CX291535

Overview
NameCX291535
Unique NameCX291535
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX291535 vs. ExPASy Swiss-Prot
Match: FBL10_ARATH (F-box/LRR-repeat protein 10 OS=Arabidopsis thaliana GN=FBL10 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.239e-43
Identity = 91/157 (57.96%), Postives = 115/157 (73.25%), Query Frame = 2 
Query:    2 ILTLATCRVPISELRVRQCPLIGDTSVIALASMLVDDDRWYGSSIRLLDLYNCGGITQLAFRWLKKPYFPRLRWLGVTGSVNRDILDALARSRPFLNVACRGEEL---GVDQWDNSDGMYMHDYDEVDELEQWLM------EGEDESDNDEEMANAE 445
            I  LA    PI++L++R+C LIGD SV+ALAS  V +D   GSS+ LLDLY+CGGITQL+F+WLKKP+FPRL+WLG+TGSVNRDI+DALAR RP L V+CRGEEL   G D WD++D ++ H   + DELEQW++      E ED  D  EE A+ E
Sbjct:  500 IFALAKSGAPITKLQLRECRLIGDASVMALASTRVYEDECPGSSLCLLDLYDCGGITQLSFKWLKKPFFPRLKWLGITGSVNRDIVDALARRRPHLQVSCRGEELGNDGEDDWDSAD-IHQHIEAQEDELEQWILGDEGDVEMEDAEDESEEDASEE 655
The following BLAST results are available for this feature:
BLAST of CX291535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FBL10_ARATH2.239e-4357.96F-box/LRR-repeat protein 10 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionC03010D03SK OF2 Citrus clementina cDNA clone C03010D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291535 ID=CX291535; Name=CX291535; organism=Citrus clementina; type=EST; length=708bp
GATTTTGACACTGGCAACATGTCGGGTGCCAATCTCAGAACTCCGAGTGC
GACAATGTCCGCTGATAGGTGACACCTCTGTTATTGCACTGGCCTCAATG
CTGGTTGATGACGACAGATGGTATGGTAGTAGCATAAGGTTGTTGGATCT
TTATAACTGTGGTGGCATAACACAGCTTGCATTCCGGTGGTTAAAGAAAC
CTTACTTTCCAAGGTTGAGATGGTTGGGAGTGACAGGGAGTGTAAATAGA
GATATCTTAGATGCTTTAGCCAGGAGTAGACCATTCCTGAACGTGGCTTG
CCGTGGTGAGGAACTGGGTGTTGACCAGTGGGATAACTCTGATGGTATGT
ACATGCATGACTATGATGAGGTCGACGAACTTGAGCAGTGGCTTATGGAA
GGAGAGGACGAGAGTGACAACGACGAGGAGATGGCCAATGCAGAAATCAA
TGCAGAACCAATGGAGTAATTTGCTAAGATAAGGTTTCACCTTGTATGTA
TGCATGTACGTGTAACTTATATCAGTTTTCACTGATTGTGTATATCTACA
TACTGTTAACTCTTACATGTAAATTTGTGTTTAAATTTCGCAAAGCCTTG
AGTTTGCTTTCGCTTTTGAACACTGTTGATTGTAGTTCTTTGCTAAATAC
TCCACAGGATTTCATTTTGCTACGAAATGATTAAAAATGAAACAGGCTTT
GCTATGAT
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