CX291541

Overview
NameCX291541
Unique NameCX291541
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291541 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.300e-25
Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = -3
Query:  250 GLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTLDNVVLSPHIAVLTAESFAALEQVVIGNLEAF 705
            G G IG  +A+R   FG  I Y SR +KP V     A    +  L  +SD +++   LT+ET+HMIN++ +  +    +++N+ RG ++D + LV  L  G + GAGLDVFE+EP+  +EL +LDNVVL+PHI   T  +   + ++V  NL AF
Sbjct:  157 GFGRIGQAIARRAKGFGMRILYNSRTRKPEVEKELGAEFMPLDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEPYYHEELFSLDNVVLAPHIGSATYGAREGMAELVARNLIAF 311          
BLAST of CX291541 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.781e-25
Identity = 63/155 (40.65%), Postives = 92/155 (59.35%), Query Frame = -3
Query:  250 GLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTLDNVVLSPHIAVLTAESFAALEQVVIGNLEAF 705
            G G IG  +AKR   F   I Y SR +KP V     A    +  L  +SD +++   L +ET+HMIN++ +  + +  ++INV RG +ID K L+  L  G + GAGLDV+E+EP+  +EL +LDNVVL+PHI   T  +   + ++V  NL AF
Sbjct:  158 GFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAF 312          
BLAST of CX291541 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.437e-24
Identity = 62/155 (40.00%), Postives = 90/155 (58.06%), Query Frame = -3
Query:  250 GLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTLDNVVLSPHIAVLTAESFAALEQVVIGNLEAF 705
            GLG IG  +AKR   F   I Y SR +K  V     A    +  L  +SD +++   LT ET+H+IN++ +  + K  ++IN+ RG ++D   LV  L  G + GAGLDVFE+EP+  +EL  LDNVVL+PHI   +  +   + ++V  NL AF
Sbjct:  157 GLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAF 311          
BLAST of CX291541 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.451e-24
Identity = 59/155 (38.06%), Postives = 92/155 (59.35%), Query Frame = -3
Query:  250 GLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTLDNVVLSPHIAVLTAESFAALEQVVIGNLEAF 705
            G G IG  VA+R   FG  I Y SR +KP         + ++  L  +SD +++   LT+ET +MIN++ +  + K  +++N+ RG ++D K L+  L  G + GAGLDV+E+EP+  +EL +L NVVL+PHI   T  +   + ++V  NL AF
Sbjct:  157 GFGRIGQAVARRARGFGMRILYYSRSRKPEAEKELGAEFRSLEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEPYYNEELFSLKNVVLAPHIGSATYGAREGMAELVARNLIAF 311          
BLAST of CX291541 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.201e-24
Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = -3
Query:  250 GLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTLDNVVLSPHIAVLTAESFAALEQVVIGNLEAF 705
            G G IG  +AKR   FG  I Y SR +KP         Y +   L  +SD + +   LT+ET+HMI +  +  +    ++IN  RGA++D   L+  L  G + GAGLDVFE+EP+  +EL  L NVVL+PHI   T E+   + ++V  NL AF
Sbjct:  157 GFGRIGQALAKRAKGFGMKIIYYSRTRKPEAEEEIGAEYVDFETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEPYYNEELFKLKNVVLAPHIGSATHEAREGMAELVAKNLIAF 311          
BLAST of CX291541 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.181e-24
Identity = 60/155 (38.71%), Postives = 91/155 (58.71%), Query Frame = -3
Query:  250 GLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTLDNVVLSPHIAVLTAESFAALEQVVIGNLEAF 705
            G G IG  +A+R   F   I Y SR +K          Y  +  +  +SD +I+   LT+ET +MIN++ +  +    +++N+ RG ++D K L+  L  G + GAGLDVFE+EP+  +EL +LDNVVL+PHI   T E+  A+ ++V  NL AF
Sbjct:  157 GFGRIGQAIARRAKGFNMRILYYSRTRKSQAEKELGAEYRPLEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEPYYNEELFSLDNVVLTPHIGSATFEAREAMAELVARNLIAF 311          
BLAST of CX291541 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.710e-23
Identity = 58/155 (37.42%), Postives = 89/155 (57.42%), Query Frame = -3
Query:  250 GLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTLDNVVLSPHIAVLTAESFAALEQVVIGNLEAF 705
            G G IG  VA+R   FG  I Y SR +KP       A    +  L  +SD +++   LT+ET+HMI +  +  +    +++N+ RG ++D + L+  L  G + GAGLDVFE+EP+  +EL +L NV+L+PHI   T  +   + ++V  NL AF
Sbjct:  157 GFGRIGQAVARRAKGFGMRILYYSRTRKPEAEEELKAEFKPLEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEPYYNEELFSLKNVILAPHIGSATFGAREGMAELVARNLIAF 311          
BLAST of CX291541 vs. ExPASy Swiss-Prot
