CX291772

Overview
NameCX291772
Unique NameCX291772
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length556
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig504 contig Ccv1_Contig504:478..1033. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A1C_TOBAC (1-aminocyclopropane-1-carboxylate synthase OS=Nicotiana tabacum GN=ACS1 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 3.519e-71
Identity = 132/190 (69.47%), Postives = 155/190 (81.58%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQDKESEKPT------KKRWQQ-NLRVSFSSRI 556
            KDMGLPGFRVGIVYSFND VVNC RKMSSFGLVS+QTQYLLA MLSD+ FV NFL E+SKRLAKRH +FT GLE+VGI CL+SNAGLF WMDLR LLKE T + E++LWR I+NDVKLNVSPGSSF C EPG+FRVC ANMDD+T+ +AL RI +FV   K  ++ T      K++W++ NLR+SFS R+
Sbjct:  278 KDMGLPGFRVGIVYSFNDAVVNCARKMSSFGLVSTQTQYLLAEMLSDERFVSNFLTESSKRLAKRHKHFTNGLEEVGIKCLRSNAGLFCWMDLRPLLKESTFDSEMSLWRVIINDVKLNVSPGSSFDCQEPGFFRVCFANMDDETVDIALARIRSFVGVKKSGDESTPILMEKKQQWKKNNLRLSFSKRM 467          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A1C_SOYBN (1-aminocyclopropane-1-carboxylate synthase OS=Glycine max GN=ACS1 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 2.979e-70
Identity = 127/183 (69.40%), Postives = 151/183 (82.51%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQDKESEKPTKKR-WQQNLRVSFSSR 553
            KDMG PGFRVGI+YS+ND VV+C RKMSSFGLVS+QTQYLLASML+DDEFV++FLVE++KRLA+RH  FT GL +VGI CL+SNAGLF WMDLR LLK+ TL+ E+ LWR I+++VK+NVSPGSSF CTEPGWFRVC ANMDD  +Q+AL RI  FV Q+KE   P KK  W  NLR+S  +R
Sbjct:  279 KDMGFPGFRVGIIYSYNDAVVHCARKMSSFGLVSTQTQYLLASMLNDDEFVESFLVESAKRLAQRHRVFTGGLAKVGIKCLQSNAGLFVWMDLRQLLKKPTLDSEMELWRVIIDEVKINVSPGSSFHCTEPGWFRVCYANMDDMAVQIALQRIRNFVLQNKEIMVPNKKHCWHSNLRLSLKTR 461          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A12_SOLLC (1-aminocyclopropane-1-carboxylate synthase 2 OS=Solanum lycopersicum GN=ACS2 PE=1 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 3.891e-70
Identity = 129/188 (68.62%), Postives = 152/188 (80.85%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFV----QQDKESEKPTKKRWQQ-NLRVSFSSRI 556
            KDMGLPGFRVGI+YSFND VVNC RKMSSFGLVS+QTQY LA+MLSD++FVDNFL E++ RL KRH +FT GLE VGI CLK+NAGLF WMDLR LL+E T + E++LWR I+NDVKLNVSPGSSF+C EPGWFRVC ANMDD T+ +AL RI  FV      DK S    K++W++ NLR+SFS R+
Sbjct:  278 KDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVEKSGDKSSSMEKKQQWKKNNLRLSFSKRM 465          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A11_PRUMU (1-aminocyclopropane-1-carboxylate synthase 1 OS=Prunus mume GN=ACS1 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 6.638e-70
Identity = 130/186 (69.89%), Postives = 152/186 (81.72%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQDKESEK-----PTKKRWQQNLRVSFSS 550
            KDMGLPG RVGIVYS+ND VVN GRKMSSFGLVSSQTQ++L SML D+EFV  FL  + KRLAKRH  FTKGLE+VGINCLKSNAGLF WMDLR LL+++T +GE+ LWR IVN+V  NVSPGSSF+C EPGWFRVC ANMDD+TL+VAL RI  FV+Q K+++       + KRW+ NLR+SFSS
Sbjct:  277 KDMGLPGLRVGIVYSYNDDVVNIGRKMSSFGLVSSQTQHMLPSMLLDEEFVARFLETSPKRLAKRHGVFTKGLEEVGINCLKSNAGLFCWMDLRRLLEDQTFDGEMVLWRVIVNEVGPNVSPGSSFKCVEPGWFRVCFANMDDETLEVALKRIRTFVRQGKKAQDQVVQVKSPKRWKSNLRLSFSS 462          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A11_ARATH (1-aminocyclopropane-1-carboxylate synthase-like protein 1 OS=Arabidopsis thaliana GN=ACS1 PE=2 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 4.302e-69
