CX291725

Overview
NameCX291725
Unique NameCX291725
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length472
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9901 contig Ccv1_Contig9901:228..699. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291725 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.025e-15
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 2
Query:   11 AKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 160
            A+QQVVSGTLY ITLEA +GGQKK++EAKVWEKPW+ FKEL+EF  V  +
Sbjct:   46 AQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFKHVGDA 95          
BLAST of CX291725 vs. ExPASy Swiss-Prot
Match: CYT12_ORYSJ (Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.855e-13
Identity = 32/55 (58.18%), Postives = 44/55 (80.00%), Query Frame = 2
Query:    8 EAKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSST 172
            EAK+QVV+GTL+ +TLEA+E G+KK++EAKVW KPW+ FKEL+EF     + + T
Sbjct:   89 EAKEQVVAGTLHHLTLEALEAGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFT 143          
BLAST of CX291725 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 5.034e-13
Identity = 32/56 (57.14%), Postives = 45/56 (80.36%), Query Frame = 2
Query:    8 EAKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 175
            +AK+QVV+GTL+ +TLE +E GQKKL+EAKVW KPW+ FKEL+EF   + + + T+
Sbjct:   78 KAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITS 133          
BLAST of CX291725 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 8.587e-13
Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = 2
Query:   14 KQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 160
            KQQVV+GTLY  T+E  EG  KKL+EAKVWEKPWM FKEL+EF  V  S
Sbjct:   89 KQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDAS 137          
BLAST of CX291725 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 5.566e-12
Identity = 29/51 (56.86%), Postives = 40/51 (78.43%), Query Frame = 2
Query:    8 EAKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 160
            +A +QVV+G LY +TLE +E G+KK++EAKVW KPWM FK+L+EF  +  S
Sbjct:   87 KATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPS 137          
BLAST of CX291725 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11
Identity = 30/45 (66.67%), Postives = 38/45 (84.44%), Query Frame = 2
Query:    8 EAKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEF 142
            +A++QVV+GT+Y +TLEA EG Q K FEAKVW KPWM FK+L+EF
Sbjct:   76 KAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEF 120          
BLAST of CX291725 vs. ExPASy Swiss-Prot
Match: CYT3_ORYSJ (Cysteine proteinase inhibitor 3 OS=Oryza sativa subsp. japonica GN=Os05g0409300 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.115e-11
Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 2
Query:    8 EAKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 175
            +AK+QVV+GTL+D+ LE V+ G+K L+ AKVW KPW+ FK + EF  V  S S +A
Sbjct:   86 KAKRQVVTGTLHDLMLEVVDSGKKSLYSAKVWVKPWLDFKAVVEFRHVGDSQSQSA 141          
BLAST of CX291725 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.762e-11
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 2
Query:    8 EAKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSS 169
            +AK QVV+GT+Y +T+E  +G  KKL+EAKVWEKPW  FK+L+EF  V +  S+
Sbjct:   82 KAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEGASA 135          
The following BLAST results are available for this feature:
BLAST of CX291725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
CYTI_VIGUN7.025e-1572.00Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]
CYT12_ORYSJ3.855e-1358.18Cysteine proteinase inhibitor 12 OS=Oryza sativa s... [more]
CYT6_ARATH5.034e-1357.14Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYT1_ORYSJ8.587e-1369.39Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT7_ARATH5.566e-1256.86Cysteine proteinase inhibitor 7 OS=Arabidopsis tha... [more]
CYT3_ARATH1.619e-1166.67Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT3_ORYSJ2.115e-1153.57Cysteine proteinase inhibitor 3 OS=Oryza sativa su... [more]
CYT1_MAIZE2.762e-1155.56Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC04002G08SK FlavFr1 Citrus clementina cDNA clone C04002G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291725 ID=CX291725; Name=CX291725; organism=Citrus clementina; type=EST; length=472bp
TCGGCACGAGGCGAAGCAGCAAGTGGTTTCAGGGACTCTGTACGACATCA
CCTTGGAGGCTGTTGAAGGAGGTCAGAAGAAACTTTTTGAAGCTAAGGTC
TGGGAGAAGCCTTGGATGCAATTCAAGGAGTTGAAAGAATTCAATACTGT
GGCTCAGTCTCACTCCTCAACCGCTTAGCTTGTGGTGACTGAAGATGACA
TCTACGTGTAGCTTGCAATGGATCAAACAAAGAGACAGTATCAATAAGAA
TGGAGCTATAACCATGTTCAGAATATAAAAATAAATGTAACCGGATTTAT
GAGTTTGGTTCTTTAATCTTTTGCAAGTTATGTGTCGATTATTTATGGTA
GTAGCTGCAACTCAGCGCAACTTTTATAACTGTGTGAAAAATAATTGAAA
TGACCTTTGGTCTGTAATATATATACAAGATTAATCTCTTTCTACTTAAA
ACCTCGTGCGGGGGGGCCCGGT
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