CX291529

Overview
NameCX291529
Unique NameCX291529
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4180 contig Ccv1_Contig4180:170..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291529 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.731e-46
Identity = 95/231 (41.13%), Postives = 138/231 (59.74%), Query Frame = 2
Query:   38 DRGTKSLEEELQERTRKALRKSSNDPTATMKLIDTIQRLGIGYHFEDEIMERLERFSDGDAAGEENLFENALRFRLLRHNGLPACTDIFKKFINKEGKLKESVSKDTRGMLSLYEASYLATQDKDILFEAMEFTKTELTQSVSLMDSQSSRHVVQALALPRHLRMSRSEAGNYINEYSQSWNHDQTLLQLAKSDFNMVQSLHQRELAEIKRWWKQLGLVDKLGFGRDRPLE 730
            D GT+   ++L+E  RK +     + T  +  ID++QRLG+ YHF  EI + LE     +   E +L+  +LRFRLLR +G     D+F KF +++G  K SV+ D +G+L LY+ASYL    +DIL EA+ FT   L+ +VS +D   S  V  AL       + R EA +Y++ Y    +H++ LL+ AK DFNM+Q LH++EL+EI RWWK L    KL + RDR +E
Sbjct:   45 DAGTEKRHQQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNNDAENDLYTTSLRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVQGLLELYQASYLRVHGEDILDEAISFTTNHLSLAVSSLDHPLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESHNKALLEFAKIDFNMLQFLHRKELSEICRWWKDLDFQRKLPYARDRVVE 275          
BLAST of CX291529 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.791e-46
Identity = 95/231 (41.13%), Postives = 137/231 (59.31%), Query Frame = 2
Query:   38 DRGTKSLEEELQERTRKALRKSSNDPTATMKLIDTIQRLGIGYHFEDEIMERLERFSDGDAAGEENLFENALRFRLLRHNGLPACTDIFKKFINKEGKLKESVSKDTRGMLSLYEASYLATQDKDILFEAMEFTKTELTQSVSLMDSQSSRHVVQALALPRHLRMSRSEAGNYINEYSQSWNHDQTLLQLAKSDFNMVQSLHQRELAEIKRWWKQLGLVDKLGFGRDRPLE 730
            D  T+   ++L+E  RK +     + T  +  ID++QRLG+ YHF  EI + LE     +   E +L+  +LRFRLLR +G     D+F KF +++G  K SV+ D RG+L LY+ASYL    +DIL EA+ FT   L+ +V+ +D   S  V  AL       + R EA +Y++ Y    +H++ LL+ AK DFNMVQ LH++EL+EI RWWK L    KL + RDR +E
Sbjct:   45 DAETEKRHQQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNNDAENDLYTTSLRFRLLREHGFNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTNHLSLAVASLDYPLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESHNKVLLEFAKIDFNMVQLLHRKELSEISRWWKDLDFQRKLPYARDRVVE 275          
BLAST of CX291529 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.341e-45
Identity = 94/231 (40.69%), Postives = 136/231 (58.87%), Query Frame = 2
Query:   38 DRGTKSLEEELQERTRKALRKSSNDPTATMKLIDTIQRLGIGYHFEDEIMERLERFSDGDAAGEENLFENALRFRLLRHNGLPACTDIFKKFINKEGKLKESVSKDTRGMLSLYEASYLATQDKDILFEAMEFTKTELTQSVSLMDSQSSRHVVQALALPRHLRMSRSEAGNYINEYSQSWNHDQTLLQLAKSDFNMVQSLHQRELAEIKRWWKQLGLVDKLGFGRDRPLE 730
            D  T+   ++L+E  RK +     + T  +  ID++Q LG+ YHF  EI + LE     +   E +L+  +LRFRLLR +G     D+F KF +++G  K SV+ D RG+L LY+ASYL    +DIL EA+ FT   L+ +V+ +D   S  V  AL       + R EA +Y++ Y    +H++ LL+ AK DFNMVQ LH++EL+EI RWWK L    KL + RDR +E
Sbjct:   45 DAETQKRHQQLKEEVRKMIVAPMANSTLKLAFIDSVQGLGVSYHFTKEIEDELENIYHNNNDAENDLYTTSLRFRLLREHGFHVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTSNHLSLAVASLDHPLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESHNKVLLEFAKIDFNMVQLLHRKELSEISRWWKDLDFQRKLPYARDRVVE 275          
