CX291707
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291707 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 7.700e-48 Identity = 83/124 (66.94%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 37 RTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWHYWLSPEAW 408 RTV+YRE+AAGM+SA+ YA+ QVAVEI+Y T QT +Y LILYSMIG+ W + KFF F+Y+M FV FTLYGMM+VALTP Q+A I LSFFL+ WNLF+GF+IPR +IP+WWRW+YW SP AW Sbjct: 1258 RTVFYREKAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGYDWTVVKFFWFYYYMLTCFVYFTLYGMMLVALTPNYQIAGICLSFFLSFWNLFSGFLIPRPQIPIWWRWYYWASPVAW 1381
BLAST of CX291707 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 3.822e-47 Identity = 80/124 (64.52%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 37 RTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWHYWLSPEAW 408 RTV+YRE+AAGM+SA+ YA+ QVAVEI+Y T QT +Y LILYSMIG W + KF F+Y+M SF+ FTLYGMM++ALTP Q+A I +SFFL+LWNLF+GF+IPR +IP+WWRW+YW +P AW Sbjct: 1259 RTVFYREKAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGCNWTMAKFLWFYYYMLTSFIYFTLYGMMLMALTPNYQIAGICMSFFLSLWNLFSGFLIPRPQIPIWWRWYYWATPVAW 1382
BLAST of CX291707 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 8.514e-47 Identity = 80/124 (64.52%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 37 RTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWHYWLSPEAW 408 RTV+YRERAAGM+S L YA QVA+E IYV QT +Y L+L+SMIG++W KFF F+YF++ F F++YGMM+VALTPG Q+A IV+SFFL+ WNLF+GF+IPR IPVWWRW+YW SP AW Sbjct: 1265 RTVFYRERAAGMYSELPYAFAQVAIETIYVAIQTFVYSLLLFSMIGYQWTAVKFFYFYYFIFMCFTYFSMYGMMVVALTPGYQIAAIVMSFFLSFWNLFSGFLIPRPLIPVWWRWYYWASPVAW 1388
BLAST of CX291707 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.151e-43 Identity = 73/124 (58.87%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 37 RTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWHYWLSPEAW 408 RTV+YRERAAGM+SA+ YA GQV++EI Y+ Q+V Y +I+Y+MIGF+W++GKFF + + M+ + + FT YGMM VA+TP Q VA+IV +FF +WNLF+GF+IPR +PVWWRW+YW +P AW Sbjct: 1243 RTVFYRERAAGMYSAIPYAFGQVSIEIPYIFVQSVFYGIIVYAMIGFEWDVGKFFWYLFIMFFTLLYFTFYGMMGVAVTPNQNVASIVAAFFYGVWNLFSGFIIPRPRMPVWWRWYYWANPVAW 1366
BLAST of CX291707 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.834e-42 Identity = 72/124 (58.06%), Postives = 94/124 (75.81%), Query Frame = 1 Query: 37 RTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWHYWLSPEAW 408 RTV+YRERAAGM+SA YA GQVA+E Y Q+++Y +I+YSMIGFKW KFF + +FM+ +F+ FT YGMM V LTP VA+IV S F +WNLF+GF+IPR ++P+WWRW+ W+ P AW Sbjct: 1273 RTVFYRERAAGMYSAFPYAFGQVAIEFPYTLVQSIIYGIIVYSMIGFKWTAAKFFWYLFFMFFTFLYFTFYGMMAVGLTPSYHVASIVSSAFYGIWNLFSGFIIPRPKVPIWWRWYCWICPVAW 1396
BLAST of CX291707 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 4.834e-42 Identity = 72/124 (58.06%), Postives = 95/124 (76.61%), Query Frame = 1 Query: 37 RTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWHYWLSPEAW 408 RTV+YRE+AAGM+SA+ YA QV +EI Y+ Q +Y LI+YSMIGF+W + KFF F+FM+ +F+ FT +GMM VA+TP Q VA+IV FF +WNLF+GF++PR IP+WWRW+YW P AW Sbjct: 1244 RTVFYREKAAGMYSAIPYAFAQVLIEIPYIFVQATVYGLIVYSMIGFEWTVAKFFWDFFFMFFTFLYFTFFGMMTVAVTPNQNVASIVAGFFYTVWNLFSGFIVPRPRIPIWWRWYYWGCPIAW 1367
BLAST of CX291707 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 6.314e-42 Identity = 71/124 (57.26%), Postives = 94/124 (75.81%), Query Frame = 1 Query: 37 RTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWHYWLSPEAW 408 RTV+YRE+AAGM+SA+ YA QV +EI YV Q ++Y LI+Y+MIGF+W KFF + +FM+ SF+ FT YGMM VA+TP +A++V S F +WNLF+GF+IPR +PVWW W+YWL P AW Sbjct: 1231 RTVFYREQAAGMYSAMPYAFAQVFIEIPYVLVQAIVYGLIVYAMIGFEWTAVKFFWYLFFMYGSFLTFTFYGMMAVAMTPNHHIASVVSSAFYGIWNLFSGFLIPRPSMPVWWEWYYWLCPVAW 1354
BLAST of CX291707 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 4.092e-41 Identity = 69/124 (55.65%), Postives = 93/124 (75.00%), Query Frame = 1 Query: 37 RTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWHYWLSPEAW 408 RTV+YRE+AAGM+SAL YA QV +E+ ++ QT++Y L++YSMIGF W KF + +FM+ +F+ FT YGMM VA+TP +A IV + F A+WN+FAGF+IPR IP+WWRW+YW P AW Sbjct: 1249 RTVFYREKAAGMYSALPYAYAQVLIEVPHILVQTLLYGLLVYSMIGFDWTAAKFLWYMFFMFFTFLYFTYYGMMAVAMTPNSDIAAIVAAAFYAIWNIFAGFIIPRPRIPIWWRWYYWACPVAW 1372
BLAST of CX291707 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 6.981e-41 Identity = 68/124 (54.84%), Postives = 95/124 (76.61%), Query Frame = 1 Query: 37 RTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWHYWLSPEAW 408 RTV+YRERAAGM+SA YA GQVA+E+ Y+ QT++Y +++YSMIGF+W + KF + +FM+ + + FT YGMM V LTP + +A I+ S F +WNLF+G++IPR +IPVWWRW+ W+ P AW Sbjct: 1258 RTVFYRERAAGMYSAFPYAFGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLTPNESIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAW 1381
BLAST of CX291707 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 6.981e-41 Identity = 73/124 (58.87%), Postives = 92/124 (74.19%), Query Frame = 1 Query: 37 RTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTLYGMMIVALTPGQQVATIVLSFFLALWNLFAGFMIPREEIPVWWRWHYWLSPEAW 408 RTV+YRERAAGM+SAL YA GQVA+E Y Q+V+Y +I+YSMIGF+W + KFF + +FM+ + + FT YGMM V LTP VA+IV S F A+WNLF GF+I R PVWWRW+ W+ P AW Sbjct: 1277 RTVFYRERAAGMYSALPYAFGQVAIEFPYTLVQSVIYSIIVYSMIGFQWTVAKFFWYLFFMFFTLLYFTFYGMMAVGLTPSYHVASIVSSAFYAIWNLFTGFVISRPATPVWWRWYCWICPVAW 1400 The following BLAST results are available for this feature:
BLAST of CX291707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291707 ID=CX291707; Name=CX291707; organism=Citrus clementina; type=EST; length=408bpback to top |