Match: GHRB_ERWT9 (Glyoxylate/hydroxypyruvate reductase B OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=ghrB PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.996e-22
Identity = 63/161 (39.13%), Postives = 90/161 (55.90%), Query Frame = -3
Query:  238 GLGSIGSEVAKRL-VPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP-HVPKELLTLDNVVLSPHIAVLTAESFAALEQVVIGNLEAFFSNK 705
            G+G IG  +A+R  + FG  I Y +RK        F   Y ++  L A+SD L +   LTE+THH+I ++ +  + +  ++IN GRG ++DE+ L+  L  G L  AGLDVFE EP  V  ELL L NVV  PHI   T E+   + +  + NL A  + K
Sbjct:  152 GMGRIGLALAQRAHLGFGMPILYNARKHHDEAEQRFDAEYCDLDTLLAESDFLCISLPLTEQTHHLIGREQLAKMKRSAILINAGRGPVVDEQALIAALKDGTLHAAGLDVFEQEPLPVSSELLALRNVVALPHIGSATHETRYGMAKDAVDNLIAALNGK 312          
BLAST of CX291541 vs. ExPASy Swiss-Prot
Match: GHRB_SERP5 (Glyoxylate/hydroxypyruvate reductase B OS=Serratia proteamaculans (strain 568) GN=ghrB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21
Identity = 61/156 (39.10%), Postives = 87/156 (55.77%), Query Frame = -3
Query:  253 GLGSIGSEVAKRL-VPFGCSIAYTSRKKKPGVSYPFYA---NVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP-HVPKELLTLDNVVLSPHIAVLTAESFAALEQVVIGNLEA 705
            G+G IG  +A+R    FG  + Y +R+        F A   ++  L A+SD + +   LT+ET HMI++D +  + K G++IN GRG ++DE  L+  L  G +  AGLDVFE EP  V   LLTL NVV  PHI   T E+   + +  + NL A
Sbjct:  152 GMGRIGLALAQRAHFGFGMPVLYNARRTHEEAEQRFNARRCDLDTLLAESDFICITLPLTDETFHMISRDQLAKMKKSGILINAGRGPVVDEAALIEALQNGTIHAAGLDVFEKEPLPVSSPLLTLPNVVALPHIGSATHETRYGMAECAVDNLIA 307          
BLAST of CX291541 vs. ExPASy Swiss-Prot
Match: GYAR_AERPE (Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.313e-21
Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = -3
Query:  238 GLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLT-LDNVVLSPHIAVLTAESFAALEQVVIGNLEAFFSNK 705
            G+G IGS VA+    FG  I Y SR +K  +       Y ++  L  +SD+L +   LT+ET H+I +  +  + K  +++N GRGA++D   LV  L  G +  A LDVFE+EP  P   LT   NVVL+PH A  T E+   +  +   NL AF   K
Sbjct:  158 GMGRIGSRVAEIGKAFGMRIIYHSRSRKREIEKELGAEYRSLEDLLRESDILSIHLPLTDETRHLIGESELKLMKKTAILVNTGRGAIVDTGALVKALREGWIAAAALDVFEEEPLNPNHPLTAFKNVVLAPHAASATRETRLRMAMMAAENLVAFAQGK 317          
The following BLAST results are available for this feature:
BLAST of CX291541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
GYAR_THEON1.300e-2540.00Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_PYRAB3.781e-2540.65Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_PYRHO1.437e-2440.00Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_PYRKO2.451e-2438.06Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_THELI3.201e-2440.00Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_PYRFU4.181e-2438.71Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_THEGJ2.710e-2337.42Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GHRB_ERWT92.996e-2239.13Glyoxylate/hydroxypyruvate reductase B OS=Erwinia ... [more]
GHRB_SERP51.942e-2139.10Glyoxylate/hydroxypyruvate reductase B OS=Serratia... [more]
GYAR_AERPE3.313e-2138.13Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR P... [more]

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Properties
Property NameValue
Genbank descriptionC03010D09SK OF2 Citrus clementina cDNA clone C03010D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291541 ID=CX291541; Name=CX291541; organism=Citrus clementina; type=EST; length=731bp
ACAAACATCATTTGAGACAAAGAGCTCTTTGGTTACATAAGACTTCTTCA
GTTGCTTTTCTCTCTAACAAATGACTCCGCATCAAAAGAAGCTTGACATT
ATGCTGATCAACATGAAATTGATCCACTCTTGATTTGTTGAGCTATGTAC
ACCATTCAGCACGCGTCTTCAAACTATAATGTGAGGCAGAGAACACAAGA
AATTCCTTCACTCAAGCTGGACGGGCGACAGCAAAGGTTTATTTGAGAAA
AATGCCTCTAAATTGCCTATGACCACTTGCTCCAATGCTGCAAATGATTC
TGCAGTCAGCACAGCAATATGTGGAGACAACACAACATTATCCAATGTAA
GCAGCTCCTTTGGCACATGAGGCTCGTCCTCAAACACATCAAGACCAGCT
CCACCAAGCTCCCCCCGCACCAAGAAGTGAACCAGTTCCTTCTCATCAAT
AAGAGCACCGCGCCCAACATTTATTATCACCCCTTCCTTGCCCAGTGCTG
TCATGACATCCTTGTTAATCATGTGGTGAGTTTCCTCGGTCAGAGCACAA
CACACAATGAGGACATCACTATCAGCAGCAAGGCCAGAAACATTTGCATA
AAAAGGATACGAAACACCTGGCTTTTTCTTTCTTGATGTGTAAGCAATGC
TACAGCCGAAGGGCACAAGCCTTTTTGCAACTTCAGAGCCTATGCTACCC
AACCCACAATCCCAACTCGCTTTCCTCCCAA
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