CX291589

Overview
NameCX291589
Unique NameCX291589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291589 vs. ExPASy Swiss-Prot
Match: TAL_ACIC1 (Transaldolase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=tal PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 3
Query:  414 IHVQLIFSLARYEEVIDAYLDGLEAS--GLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKG 701
            ++V LIFS+ RYE+VIDA+ DG+E +     DLSR+ SVASFFVSRVDT +DK LEKIG  EAL  +                  F+ PRW AL  KG
Sbjct:  161 VNVTLIFSVKRYEQVIDAFFDGVERAIEAGHDLSRLASVASFFVSRVDTEVDKRLEKIG-GEALQWKAKAAVANARLAYRTYEEKFATPRWQALAAKG 257          
BLAST of CX291589 vs. ExPASy Swiss-Prot
Match: TAL_THEFY (Transaldolase OS=Thermobifida fusca (strain YX) GN=tal PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15
Identity = 48/98 (48.98%), Postives = 58/98 (59.18%), Query Frame = 3
Query:  414 IHVQLIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKG 701
            ++V LIFSL RY  V+DA+L GLE +  +  DLS + SVASFFVSRVDT +DK L KI T EA+ LRG                 FS  RW AL + G
Sbjct:  161 VNVTLIFSLERYRAVMDAFLAGLEQAQQAGRDLSTIHSVASFFVSRVDTEVDKRLSKIATEEAVALRGKTALANARLAYAAYEEVFSSARWTALAQAG 258          
BLAST of CX291589 vs. ExPASy Swiss-Prot
Match: TAL1_STRAW (Transaldolase 1 OS=Streptomyces avermitilis GN=tal1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15
Identity = 49/99 (49.49%), Postives = 60/99 (60.61%), Query Frame = 3
Query:  414 IHVQLIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKG 701
            ++V LIFSL RY EV+DAYL GLE   A+G+ DL+ + SVASFFVSRVD+ IDK L K GT +A  L+G                 F+G RW AL   G
Sbjct:  167 VNVTLIFSLERYREVMDAYLAGLERAQAAGI-DLAGIHSVASFFVSRVDSEIDKRLAKAGTDDAQALKGKAALANARLAYEAYEEVFAGERWTALAPAG 264          
BLAST of CX291589 vs. ExPASy Swiss-Prot
Match: TAL_FRASC (Transaldolase OS=Frankia sp. (strain CcI3) GN=tal PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14
Identity = 48/99 (48.48%), Postives = 60/99 (60.61%), Query Frame = 3
Query:  414 IHVQLIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKG 701
            ++V LIF L RY+ VIDA++ GLE   A+G  D++ + SVASFFVSRVDT +D+ LEKIGT EA  LRG                 F+ PRW AL   G
Sbjct:  161 VNVTLIFGLDRYDAVIDAFMTGLEKALAAG-RDITDLASVASFFVSRVDTEVDQRLEKIGTSEAKALRGRAAVANARLAFERYEKAFATPRWAALAAAG 258          
BLAST of CX291589 vs. ExPASy Swiss-Prot
Match: TAL_MYCLE (Transaldolase OS=Mycobacterium leprae GN=tal PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 48/99 (48.48%), Postives = 61/99 (61.62%), Query Frame = 3
Query:  414 IHVQLIFSLARYEEVIDAYLDGLE--ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXF-SGPRWDALVKKG 701
            ++V LIFS+ R+ EVIDAYL G+E  A    DLS++ SVASFFVSRVDT IDK LEK+G+ +AL LRG                 F  G R+  L+ +G
Sbjct:  166 VNVTLIFSVQRHREVIDAYLAGIEKAAEAGRDLSKIVSVASFFVSRVDTEIDKRLEKLGSEQALALRGQAGVANARLAYAAYQKAFEGGQRYQTLMARG 264          
BLAST of CX291589 vs. ExPASy Swiss-Prot
Match: TAL_MYCLB (Transaldolase OS=Mycobacterium leprae (strain Br4923) GN=tal PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 48/99 (48.48%), Postives = 61/99 (61.62%), Query Frame = 3
Query:  414 IHVQLIFSLARYEEVIDAYLDGLE--ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXF-SGPRWDALVKKG 701
            ++V LIFS+ R+ EVIDAYL G+E  A    DLS++ SVASFFVSRVDT IDK LEK+G+ +AL LRG                 F  G R+  L+ +G
Sbjct:  166 VNVTLIFSVQRHREVIDAYLAGIEKAAEAGRDLSKIVSVASFFVSRVDTEIDKRLEKLGSEQALALRGQAGVANARLAYAAYQKAFEGGQRYQTLMARG 264          
BLAST of CX291589 vs. ExPASy Swiss-Prot
Match: TAL2_STRAW (Transaldolase 2 OS=Streptomyces avermitilis GN=tal2 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 50/97 (51.55%), Postives = 59/97 (60.82%), Query Frame = 3
Query:  414 IHVQLIFSLARYEEVIDAYLDGLEAS---GLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVK 695
            ++V LIFSL RY  V+DAYL GLE +   GL DLS++ SVASFFVSRVDT IDK ++ +GTPEA   RG                 FS  RW AL K
