CX291773

Overview
NameCX291773
Unique NameCX291773
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length408
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig85 contig Ccv1_Contig85:134..541. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291773 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.534e-39
Identity = 69/124 (55.65%), Postives = 99/124 (79.84%), Query Frame = 1
Query:   25 AKKQKHFVLVHGSNHGAWCWYKVKPRLEAVGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMPDTKHQPSYVVERVFE 396
            AK+QKHFVLVHG   GAW WYK+KP LE+ GH+VTA+DL+A+GIN +++ ++ +F +Y+EPL+E++AS+  DEKV+L+GHSFGG+S+ LA + +P KISVA+F++A MPD  H  +Y  E+  E
Sbjct:    7 AKQQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNE 130          
BLAST of CX291773 vs. ExPASy Swiss-Prot
Match: HNL_HEVBR (Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.964e-36
Identity = 69/121 (57.02%), Postives = 96/121 (79.34%), Query Frame = 1
Query:   40 HFVLVHGSNHGAWCWYKVKPRLEAVGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMPDTKHQPSYVVERVFE*F 402
            HFVL+H   HGAW W+K+KP LEA+GH+VTA+DLAASG++ ++I+++ SF EY+EPLL  L +L   EKVILVG S GGL++A+AADK+  KI+ A+F  + +PDT+H PSYVV+++ E F
Sbjct:    5 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF 125          
BLAST of CX291773 vs. ExPASy Swiss-Prot
Match: HNL_MANES (Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 1.410e-33
Identity = 64/121 (52.89%), Postives = 88/121 (72.73%), Query Frame = 1
Query:   40 HFVLVHGSNHGAWCWYKVKPRLEAVGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMPDTKHQPSYVVERVFE*F 402
            HFVL+H   HGAW W+K+KP LE  GH+VTA+D+AASGI+ ++I+ + SF EY+EPLL  L  L   EKVI+VG S  GL++A+AAD++  KI+  +F  + +PDT H PSY VE++ E F
Sbjct:    5 HFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTFLEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLLESF 125          
BLAST of CX291773 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 5.544e-30
Identity = 58/110 (52.73%), Postives = 83/110 (75.45%), Query Frame = 1
Query:   25 AKKQKHFVLVHGSNHGAWCWYKVKPRLEAVGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSA-DEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMP 351
            +  +KHF+LVHG  HGAWCWY+V   L A GHR TA+D+AASG +  ++ +V +F EY+ PLL+ +A+ +A  E+++LVGHS GGLSVALA ++FP K++ A+F+ A MP
Sbjct:    5 SSSKKHFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMP 114          
BLAST of CX291773 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 5.544e-30
Identity = 58/110 (52.73%), Postives = 83/110 (75.45%), Query Frame = 1
Query:   25 AKKQKHFVLVHGSNHGAWCWYKVKPRLEAVGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSA-DEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMP 351
            +  +KHF+LVHG  HGAWCWY+V   L A GHR TA+D+AASG +  ++ +V +F EY+ PLL+ +A+ +A  E+++LVGHS GGLSVALA ++FP K++ A+F+ A MP
Sbjct:    5 SSSKKHFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMP 114          
BLAST of CX291773 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSJ (Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.613e-29
Identity = 56/105 (53.33%), Postives = 77/105 (73.33%), Query Frame = 1
Query:   37 KHFVLVHGSNHGAWCWYKVKPRLEAVGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMP 351
            KHFV VHG  HGAWCWY+V   L A GHR TA+D+AA+G +  +  +V S  EY+ PLL+ +A+ +  E+++LVGHS GGLS+ALA ++FP K++ A+FL A MP
Sbjct:    6 KHFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMP 110          
BLAST of CX291773 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSI (Probable esterase PIR7A OS=Oryza sativa subsp. indica GN=PIR7A PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.613e-29
Identity = 56/105 (53.33%), Postives = 77/105 (73.33%), Query Frame = 1
