CX291735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291735 vs. ExPASy Swiss-Prot
Match: RAD17_ARATH (Cell cycle checkpoint protein RAD17 OS=Arabidopsis thaliana GN=RAD17 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.887e-38 Identity = 73/130 (56.15%), Postives = 97/130 (74.62%), Query Frame = 1 Query: 157 LWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLEYTSKLDEFENFVERIRRYGSTSLSIPGESKSSAILLID 546 LW +KY+PR+LEEL+V +KKV+EV+ WF+E L K+ NVL++TGQAGVGK+AT+ I S LG ++EW+ P PTIWQE++HN +GL+YTSKLDEFENFVE R+YG + S K+ +LLID Sbjct: 92 LWVDKYRPRTLEELSVHKKKVDEVKLWFQESLDFLKNGLRNNVLLVTGQAGVGKSATIHLITSILGVTVHEWNAPIPTIWQEHVHNTSSGLKYTSKLDEFENFVESTRKYGVMASSSTDGIKAPVVLLID 221
BLAST of CX291735 vs. ExPASy Swiss-Prot
Match: RAD17_MOUSE (Cell cycle checkpoint protein RAD17 OS=Mus musculus GN=Rad17 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 6.919e-16 Identity = 53/182 (29.12%), Postives = 91/182 (50.00%), Query Frame = 1 Query: 22 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASTSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQEYMHNCKTGLE-------YTSKLDEFENFVERIRRYGSTSLSIPGESKSSAILLID 546 K P +LE + + GR L+ + GL +++ S + W +KYKP + ELAV +KK+EEV W + ++ + K K +VL+ITG G GKT T++ ++ LG ++ EW P +Q+ + LE Y S++ F +F+ R +Y + + I+L++ Sbjct: 50 KYLPSTLESNRLSARKRGR-LSLEQTHGL-----ETSRERLSDNEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLEVKPKQGGSVLLITGPPGCGKTTTIKILSKELGIQVQEWVNPILPDFQKDDYKELLSLESNFSVVPYQSQIAVFNDFLLRATKYSKLQMLGDDLTTDKKIILVE 225
BLAST of CX291735 vs. ExPASy Swiss-Prot
Match: RAD17_PONAB (Cell cycle checkpoint protein RAD17 OS=Pongo abelii GN=RAD17 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.858e-15 Identity = 50/182 (27.47%), Postives = 86/182 (47.25%), Query Frame = 1 Query: 22 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASTSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSLSIPGESKSSAILLID 546 KN P +LE G + + GL N + S + W +KYKP + ELAV +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P +Q + M N ++ Y S++ F+ F+ R +Y + I+L++ Sbjct: 50 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTIKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVE 226
BLAST of CX291735 vs. ExPASy Swiss-Prot
Match: RAD17_HUMAN (Cell cycle checkpoint protein RAD17 OS=Homo sapiens GN=RAD17 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 9.991e-15 Identity = 50/182 (27.47%), Postives = 86/182 (47.25%), Query Frame = 1 Query: 22 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASTSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQ----EYMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSLSIPGESKSSAILLID 546 KN P +LE G + + GL N + S + W +KYKP + ELAV +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P +Q + M N ++ Y S++ F+ F+ R +Y + I+L++ Sbjct: 50 KNGPSTLESSRFPARKRGNLSSLEQIYGLEN-----SKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVE 226
BLAST of CX291735 vs. ExPASy Swiss-Prot
Match: RAD17_CERAE (Cell cycle checkpoint protein RAD17 OS=Cercopithecus aethiops GN=RAD17 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14 Identity = 49/182 (26.92%), Postives = 86/182 (47.25%), Query Frame = 1 Query: 22 KNKPCSLEEHAIQKENVGRFLTPSRFEGLVNPDHDSASASTSTQQLWAEKYKPRSLEELAVQRKKVEEVRAWFEERLGDSKDKFSTNVLVITGQAGVGKTATVRQIASHLGARLYEWDTPTPTIWQE----YMHNCKTGLE---YTSKLDEFENFVERIRRYGSTSLSIPGESKSSAILLID 546 KN P +LE G + + L N + S S + W +KYKP + ELAV +KK+EEV W + ++ + + K ++L+ITG G GKT T++ ++ G ++ EW P +Q+ + N ++ Y S++ F+ F+ R +Y + I+L++ Sbjct: 39 KNGPSTLESSKFPVRKRGNLSSLEQIYSLEN-----SKESLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTTTIKVLSKEHGIQVQEWINPVLPDFQKDDFREIFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVE 215 The following BLAST results are available for this feature:
BLAST of CX291735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291735 ID=CX291735; Name=CX291735; organism=Citrus clementina; type=EST; length=548bpback to top |