Identity = 126/194 (64.95%), Postives = 154/194 (79.38%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQDK-------------ESEKPTKKRWQQNLRVSFSS 550
            KDMGLPGFRVG+VYS+ND VV+C R+MSSFGLVSSQTQ  LA+MLSD  FVDNFLVE SKR+AKRHH FT+GLE++GI+CL+SNAGLF  MDLRH+LK++T + E+ALWR I+N VK+NVSPGSSF C+EPGWFRVC ANMD+DTLQ+AL RI  FV  D+             + E   +K +Q+NL++S SS
Sbjct:  273 KDMGLPGFRVGVVYSYNDVVVSCARRMSSFGLVSSQTQSFLAAMLSDQSFVDNFLVEVSKRVAKRHHMFTEGLEEMGISCLRSNAGLFVLMDLRHMLKDQTFDSEMALWRVIINKVKINVSPGSSFHCSEPGWFRVCFANMDEDTLQIALERIKDFVVGDRANKNKNCNCICNNKRENKKRKSFQKNLKLSLSS 466          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A11_CUCMA (1-aminocyclopropane-1-carboxylate synthase CMW33 OS=Cucurbita maxima GN=ACS1 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.210e-65
Identity = 123/186 (66.13%), Postives = 150/186 (80.65%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQ-----QDKESEKPTKKRWQQN-LRVSFS 547
            KDMGLPGFRVGI+YS+ND VV   R+MSSFGLVSSQTQ+LLA+MLSD++FVD FL E SKRLA+RH  FTK L+++GI CL SNAG+F WMDLR LLK++T + E+ LWR I+N+VKLNVSPGSSF  TEPGWFRVC ANMDD+T+ VALNRI +FV+     +D     P+K R ++N LR+SFS
Sbjct:  279 KDMGLPGFRVGIIYSYNDVVVRRARQMSSFGLVSSQTQHLLAAMLSDEDFVDKFLAENSKRLAERHARFTKELDKMGITCLNSNAGVFVWMDLRRLLKDQTFKAEMELWRVIINEVKLNVSPGSSFHVTEPGWFRVCFANMDDNTVDVALNRIHSFVENIDKKEDNTVAMPSKTRRRENKLRLSFS 464          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A12_CUCPE (1-aminocyclopropane-1-carboxylate synthase 2 OS=Cucurbita pepo GN=ACS2 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 8.396e-65
Identity = 122/186 (65.59%), Postives = 148/186 (79.57%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQ-----QDKESEKPTKKRWQQN-LRVSFS 547
            KDMGLPGFRVGI+YS+ND VV   R+MSSFGLVSSQTQ+LLA+MLSD++FVD FL E SKRL +RH  FTK L+++GI CL SNAG+F WMDLR LLK++T + E+ LWR I+N+VKLNVSPGSSF  TEPGWFRVC ANMDD+T+ VALNRI +FV+     +D     P+K R + N LR+SFS
Sbjct:  279 KDMGLPGFRVGIIYSYNDVVVRRARQMSSFGLVSSQTQHLLAAMLSDEDFVDKFLAENSKRLGERHARFTKELDKMGITCLNSNAGVFVWMDLRRLLKDQTFKAEMELWRVIINEVKLNVSPGSSFHVTEPGWFRVCFANMDDNTVDVALNRIHSFVENIDKKEDNTVAMPSKTRHRDNKLRLSFS 464          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A12_ARATH (1-aminocyclopropane-1-carboxylate synthase 2 OS=Arabidopsis thaliana GN=ACS2 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 8.396e-65
Identity = 125/195 (64.10%), Postives = 150/195 (76.92%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEK-TLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQQDK--------------ESEKPTKKRW-QQNLRVSF 544
            KDMGLPGFRVGIVYSFND+VV+C RKMSSFGLVSSQTQ +LASMLSDD+FVDNFL+E+S+RL  RH  FT G+++  I CL SNAGLF WMDLRHLL+++ + E EI LW  I++ VKLNVSPGSSF+CTEPGWFR+C ANMDDDTL VAL RI  FV ++K              +++   K +W Q NLR+SF
Sbjct:  279 KDMGLPGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDRVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKSAKKLKWTQTNLRLSF 473          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A11_CUCPE (1-aminocyclopropane-1-carboxylate synthase 1 OS=Cucurbita pepo GN=ACC1A PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 1.871e-64
