGLYN  NFSP+RAASPQIR TP  ++DSQY+S+LLAEHQKLGPF QVLPICSRLL QEIFR++GMMPNQGF DFDRLRHRSPSPMAS NLMSNV+G GLGGWNGLP ER+GGP GM M+WQ APASPSSY VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP+KE+KL+G+PGYEHLN+ LHILIEAD
Sbjct:    1 MSGLYNYNNFSPSRAASPQIR-TPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEAD 211          
BLAST of CX291528 vs. ExPASy Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26475 OS=Arabidopsis thaliana GN=At4g26475 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.214e-50
Identity = 109/209 (52.15%), Postives = 139/209 (66.51%), Query Frame = 2
Query:   95 NPNFSPARAASPQIRSTPDINIDSQ-YLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGW-NGLPQER-LGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEAD 712
            +PNFS        +RS P   ++ + YLSELLAE  KL PF  VLP   RL+ QEI RV+ ++ N       + R   PSP+AS  +  N +   + GW +  P ER +   P    +W ++P S S   VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KED +RG+PGYEHLN+PLHIL+EA+
Sbjct:   41 SPNFSGG------LRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSPAP--NWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAE 236          
BLAST of CX291528 vs. ExPASy Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.231e-49
Identity = 109/208 (52.40%), Postives = 137/208 (65.87%), Query Frame = 2
Query:   95 NPNFSPARAASPQIRSTPDINIDSQ-YLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGW-NGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEAD 712
            +PN+S        +RS   + ++ + YLSELLAE  KL PF  VLP   RLL QEI RV+ ++ N        L H  PSP+AS  +  N A   + GW +  P ER   P     +W ++P S S    KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KE+ +RG+PGYEHLN+PLHIL+EA+
Sbjct:   45 SPNYSGG------LRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQN-ARADMNGWASQFPSER-SVPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAE 242          
BLAST of CX291528 vs. ExPASy Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.726e-44
Identity = 99/206 (48.06%), Postives = 126/206 (61.17%), Query Frame = 2
Query:  122 ASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQER---------LGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEAD 712
            ASP     P  + + +YL+ELL E QKLGPF QV+P C RLL  EI RVS       F D DR  H SP           +    L GW+ +  E            GP    + W   P  P+   VK+++RL++PVD YP++NFVGR+LGPRGNSLKRVE  T CRV+IRG+GS+KD  KE+KL+G+PGYEHL +PLH+LIEA+
Sbjct:   30 ASPNRSPCPPSDRE-RYLTELLQERQKLGPFLQVMPNCCRLLNHEIRRVSS------FPDLDRYEHGSPFRSLGQPTNGKL---DLEGWSMMQAEENCHLQRASPFRGPS--PVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAE 223          
BLAST of CX291528 vs. ExPASy Swiss-Prot
Match: HOW_DROME (Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20
Identity = 65/194 (33.51%), Postives = 94/194 (48.45%), Query Frame = 2
Query:  131 QIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEAD 712
            Q +ST  I   + YL++LL + ++L  F  V     RLL +EI RV                                    L   NG+ +E L  P             P    V    ++ +PV  +P+FNFVGR+LGPRG + K++E  TGC++ +RGKGS++D  KED  RG+P +EHL+D LH+LI  +
Sbjct:   68 QQQSTQSI---ADYLAQLLKDRKQLAAFPNVFTHVERLLDEEIARVRA---------------------------------SLFQINGVKKEPLTLP------------EPEGSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVE 213          
BLAST of CX291528 vs. ExPASy Swiss-Prot
Match: QKI_RAT (Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20
Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 2
Query:  491 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEAD 712
            +L +PV  YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KE++ RG+P +EHLN+ LH+LI  +
Sbjct:   85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVE 158          
BLAST of CX291528 vs. ExPASy Swiss-Prot
Match: QKI_PIG (Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20
Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 2
Query:  491 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEAD 712
            +L +PV  YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KE++ RG+P +EHLN+ LH+LI  +
Sbjct:   85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVE 158          
BLAST of CX291528 vs. ExPASy Swiss-Prot
Match: QKI_MOUSE (Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20
Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 2
Query:  491 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEAD 712
            +L +PV  YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KE++ RG+P +EHLN+ LH+LI  +
Sbjct:   85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVE 158          
BLAST of CX291528 vs. ExPASy Swiss-Prot
Match: QKI_HUMAN (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20
Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 2
Query:  491 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEAD 712
            +L +PV  YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KE++ RG+P +EHLN+ LH+LI  +
Sbjct:   85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVE 158          
The following BLAST results are available for this feature:
BLAST of CX291528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
QKIL3_ARATH1.133e-10387.79KH domain-containing protein At2g38610 OS=Arabidop... [more]
QKIL4_ARATH3.645e-10284.43KH domain-containing protein At3g08620 OS=Arabidop... [more]
QKIL1_ARATH7.214e-5052.15KH domain-containing protein At4g26475 OS=Arabidop... [more]
QKIL2_ARATH1.231e-4952.40KH domain-containing protein At5g56140 OS=Arabidop... [more]
QKIL5_ARATH7.726e-4448.06KH domain-containing protein At1g09660 OS=Arabidop... [more]
HOW_DROME1.200e-2033.51Protein held out wings OS=Drosophila melanogaster ... [more]
QKI_RAT2.047e-2055.41Protein quaking OS=Rattus norvegicus GN=Qki PE=1 S... [more]
QKI_PIG2.047e-2055.41Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1[more]
QKI_MOUSE2.047e-2055.41Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1[more]
QKI_HUMAN2.047e-2055.41Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC03010C08SK OF2 Citrus clementina cDNA clone C03010C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291528 ID=CX291528; Name=CX291528; organism=Citrus clementina; type=EST; length=712bp
GATTCGGCCGAGGCCTCGTGCCGATTCGGCACGAGGGTTTGTTCTAAATC
CTCTAAAAAAGCAAGACAGTCACAAAGCCATGTCAGGTTTGTATAATCCC
AACTTCTCACCTGCAAGAGCTGCTTCTCCACAAATTAGAAGCACCCCAGA
TATTAATATTGACAGTCAATACTTGTCAGAGCTTTTAGCTGAGCATCAAA
AGCTAGGACCTTTCACACAGGTGCTTCCGATATGCAGCCGACTGTTAACT
CAAGAGATATTTCGGGTTTCTGGGATGATGCCCAATCAAGGATTTGGTGA
CTTTGACAGACTGCGGCATAGAAGCCCCAGCCCCATGGCTTCTTCAAATC
TTATGTCAAACGTTGCAGGTACAGGGTTAGGTGGCTGGAATGGCCTACCT
CAGGAGAGATTAGGTGGACCTCCTGGCATGACGATGGATTGGCAAAGTGC
ACCTGCAAGCCCTAGTTCATATACAGTCAAGAGAATTTTGCGTTTGGAAA
TTCCAGTGGATACTTATCCTAACTTCAATTTTGTTGGACGGCTTCTTGGT
CCAAGGGGCAATTCACTGAAACGGGTTGAAGCTACTACTGGCTGCCGTGT
GTACATTAGAGGGAAGGGCTCAATAAAGGATCCAGACAAGGAAGATAAGC
TAAGGGGAAGGCCAGGCTATGAGCATCTCAATGATCCACTTCACATCTTA
ATTGAGGCTGAT
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