Sbjct:  161 VNVTLIFSLERYRMVMDAYLAGLEKAKERGL-DLSKIHSVASFFVSRVDTEIDKRIDALGTPEAKAARGKAGLANARLAYEAYEAVFSTDRWLALDK 256          
BLAST of CX291589 vs. ExPASy Swiss-Prot
Match: TAL_LEIXX (Transaldolase OS=Leifsonia xyli subsp. xyli GN=tal PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 52/99 (52.53%), Postives = 59/99 (59.60%), Query Frame = 3
Query:  414 IHVQLIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKG 701
            ++V LIFSL RY  VIDAYL GLE   A+G+ DLS + SVASFFVSRVDT IDK L  IGT EAL L+                  F+G R  ALV  G
Sbjct:  168 VNVTLIFSLERYRGVIDAYLTGLEKAKAAGI-DLSGIQSVASFFVSRVDTEIDKRLTAIGTGEALALKSKAGIANARLAYKVYEEAFAGDRAKALVAAG 265          
BLAST of CX291589 vs. ExPASy Swiss-Prot
Match: TAL1_STRCO (Transaldolase 1 OS=Streptomyces coelicolor GN=tal1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 49/95 (51.58%), Postives = 60/95 (63.16%), Query Frame = 3
Query:  414 IHVQLIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDAL 689
            ++V LIFSL RY EV+DAYL GLE   A+G+ DL+ + SVASFFVSRVD+ IDK L  +GT EAL LRG                 F+G R+ AL
Sbjct:  170 VNVTLIFSLERYREVMDAYLAGLEKAQAAGI-DLAGIHSVASFFVSRVDSEIDKRLSLLGTEEALGLRGRAALANARLAYEAYENVFAGDRFTAL 263          
BLAST of CX291589 vs. ExPASy Swiss-Prot
Match: TAL_FRASN (Transaldolase OS=Frankia sp. (strain EAN1pec) GN=tal PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.230e-14
Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = 3
Query:  414 IHVQLIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKG 701
            ++V LIF+L RYE V+DA++ GLE   A+G  D+S V SVASFFVSRVD+ +D  L KIGTP+A  LR                  FS PRW+ L   G
Sbjct:  161 VNVTLIFALDRYEAVMDAFMTGLEQALAAG-RDISDVASVASFFVSRVDSEVDGRLAKIGTPKAEALRSKAAIANARLAYELYEKIFSTPRWERLAAAG 258          
The following BLAST results are available for this feature:
BLAST of CX291589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
TAL_ACIC11.959e-1550.00Transaldolase OS=Acidothermus cellulolyticus (stra... [more]
TAL_THEFY5.699e-1548.98Transaldolase OS=Thermobifida fusca (strain YX) GN... [more]
TAL1_STRAW9.722e-1549.49Transaldolase 1 OS=Streptomyces avermitilis GN=tal... [more]
TAL_FRASC1.270e-1448.48Transaldolase OS=Frankia sp. (strain CcI3) GN=tal ... [more]
TAL_MYCLE1.658e-1448.48Transaldolase OS=Mycobacterium leprae GN=tal PE=3 ... [more]
TAL_MYCLB1.658e-1448.48Transaldolase OS=Mycobacterium leprae (strain Br49... [more]
TAL2_STRAW1.658e-1451.55Transaldolase 2 OS=Streptomyces avermitilis GN=tal... [more]
TAL_LEIXX2.829e-1452.53Transaldolase OS=Leifsonia xyli subsp. xyli GN=tal... [more]
TAL1_STRCO2.829e-1451.58Transaldolase 1 OS=Streptomyces coelicolor GN=tal1... [more]
TAL_FRASN8.230e-1447.47Transaldolase OS=Frankia sp. (strain EAN1pec) GN=t... [more]

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Properties
Property NameValue
Genbank descriptionC03011A07SK OF2 Citrus clementina cDNA clone C03011A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291589 ID=CX291589; Name=CX291589; organism=Citrus clementina; type=EST; length=704bp
AGTTCATTCTATGAATCCTTTCCCTTTCTTAGACCATGTTACCAAATAAT
GTGTAGAAGCCGACTTGACTTTAATTATTCGATGCTGGTGAGTTGGCTAT
TACCACGAGTAAGATTTTGATTGTGCAGACTATACACTATTGATGTTAGA
AGTTTATCTTATAGGATTTACAGTTCTTGGTCTTGGGGATTTTTGACTTT
TGTCTTTATGGACTTCTTGTCCCTCCTCTATGTACATTTCCTACATCTAA
TATACTTATTTTGTTTCTGAGCCAAAAAAAAGAAAAAAAAAAAGAAAAAG
AAAAAGAAAAAGACAGAGGATATAGGTTTTTGGCTTCTGAGACTCTTATG
TGTTTCTTCCATGTTAGATCAGAATTCCTCTGTTGTAGGCATCTGACATT
CAAATTGTGTTATATTCATGTACAGCTCATATTCTCCCTGGCTAGATATG
AAGAAGTCATTGATGCTTACTTGGATGGCCTTGAGGCTTCTGGGCTGAGT
GACCTTTCCAGAGTTACAAGTGTTGCATCCTTTTTCGTTAGTCGAGTAGA
CACCCTTATTGACAAAATGCTTGAAAAGATTGGTACCCCAGAAGCCCTAG
ATCTCCGAGGAAAGGCAGCAGTAGCTCAAGCAGCTCTAGCATACCAGCTG
TACCAGAAGAAGTTCTCTGGTCCAAGATGGGACGCTCTTGTGAAGAAAGG
GTGC
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