CX291575

Overview
NameCX291575
Unique NameCX291575
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length398
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX291575 vs. ExPASy Swiss-Prot
Match: Y8111_DICDI (DNA-binding protein DDB_G0278111 OS=Dictyostelium discoideum GN=DDB_G0278111 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.491e-11
Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 1 
Query:   79 MLSQILATEARERLARIALVKPEKGRGVEDIILRSAQMTQIVEKVSEERLISLLEXXXXXXXXXXXXXXXRRRSVLEDDD 318
            +L QIL  +ARERL+RI +VKPEK R +ED+I+R+AQ  Q+ E+V + +LISLLE                +R  +EDDD
Sbjct:   41 ILIQILTPDARERLSRITIVKPEKSRQIEDLIIRAAQTGQLTERVDDAKLISLLE---QLSEKTKKTTITMKRRTIEDDD 117
The following BLAST results are available for this feature:
BLAST of CX291575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y8111_DICDI1.491e-1146.25DNA-binding protein DDB_G0278111 OS=Dictyostelium ... [more]
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Properties
Property NameValue
Genbank descriptionC03010G10SK OF2 Citrus clementina cDNA clone C03010G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291575 ID=CX291575; Name=CX291575; organism=Citrus clementina; type=EST; length=398bp
GGAGCCTGCAAAATTCTCGAGCAGCATCAGAAAGCTCAGGAAGATGCCGA
GAGGGAGGCAGATGAACGGAGACAAACGATGCTTAGCCAGATTTTGGCAA
CCGAAGCACGTGAAAGACTTGCTCGAATTGCTTTGGTGAAACCCGAGAAG
GGTAGAGGTGTTGAGGACATTATATTGAGATCTGCCCAAATGACTCAGAT
AGTTGAGAAGGTTTCTGAAGAGAGGCTCATATCATTGCTGGAACAGATTA
ACACCCAAACCACCAAACAGACCAAAGTCACAATCCAAAGGCGCCGGAGT
GTTTTGGAAGATGATGATTAACCTTGTGTAATTTCTGGTCATCATGGTGT
GATACACAATGCTATTCATGGTTATTGAAATTATGATGTGCTTTTTCA
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