Identity = 121/186 (65.05%), Postives = 148/186 (79.57%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFVQ-----QDKESEKPTKKRWQQN-LRVSFS 547
            KDMGLPGFRVGI+YS+ND VV   R+MSSFGLVSSQTQ+LLA+MLSD++FVD FL E SKR+ +RH  FTK L+++GI CL SNAG+F WMDLR LLK++T + E+ LWR I+N+VKLNVSPGSSF  TEPGWFRVC ANMDD+T+ VALNRI +FV+     +D     P+K R + N LR+SFS
Sbjct:  279 KDMGLPGFRVGIIYSYNDVVVRRARQMSSFGLVSSQTQHLLAAMLSDEDFVDKFLAENSKRVGERHARFTKELDKMGITCLNSNAGVFVWMDLRRLLKDQTFKAEMELWRVIINEVKLNVSPGSSFHVTEPGWFRVCFANMDDNTVDVALNRIHSFVENIDKKEDNTVAMPSKTRHRDNKLRLSFS 464          
BLAST of CX291772 vs. ExPASy Swiss-Prot
Match: 1A14_SOLLC (1-aminocyclopropane-1-carboxylate synthase 4 OS=Solanum lycopersicum GN=ACS4 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.341e-62
Identity = 109/157 (69.43%), Postives = 136/157 (86.62%), Query Frame = 2
Query:    8 KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCIANMDDDTLQVALNRIAAFV 478
            KD+G PGFRVGIVYSFND VVNC RKMSSFGLVS+QTQ+LLA MLSDDEFV+ FL+E++KRL +R+  FT+GLE++GI CL+SNAG++ WMDLR LLKE TL+ E++LW+ I+N+VKLNVSPGSSF C+E GWFRVC AN+DD T+++AL RI  F+
Sbjct:  282 KDLGFPGFRVGIVYSFNDDVVNCARKMSSFGLVSTQTQHLLAFMLSDDEFVEEFLIESAKRLRERYEKFTRGLEEIGIKCLESNAGVYCWMDLRSLLKEATLDAEMSLWKLIINEVKLNVSPGSSFNCSEVGWFRVCFANIDDQTMEIALARIRMFM 438          
The following BLAST results are available for this feature:
BLAST of CX291772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
1A1C_TOBAC3.519e-7169.471-aminocyclopropane-1-carboxylate synthase OS=Nico... [more]
1A1C_SOYBN2.979e-7069.401-aminocyclopropane-1-carboxylate synthase OS=Glyc... [more]
1A12_SOLLC3.891e-7068.621-aminocyclopropane-1-carboxylate synthase 2 OS=So... [more]
1A11_PRUMU6.638e-7069.891-aminocyclopropane-1-carboxylate synthase 1 OS=Pr... [more]
1A11_ARATH4.302e-6964.951-aminocyclopropane-1-carboxylate synthase-like pr... [more]
1A11_CUCMA2.210e-6566.131-aminocyclopropane-1-carboxylate synthase CMW33 O... [more]
1A12_CUCPE8.396e-6565.591-aminocyclopropane-1-carboxylate synthase 2 OS=Cu... [more]
1A12_ARATH8.396e-6564.101-aminocyclopropane-1-carboxylate synthase 2 OS=Ar... [more]
1A11_CUCPE1.871e-6465.051-aminocyclopropane-1-carboxylate synthase 1 OS=Cu... [more]
1A14_SOLLC1.341e-6269.431-aminocyclopropane-1-carboxylate synthase 4 OS=So... [more]

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Properties
Property NameValue
Genbank descriptionC04004F05SK FlavFr1 Citrus clementina cDNA clone C04004F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291772 ID=CX291772; Name=CX291772; organism=Citrus clementina; type=EST; length=556bp
CACGAGGAAGGACATGGGGCTCCCTGGCTTTAGAGTTGGCATTGTGTACT
CGTTTAATGATACTGTTGTGAATTGCGGCCGCAAGATGTCGAGCTTCGGT
TTAGTCTCTTCGCAGACTCAGTACTTGCTTGCTTCAATGCTCTCTGATGA
TGAGTTTGTCGATAACTTTCTCGTGGAGACCTCCAAGAGGTTAGCTAAGA
GACACCATAATTTCACCAAGGGACTTGAACAAGTTGGAATCAACTGCTTG
AAAAGCAATGCGGGTCTTTTTTTTTGGATGGACTTGCGTCATCTGCTTAA
GGAAAAAACATTAGAAGGTGAAATTGCTCTGTGGCGCACCATTGTCAACG
ATGTGAAGCTCAATGTTTCGCCTGGCTCTTCGTTTCAGTGTACTGAGCCT
GGTTGGTTTAGGGTTTGCATTGCTAACATGGATGATGACACATTGCAAGT
TGCACTAAACCGAATTGCCGCATTTGTGCAACAGGATAAGGAAAGCGAGA
AACCAACCAAGAAACGTTGGCAGCAGAATCTTCGCGTCAGCTTCTCATCG
AGGATC
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