Query:   37 KHFVLVHGSNHGAWCWYKVKPRLEAVGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMP 351
            KHFV VHG  HGAWCWY+V   L A GHR TA+D+AA+G +  +  +V S  EY+ PLL+ +A+ +  E+++LVGHS GGLS+ALA ++FP K++ A+FL A MP
Sbjct:    6 KHFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMP 110          
BLAST of CX291773 vs. ExPASy Swiss-Prot
Match: Y1399_ARATH (Probable esterase At1g33990 OS=Arabidopsis thaliana GN=At1g33990 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.013e-23
Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 1
Query:   37 KHFVLVHGSNHGAWCWYKVKPRLEAVGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMPDTKHQP 369
            K FVLVHG   GAWCWYK+   LE  G     +DL   G NM     V +  EY++PL+++L +L  +EKVILVGHS GG S++ A ++FP KIS AIF+ A M     +P
Sbjct:   96 KKFVLVHGEGFGAWCWYKMVASLEESGLSPVTVDLTGCGFNMTDTNTVSTLEEYSKPLIDLLENLPEEEKVILVGHSTGGASISYALERFPEKISKAIFVCATMVSDGQRP 206          
BLAST of CX291773 vs. ExPASy Swiss-Prot
Match: PPD_RAPSA (Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.256e-23
Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 1
Query:   40 HFVLVHGSNHGAWCWYKVKPRLEAVGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFM 348
            HFV VHG++HGAWCWYK+   L A G + T++DL  +GIN+     V  F  YN PL  +L+ L +  K++LVGHS GG SV  A  KF  KIS+ ++L A M
Sbjct:   13 HFVFVHGASHGAWCWYKLTTLLVAAGFKATSVDLTGAGINLTDSNTVFDFDHYNRPLFSLLSDLPSHHKIVLVGHSIGGGSVTEALCKFTDKISMVVYLAADM 115          
BLAST of CX291773 vs. ExPASy Swiss-Prot
Match: PPD_ARATH (Probable pheophorbidase OS=Arabidopsis thaliana GN=PPD PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.573e-23
Identity = 54/111 (48.65%), Postives = 69/111 (62.16%), Query Frame = 1
Query:   40 HFVLVHGSNHGAWCWYKVKPRLEAVGHRVTAMDLAASGINMKKIQDVRSFYEYNEPLLEILASLSADEKVILVGHSFGGLSVALAADKFPHKISVAIFLTAFMPDTKHQPS 372
            HFV VHG++HGAWCWYK+   L+A G + T++DL  +GI++     V    +YN PL  +L+ L    KVILVGHS GG SV  A  KF  KIS+AI+L A M      PS
Sbjct:   12 HFVFVHGASHGAWCWYKLTTLLDAAGFKSTSVDLTGAGISLIDSNIVFDSDQYNRPLFSLLSDLPPHHKVILVGHSIGGGSVTEALCKFTDKISMAIYLAASMVQPGSIPS 122          
The following BLAST results are available for this feature:
BLAST of CX291773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PNAE_RAUSE6.534e-3955.65Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
HNL_HEVBR3.964e-3657.02Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1... [more]
HNL_MANES1.410e-3352.89Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 ... [more]
PIR7B_ORYSJ5.544e-3052.73Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI5.544e-3052.73Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
PIR7A_ORYSJ1.613e-2953.33Probable esterase PIR7A OS=Oryza sativa subsp. jap... [more]
PIR7A_ORYSI1.613e-2953.33Probable esterase PIR7A OS=Oryza sativa subsp. ind... [more]
Y1399_ARATH1.013e-2347.75Probable esterase At1g33990 OS=Arabidopsis thalian... [more]
PPD_RAPSA2.256e-2348.54Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=... [more]
PPD_ARATH8.573e-2348.65Probable pheophorbidase OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionC04004F06SK FlavFr1 Citrus clementina cDNA clone C04004F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291773 ID=CX291773; Name=CX291773; organism=Citrus clementina; type=EST; length=408bp
TCGGCACGAGGGAAAATGACAGAAGCCAAGAAGCAAAAGCATTTTGTTCT
AGTGCATGGATCAAACCATGGAGCTTGGTGCTGGTATAAGGTGAAGCCAC
GGCTGGAGGCAGTCGGTCACCGGGTGACGGCGATGGACCTTGCAGCCTCC
GGCATCAACATGAAGAAAATCCAGGATGTTCGTTCATTTTATGAATACAA
TGAGCCTTTGTTGGAGATTTTGGCCTCACTTTCAGCAGACGAGAAGGTCA
TACTTGTCGGACACAGCTTCGGAGGCTTGAGTGTGGCCCTGGCAGCTGAC
AAGTTCCCACACAAAATTTCAGTTGCTATTTTCTTAACAGCATTCATGCC
AGACACCAAACACCAACCATCTTATGTTGTGGAGCGGGTATTTGAATAAT
TTATTTCA
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