CX291650

Overview
NameCX291650
Unique NameCX291650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.381e-61
Identity = 119/147 (80.95%), Postives = 129/147 (87.76%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MKKSQWQ+VIDLNLTGVFLCTQ           GRIINIASVVGLVGN GQANYSAAKAGVIG TKTVA+EYASRNINVNA+APGFI+SDMT+KLG+D+ KKILE IPLGRYGQPEEVAGLVEFLA+NPA+ Y+TGQV TIDGGM M
Sbjct:  174 MKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMTSKLGDDINKKILETIPLGRYGQPEEVAGLVEFLAINPASSYVTGQVFTIDGGMTM 320          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.647e-57
Identity = 113/147 (76.87%), Postives = 124/147 (84.35%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MKKSQW +VIDLNLTGVFLCTQ           GRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+PAA YITGQ  TIDGG+ +
Sbjct:  169 MKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 315          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.647e-57
Identity = 113/147 (76.87%), Postives = 124/147 (84.35%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MKKSQW +VIDLNLTGVFLCTQ           GRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+PAA YITGQ  TIDGG+ +
Sbjct:  182 MKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 328          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.647e-57
Identity = 113/147 (76.87%), Postives = 124/147 (84.35%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MKKSQW +VIDLNLTGVFLCTQ           GRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+PAA YITGQ  TIDGG+ +
Sbjct:  174 MKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 320          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.012e-56
Identity = 111/147 (75.51%), Postives = 124/147 (84.35%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MKKSQW +V+DLNLTGVFLC+Q           GRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+PAA YITGQ  TIDGG+ +
Sbjct:  108 MKKSQWDEVMDLNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTIDGGIAI 254          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.819e-54
Identity = 109/147 (74.15%), Postives = 120/147 (81.63%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MKKSQW +VIDLNLTGVFLCTQ           GRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + PGFIASDMTAKLGED+EKKIL  IPLGRYGQPE VAGLVEFLAL+PA+ YITG   +I GG  +
Sbjct:  171 MKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRYGQPEYVAGLVEFLALSPASSYITGHTFSIHGGFAI 317          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.184e-52
Identity = 106/147 (72.11%), Postives = 120/147 (81.63%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK+SQW +VI LNLTGVFLCTQ           GRIINI+SVVGL+GNIGQANY+AAK GVI  +KT A+E ASRNINVN + PGFIASDMTA+LGED+EKKIL  IPLGRYG+ EEVAGLVEFLAL+PAA YITGQ  TIDGG+ +
Sbjct:  173 MKQSQWDEVIALNLTGVFLCTQAAVKIMMKKKRGRIINISSVVGLIGNIGQANYAAAKGGVISFSKTAAREGASRNINVNVVCPGFIASDMTAELGEDMEKKILGTIPLGRYGKAEEVAGLVEFLALSPAASYITGQAFTIDGGIAI 319          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG6_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase (Fragments) OS=Brassica napus PE=1 SV=3)

HSP 1 Score: 200.675 bits (509), Expect = 6.499e-51
Identity = 104/139 (74.82%), Postives = 116/139 (83.45%), Query Frame = -3
Query:  300 VIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 683
            VI LNLTGVFLC+Q           GRIINIASVVGL+GNIGQANY+AAKAGVIG +KT A+E ASRNINVN + PGFIAS+MTAKLGED+EKKIL  IPLGRYGQPE+VAGLVEFLAL+PAA YITGQ  TIDGG+ +
Sbjct:   63 VIALNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASEMTAKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTIDGGIAI 201          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG1_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Synechocystis sp. (strain PCC 6803) GN=fabG1 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.402e-45
Identity = 97/147 (65.99%), Postives = 108/147 (73.47%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK   WQ VIDLNLTGVFLCT+           GRIINI SV G++GN GQANYSAAKAGVIG TKTVAKE ASR + VNA+APGFIA+DMT  L  +    IL+ IPL RYGQPEEVAG + FLA +PAA YITGQ   +DGGMVM
Sbjct:  103 MKLEDWQAVIDLNLTGVFLCTKAVSKLMLKQKSGRIINITSVAGMMGNPGQANYSAAKAGVIGFTKTVAKELASRGVTVNAVAPGFIATDMTENLNAE---PILQFIPLARYGQPEEVAGTIRFLATDPAAAYITGQTFNVDGGMVM 246          
BLAST of CX291650 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 4.668e-41
Identity = 87/147 (59.18%), Postives = 113/147 (76.87%), Query Frame = -3
Query:  300 MKKSQWQDVIDLNLTGVFLCTQ-----------GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGMVM 707
            MK+ +W DVI++NL GVF CT+           GRIIN++S+VG+ GN GQANY AAKAGVIGLTK+ AKE ASRNI VNAIAPGFI++DMT KL +D++ ++L++IPL R+G+P +V+ +V FLA +  A Y+TGQ L IDGGMVM
Sbjct:  101 MKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKDVQDEMLKQIPLARFGEPSDVSSVVTFLA-SEGARYMTGQTLHIDGGMVM 246          
The following BLAST results are available for this feature:
BLAST of CX291650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
FABG_CUPLA2.381e-6180.953-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
FABG3_BRANA4.647e-5776.873-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG2_BRANA4.647e-5776.873-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
FABG1_BRANA4.647e-5776.873-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
FABG4_BRANA3.012e-5675.513-oxoacyl-[acyl-carrier-protein] reductase 4 (Frag... [more]
FABG5_BRANA2.819e-5474.153-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
FABG_ARATH1.184e-5272.113-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
FABG6_BRANA6.499e-5174.823-oxoacyl-[acyl-carrier-protein] reductase (Fragme... [more]
FABG1_SYNY31.402e-4565.993-oxoacyl-[acyl-carrier-protein] reductase 1 OS=Sy... [more]
FABG_BACSU4.668e-4159.183-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionC03011F11SK OF2 Citrus clementina cDNA clone C03011F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291650 ID=CX291650; Name=CX291650; organism=Citrus clementina; type=EST; length=709bp
TTTTTTTTTTTGAAAGCAATTTGAAGACAACATATAGCAGAGTATGTATC
ACCCAAAAACTACATTCCATAATGCCAATTTGAAGTACAACAAATGTTAC
GCGCCTCATGTTTGGTTTTTGCAACATGCTTAGCTTAAATTCTACCAAAA
CTTACCTGAATTTTTATTTCATAACAACACTTTGGCAACATTTCCTCATA
GGATCATAAAGCAGACAAAGTTTCAACCCAGTCGATCTTACATATGAGAG
CTACAGGTCAGAACTGAAACTAAACCAGGCAGAATGGGTCACTGACCTAC
ATAACCATTCCTCCGTCAATAGTAAGCACCTGTCCAGTAATGTAACCGGC
AGCGGGATTGAGGGCCAAGAATTCCACCAGTCCAGCAACTTCTTCAGGTT
GGCCATACCTTCCTAAGGGGATTTTCTCCAAGATCTTCTTTTCTAGGTCT
TCGCCAAGCTTGGCGGTCATATCAGACGCGATGAATCCTGGTGCAATAGC
ATTGACATTAATGTTTCTGCTTGCATATTCCTTTGCAACAGTTTTTGTCA
GGCCAATAACACCTGCTTTTGCAGCACTGTAATTGGCTTGGCCAATATTT
CCAACCAGACCAACAACTGATGCTATATTGATTATTCTTCCCTGTGTACA
CAGGAATACACCTGTAAGATTCAGATCGATAACGTCCTGCCATTGTGACT
TCTTCATTC
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