BLAST of CX291529 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.269e-44
Identity = 93/231 (40.26%), Postives = 137/231 (59.31%), Query Frame = 2
Query:   38 DRGTKSLEEELQERTRKALRKSSNDPTATMKLIDTIQRLGIGYHFEDEIMERLERFSDGDAAGEENLFENALRFRLLRHNGLPACTDIFKKFINKEGKLKESVSKDTRGMLSLYEASYLATQDKDILFEAMEFTKTELTQSVSLMDSQSSRHVVQALALPRHLRMSRSEAGNYINEYSQSWNHDQTLLQLAKSDFNMVQSLHQRELAEIKRWWKQLGLVDKLGFGRDRPLE 730
            D  T+   ++L+E  RK +     + T  +  ID++QRLG+ YHF  EI + LE     +   E +L+  ++RFRLLR +G     D+F KF +++G  K SV+ D RG+L LY+ASYL    +DIL EA+ FT   L+ +V+ +D   S  V  AL       + R EA +Y++ Y    +H++ LL+ AK DFNM+Q LH++EL+EI RWWK L    KL + RDR +E
Sbjct:   45 DAETEKRHQQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNNDAENDLYTTSIRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTHHLSLAVASLDHPLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESHNKALLEFAKIDFNMLQFLHRKELSEICRWWKDLDFQRKLPYARDRVVE 275          
BLAST of CX291529 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.075e-43
Identity = 97/235 (41.28%), Postives = 139/235 (59.15%), Query Frame = 2
Query:   38 DRGTKSLEEELQERTRKALRKSSNDPTATMKLIDTIQRLGIGYHFEDEIMERLERF----SDGDAAGEENLFENALRFRLLRHNGLPACTDIFKKFINKEGKLKESVSKDTRGMLSLYEASYLATQDKDILFEAMEFTKTELTQSVSLMDSQSSRHVVQALALPRHLRMSRSEAGNYINEYSQSWNHDQTLLQLAKSDFNMVQSLHQRELAEIKRWWKQLGLVDKLGFGRDRPLE 730
            D  T+   EEL+ + RK + +  +D    +  ID +QRLG+ YHFE EI + LE      ++ DA  + +L+  ALRFRLLR +G     D F KF ++ G  K S++ D +G+L LYEASY+    +DIL EA+ FT  +LT ++  +    S  V  AL       + R EA N+I+ Y    +H+++LLQ AK DFN++Q LH++EL+EI RWWK L    KL F RDR +E
Sbjct:   44 DAATELQYEELKAQVRKMIMEPVDDSNQKLPFIDAVQRLGVSYHFEKEIEDELENIYRDTNNNDA--DTDLYTTALRFRLLREHGFDISCDAFNKFKDEAGNFKASLTSDVQGLLELYEASYMRVHGEDILDEAISFTTAQLTLALPTLHHPLSEQVGHALKQSIRRGLPRVEARNFISIYQDLESHNKSLLQFAKIDFNLLQLLHRKELSEICRWWKDLDFTRKLPFARDRVVE 276          
BLAST of CX291529 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.552e-42
Identity = 97/244 (39.75%), Postives = 145/244 (59.43%), Query Frame = 2
Query:   20 RITYEGDRGTKSLEEELQERTRKALRKSSNDPTATMKLIDTIQRLGIGYHFEDEIMERLERFSDGDAAGE----ENLFENALRFRLLRHNGLPACTDIFKKFINKEGKLKESVSKDTRGMLSLYEASYLATQDKDILFEAMEFTKTELTQSVSLMDSQSSRHVVQ-ALALPRHLRMSRSEAGNYINEYSQSWNHDQTLLQLAKSDFNMVQSLHQRELAEIKRWWKQLGLVDKLGFGRDRPLECF 736
            RI Y G+  T+ +   L+E+ R  L K  N P   ++LI+ +QRLG+ YHFE+EI   L+   + D  G+    ENL+  AL+FRLLR +G     ++F  F ++ G  K  + +DT+GMLSLYEAS+   + ++IL EA +F+   L + V     ++   +V  +L  P H RM R EA  +IN Y  + + +  LL+ A+ DFN+VQ+ HQ +L ++  WWK  GLV+ L F RDRP+E F
Sbjct:   76 RIEYVGETCTRQINV-LKEQVRMMLHKVVN-PLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLLRQHGYSVSQEVFNSFKDERGSFKACLCEDTKGMLSLYEASFFLIEGENILEEARDFSTKHLEEYVKQNKEKNLATLVNHSLEFPLHWRMPRLEARWFINIYRHNQDVNPILLEFAELDFNIVQAAHQADLKQVSTWWKSTGLVENLSFARDRPVENF 317          
