CX291571

Overview
NameCX291571
Unique NameCX291571
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10441 contig Ccv1_Contig10441:784..1488. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PALY_STYHU (Phenylalanine ammonia-lyase OS=Stylosanthes humilis GN=PAL17.1 PE=2 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 6.816e-117
Identity = 210/236 (88.98%), Postives = 222/236 (94.07%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGFG--FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +LTGRPNSKA GPNGE ++A+EA + AG G  FFELQPKEGLALVNGT VGSGLAS+VLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  AKKLHEIDPLQKPKQDRYALRTSPQWLGP +EVIRF+TKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVNDFYNNGLPSNLS  RNPS
Sbjct:  214 LLTGRPNSKAVGPNGETLNAKEAFQAAGIGSDFFELQPKEGLALVNGTPVGSGLASVVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAVASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPS 449          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 417.927 bits (1073), Expect = 2.590e-116
Identity = 209/236 (88.56%), Postives = 224/236 (94.92%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +LTGRPNSKA GP+GEI++A+EA + AG   GFFELQPKEGLALVNGTAVGSGLAS+VLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV  AKKLHE+DPLQKPKQDRYALRTSPQWLGP IEVIRF+TKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKL+FAQFSELVNDFYNNGLPSNLS  RNPS
Sbjct:  223 LLTGRPNSKAHGPSGEILNAREAFQSAGINDGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPS 458          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PALY_POPTR (Phenylalanine ammonia-lyase OS=Populus trichocarpa GN=PAL PE=2 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.383e-116
Identity = 208/236 (88.14%), Postives = 220/236 (93.22%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +LTGRPNSKATGP GE++DA EA K AG   GFFELQPKEGLALVNGTAVGSGLASMVLFE N LA+LSE+LSAIFAEVM GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+Y+  AKKLHE DPLQKPKQDRYALRTSPQWLGPQIEVIRF+TKSIEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDN RLAIA+IGKL+FAQFSELVNDFYNNGLPSNL+  RNPS
Sbjct:  214 LLTGRPNSKATGPTGEVLDAAEAFKAAGIESGFFELQPKEGLALVNGTAVGSGLASMVLFETNVLAVLSELLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYMKAAKKLHETDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNVRLAIASIGKLLFAQFSELVNDFYNNGLPSNLTASRNPS 449          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PALY_MEDSA (Phenylalanine ammonia-lyase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 417.157 bits (1071), Expect = 4.418e-116
Identity = 209/236 (88.56%), Postives = 222/236 (94.07%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGFG--FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +LTGRPNSKA GP+GE+++A+EA   AG    FFELQPKEGLALVNGTAVGSGLAS+VLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  AKKLHEIDPLQKPKQDRYALRTSPQWLGP +EVIRF+TKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVNDFYNNGLPSNLS  RNPS
Sbjct:  224 LLTGRPNSKAHGPSGEVLNAKEAFNLAGINAEFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPS 459          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PAL1_ARATH (Phenylalanine ammonia-lyase 1 OS=Arabidopsis thaliana GN=PAL1 PE=1 SV=3)

HSP 1 Score: 416.387 bits (1069), Expect = 7.536e-116
Identity = 206/236 (87.29%), Postives = 223/236 (94.49%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +LTGRPNSKATGPNGE + A+EA K AG   GFF+LQPKEGLALVNGTAVGSG+ASMVLFE N L++L+EILSA+FAEVM GKPEFTDHLTH+LKHHPGQIEAAAIMEHILDGSSY+ +A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR+ATKSIEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL+  RNPS
Sbjct:  224 LLTGRPNSKATGPNGEALTAEEAFKLAGISSGFFDLQPKEGLALVNGTAVGSGMASMVLFETNVLSVLAEILSAVFAEVMSGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSSYMKLAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRYATKSIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLTASRNPS 459          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PAL1_PETCR (Phenylalanine ammonia-lyase 1 OS=Petroselinum crispum GN=PAL1 PE=1 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 9.842e-116
Identity = 208/236 (88.14%), Postives = 221/236 (93.64%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +LTGRPNSKA GP G I+  +EA K AG   GFFELQPKEGLALVNGTAVGSG+ASMVLFEAN LA+L+E++SAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR +TK IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS
Sbjct:  215 LLTGRPNSKAVGPTGVILSPEEAFKLAGVEGGFFELQPKEGLALVNGTAVGSGMASMVLFEANILAVLAEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 450          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PAL2_PHAVU (Phenylalanine ammonia-lyase class 2 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 1.285e-115