BLAST of CX291529 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.552e-42
Identity = 96/250 (38.40%), Postives = 149/250 (59.60%), Query Frame = 2
Query:   23 ITYEGDR--GTKSLEEELQERTRKALRKSSNDPTA---TMKLIDTIQRLGIGYHFEDEIMERLER----FSDGDAAGEENLFENALRFRLLRHNGLPACTDIFKKFINKEGKLKESVSKDTRGMLSLYEASYLATQDKDILFEAMEFTKT---ELTQSVSLMDSQSSRHVVQALALPRHLRMSRSEAGNYINEYSQSWNHDQTLLQLAKSDFNMVQSLHQRELAEIKRWWKQLGLVDKLGFGRDRPLECF 736
            + Y+ D   G + + ++L+E  +  L  + N PT     +K ID I+RLGI Y+FE+EI +  +     + D    G  +L+     FRL+R +G    +DIF  + +KEG+ KES+ KD  G+L LYEA+Y+    + IL +A+ FT+T   E+ ++ SL +S  S  + +AL  P H R+ R EA  YI  Y Q  +H +TLL+LAK  FN +QSLH++EL+ I +WWK   + + L + R+RP+EC+
Sbjct:   25 LAYDQDEQEGVEQVIKDLKEEVKSELLTALNSPTQHTELLKFIDAIERLGIAYYFEEEINQVFQHMYTAYGDKWTGGNTSLW-----FRLMRQHGFFVSSDIFSTYKDKEGRFKESLEKDVHGLLELYEAAYMFVPGEGILDDALVFTRTCLDEIAKNPSLSNSAVSSQIREALTQPLHKRLPRLEALRYIPFYQQQASHSETLLKLAKLGFNQLQSLHKKELSIISKWWKSFDVANNLPYARNRPVECY 269          
BLAST of CX291529 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.414e-40
Identity = 91/228 (39.91%), Postives = 133/228 (58.33%), Query Frame = 2
Query:   68 LQERTRKALRKSSNDPTATMKLIDTIQRLGIGYHFEDEIMERLERF--SDGDAAGEE--NLFENALRFRLLRHNGLPACTDIFKKFINKEGKLKESVSKDTRGMLSLYEASYLATQDKDILFEAMEFTKTELTQSVSLMDSQSSRHVVQALALPRHLRMSRSEAGNYINEYSQSWN-HDQTLLQLAKSDFNMVQSLHQRELAEIKRWWKQLGLVDKLGFGRDRPLECF 736
            L+++ +  L  S++D   T+ LID + RLG+ YHFE++I E L +   S  D   E+  +L+  A+ FR+ R +G    +D+F KF + +GK KES+  D +GMLSL+EAS+L+   +DIL EA  FTK  L  S   +     RH+  AL  P H  + R EA  +I+ Y       ++TLL+ AK D+N VQ LHQ+EL +  +WWK L L   + + RDR  E F
Sbjct:   98 LKKKVKDILISSTSDSVETVILIDLLCRLGVSYHFENDIEELLSKIFNSQPDLVDEKECDLYTAAIVFRVFRQHGFKMSSDVFSKFKDSDGKFKESLRGDAKGMLSLFEASHLSVHGEDILEEAFAFTKDYLQSSAVELFPNLKRHITNALEQPFHSGVPRLEARKFIDLYEADIECRNETLLEFAKLDYNRVQLLHQQELCQFSKWWKDLNLASDIPYARDRMAEIF 325          
BLAST of CX291529 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 6.102e-39
Identity = 90/226 (39.82%), Postives = 135/226 (59.73%), Query Frame = 2
Query:   62 EELQERTRKALRKSSNDPTATMKLIDTIQRLGIGYHFEDEIMERLERFSDGDAAGEENLFENALRFRLLRHNGLPACTDIFKKFINKEGKLKESVSKDTRGMLSLYEASYLATQDKDILFEAMEFTKTELTQSVSLMDSQSSRHVVQALALPRHLRMSRSEAGNYINE-YSQSWNHDQTLLQLAKSDFNMVQSLHQRELAEIKRWWKQLGLVDKLGFGRDRPLECF 736
            E L+E+TR  L  +      T+ LIDTI+RLGI YHFE EI + L++  + ++   + L  +AL+FRLLR +G     +IF KF ++ GK KES++ D  G+L+LYEAS++ T   DIL +A+ F+   L  +   + S     V  AL    H  + R E   +I+  Y +  + +  LL+ AK DFN++Q LH++ELA++ RWWK L  V  L + RDR +EC+
Sbjct:   47 EALKEQTRNMLLATGMKLADTLNLIDTIERLGISYHFEKEIDDILDQIYNQNSNCND-LCTSALQFRLLRQHGFNISPEIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLESAAPHLKSPLREQVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQELAQVSRWWKDLDFVTTLPYARDRVVECY 271          
BLAST of CX291529 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36
Identity = 101/250 (40.40%), Postives = 143/250 (57.20%), Query Frame = 2
Query:   23 ITYEGDRGTKSLEEELQERTRKALRKSSNDPTATMKLIDTIQRLGIGYHFEDEIMERL-ERFSDGDAAGEEN--LFENALRFRLLRHNGLPACTDIFKKFIN-KEGKLKESVSKDTRGMLSLYEASYLATQDKDILFEAMEFTKTELTQSVSLMDSQSSRHVV-------QALALPRHLRMSRSEAGNYINE-YSQSWNHDQTLLQLAKSDFNMVQSLHQRELAEIKRWWKQLGLVDKLGFGRDRPLECF 736
            I Y+G+  T  L +   E+  K +     +  A ++LIDTIQRLGI Y FE+EI+  L E+F++ +     N  L+  AL+FRLLR  G     +IF  F N K G+ K ++S D  G L LYEAS+   + + IL EA  FT T+  +   LM S ++ ++         AL +P   R++RSEA  +I E Y +  + + TLL+ AK DFNM+QS +Q EL  + RWWK   L +KL F RDR +ECF
Sbjct:   97 IQYKGESYTSRLNK--LEKDVKRMLIGVENSLAQLELIDTIQRLGISYRFENEIISILKEKFTNNNDNPNPNYDLYATALQFRLLRQYGFEVPQEIFNNFKNHKTGEFKANISNDIMGALGLYEASFHGKKGESILEEARIFT-TKCLKKYKLMSSSNNNNMTLISLLVNHALEMPLQWRITRSEAKWFIEEIYERKQDMNPTLLEFAKLDFNMLQSTYQEELKVLSRWWKDSKLGEKLPFVRDRLVECF 343          
The following BLAST results are available for this feature:
BLAST of CX291529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
DCS4_GOSAR6.731e-4641.13(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
DCS2_GOSAR8.791e-4641.13(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
DCS1_GOSHI3.341e-4540.69(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
DCS1_GOSAR1.269e-4440.26(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS3_GOSAR1.075e-4341.28(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
MYRS_QUEIL1.552e-4239.75Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
ECS1_ARTAN1.552e-4238.40Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]
CASS_RICCO9.414e-4039.91Casbene synthase, chloroplastic OS=Ricinus communi... [more]
5EAS_TOBAC6.102e-3939.82Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
TPS1_CANSA3.702e-3640.40(-)-limonene synthase, chloroplastic OS=Cannabis s... [more]

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Properties
Property NameValue
Genbank descriptionC03010C09SK OF2 Citrus clementina cDNA clone C03010C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291529 ID=CX291529; Name=CX291529; organism=Citrus clementina; type=EST; length=737bp
GATTCGGCCGAGGGTCAAACGTATTACATATGAAGGTGATCGTGGTACCA
AGAGCTTGGAAGAAGAATTGCAAGAGAGAACAAGGAAGGCTCTGAGGAAA
TCTAGCAATGATCCAACGGCTACAATGAAGTTGATCGACACCATTCAGCG
GCTGGGAATAGGGTACCATTTTGAAGATGAAATTATGGAACGACTTGAAA
GGTTTTCCGACGGAGATGCAGCCGGTGAAGAAAATCTCTTTGAAAATGCA
CTTCGTTTTAGGTTGCTGAGGCATAATGGATTACCAGCTTGCACCGATAT
TTTCAAGAAATTTATTAACAAGGAAGGGAAGCTAAAGGAGTCCGTGTCGA
AAGATACACGGGGTATGTTGAGTTTGTATGAGGCATCTTACTTGGCCACA
CAAGATAAAGACATATTATTTGAAGCCATGGAATTCACAAAAACTGAACT
CACACAGTCAGTATCACTTATGGATTCACAATCCAGTAGGCATGTTGTTC
AAGCCTTGGCACTTCCTAGGCACTTGAGGATGTCGAGATCTGAAGCTGGA
AACTACATTAATGAATATAGCCAATCATGGAACCATGACCAGACTCTGCT
TCAACTTGCAAAGTCAGATTTTAATATGGTTCAGTCATTGCACCAAAGAG
AGTTGGCTGAGATAAAAAGGTGGTGGAAGCAATTGGGTCTAGTTGACAAA
CTTGGCTTCGGTAGAGATAGACCATTAGAGTGCTTCT
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