Identity = 207/236 (87.71%), Postives = 223/236 (94.49%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGFG--FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +LTGRPNSKA GP+GEI++A+EA + A  G  FFELQPKEGLALVNGTAVGSGLAS+VLFEAN LA+LSE++SAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY+  AKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRF+TKSIEREINSVNDNPLI VSRNKALHGGNFQGTPIGVSMDNTRLAIA+IGKLMFAQFS+LVND+YNNGLPSNL+  RNPS
Sbjct:  211 LLTGRPNSKAVGPSGEILNAKEAFELANIGSEFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLISVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSDLVNDYYNNGLPSNLTASRNPS 446          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 1.285e-115
Identity = 208/236 (88.14%), Postives = 222/236 (94.07%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGFG--FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +LTGRPNSKA GP+GE+++A+EA + A     FFELQPKEGLALVNGTAVGSGLASMVLFEAN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY+  AKKLHEIDPLQKPKQDRYALRTSPQWLGP IEVIRF+TKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVNDFYNNGLPSNL+  RNPS
Sbjct:  212 LLTGRPNSKAVGPSGEVLNAKEAFELASINSEFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPS 447          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PAL1_PRUAV (Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=PAL1 PE=2 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 1.285e-115
Identity = 210/236 (88.98%), Postives = 220/236 (93.22%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +LTGRPNSKA GP+G+ + A EA +  G   GFFELQPKEGLALVNGTAVGSGLAS VLF+ N LALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  AKKLHE DPLQKPKQDRYALRTSPQWLGPQIEVIR++TKSIEREI+SVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIA+IGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS
Sbjct:  216 MLTGRPNSKAVGPDGQTLSAAEAFEFVGINSGFFELQPKEGLALVNGTAVGSGLASTVLFDTNILALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEQDPLQKPKQDRYALRTSPQWLGPQIEVIRYSTKSIEREIDSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 451          
BLAST of CX291571 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 414.846 bits (1065), Expect = 2.193e-115
Identity = 207/236 (87.71%), Postives = 221/236 (93.64%), Query Frame = 1
Query:    4 VLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 705
            +LTGRPNSKA GP G I+  +EA K AG   GFFELQPKEGLALVNGTAVGSG+ASMVLFEAN LA+L+E++SAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR +TK IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIG+SMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS
Sbjct:  215 LLTGRPNSKAVGPTGVILSPEEAFKLAGVEGGFFELQPKEGLALVNGTAVGSGMASMVLFEANILAVLAEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGMSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPS 450          
The following BLAST results are available for this feature:
BLAST of CX291571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
PALY_STYHU6.816e-11788.98Phenylalanine ammonia-lyase OS=Stylosanthes humili... [more]
PAL2_PEA2.590e-11688.56Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PALY_POPTR3.383e-11688.14Phenylalanine ammonia-lyase OS=Populus trichocarpa... [more]
PALY_MEDSA4.418e-11688.56Phenylalanine ammonia-lyase OS=Medicago sativa PE=... [more]
PAL1_ARATH7.536e-11687.29Phenylalanine ammonia-lyase 1 OS=Arabidopsis thali... [more]
PAL1_PETCR9.842e-11688.14Phenylalanine ammonia-lyase 1 OS=Petroselinum cris... [more]
PAL2_PHAVU1.285e-11587.71Phenylalanine ammonia-lyase class 2 OS=Phaseolus v... [more]
PAL1_SOYBN1.285e-11588.14Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PAL1_PRUAV1.285e-11588.98Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=P... [more]
PAL2_PETCR2.193e-11587.71Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03010G06SK OF2 Citrus clementina cDNA clone C03010G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291571 ID=CX291571; Name=CX291571; organism=Citrus clementina; type=EST; length=705bp
GAGGTGCTCACCGGCCGGCCCAATTCTAAGGCCACCGGGCCTAATGGAGA
GATCATTGATGCCCAGGAAGCCTCTAAACAAGCGGGTTTCGGGTTCTTTG
AGTTGCAGCCTAAGGAGGGTCTTGCTCTTGTCAATGGCACTGCTGTTGGT
TCTGGCCTGGCTTCTATGGTTCTGTTTGAGGCTAACAACCTTGCTCTGTT
ATCAGAAATTTTGTCAGCTATTTTTGCTGAAGTCATGCAAGGCAAACCTG
AGTTCACCGATCACTTGACACACAAATTGAAGCACCATCCTGGCCAAATT
GAGGCTGCTGCTATAATGGAACATATCCTCGATGGCAGCTCTTATGTTAA
CGTGGCTAAGAAGTTGCATGAGATTGATCCTCTGCAGAAGCCGAAACAGG
ATCGTTATGCCCTGAGAACTTCACCACAATGGCTCGGCCCTCAGATCGAA
GTGATTCGGTTTGCAACCAAGTCTATTGAACGGGAGATCAACTCGGTGAA
TGACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATGGTGGCA
ATTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGTTTGGCT
ATTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACTTGTCAA
CGATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCAGGAATC
CTAGC
back to top