CX291776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291776 vs. ExPASy Swiss-Prot
Match: CCS_CITSI (Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis GN=CCS PE=3 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 7.471e-72 Identity = 128/138 (92.75%), Postives = 128/138 (92.75%), Query Frame = 1 Query: 91 MATLLSPFSPSPLAKVSQIIDSTXXXXXXXXXXGRQNACSRKADHHHHHRIRTSKFGNFLELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIG 504 MATLLSPFSPSPLAKVSQIIDST GRQNACSRKADHHHHHRIRTSKFGNFLELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIG Sbjct: 1 MATLLSPFSPSPLAKVSQIIDSTSSPSFSLFPLGRQNACSRKADHHHHHRIRTSKFGNFLELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIG 138
BLAST of CX291776 vs. ExPASy Swiss-Prot
Match: CCS_CAPAN (Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum GN=CCS PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.821e-29 Identity = 72/140 (51.43%), Postives = 86/140 (61.43%), Query Frame = 1 Query: 91 MATLLSPFSPSPLAKVSQIIDSTXXXXXXXXXXGRQNACSRKADHHHHHRIRTSK-FGNFLELTPESVPEFLDFDLPWFHPS-DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIG 504 M TLL PF PSPL + T N +K H+R ++S F +FL+L P S PE LD ++ W D +DVIIIGTGPAGLRLAEQVS ++ +KVCCVDPSPLS WPNNYGVWVDEFE +G Sbjct: 1 METLLKPF-PSPLLSIP-----TPNMYSFKHNSTFPNPTKQKDSRKFHYRNKSSTHFCSFLDLAPTSKPESLDVNISWVDTDLDGAEFDVIIIGTGPAGLRLAEQVS-KYGIKVCCVDPSPLSMWPNNYGVWVDEFEKLG 133
BLAST of CX291776 vs. ExPASy Swiss-Prot
Match: NXS_SOLTU (Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 8.094e-26 Identity = 60/104 (57.69%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 199 NACSRKADHHHHHRIRTSK-FGNFLELTPESVPEFLDFDLPWFHP-SDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIG 504 N ++K H R +SK F +FL+L P S PE D ++ P S R ++DVIIIG GPAGLRLAE VS ++ +KVCCVDPSPLS WPNNYGVWVDEFE++G Sbjct: 31 NPTTKKKSRKCHFRNESSKLFCSFLDLAPISKPESFDVNISLVDPNSGRAQFDVIIIGAGPAGLRLAEHVS-KYGIKVCCVDPSPLSMWPNNYGVWVDEFENLG 133
BLAST of CX291776 vs. ExPASy Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.635e-18 Identity = 42/76 (55.26%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 268 LELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFE 495 LEL PE+ E LDF+LP + PS + D+ ++G GPAGL +A+QVS + VC +DP+P WPNNYGVWVDEFE Sbjct: 58 LELVPETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEA-GLSVCSIDPNPKLIWPNNYGVWVDEFE 132
BLAST of CX291776 vs. ExPASy Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.635e-18 Identity = 42/76 (55.26%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 268 LELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFE 495 LEL PE+ E LDF+LP + PS + D+ ++G GPAGL +A+QVS + VC +DP+P WPNNYGVWVDEFE Sbjct: 56 LELVPETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEA-GLSVCSIDPNPKLIWPNNYGVWVDEFE 130
BLAST of CX291776 vs. ExPASy Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 8.112e-18 Identity = 43/82 (52.44%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 250 SKFGNFLELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFE 495 +K LEL PE+ E LDF+LP + PS + D+ ++G GPAGL +A+QVS + V +DPSP WPNNYGVWVDEFE Sbjct: 52 AKSSALLELVPETKKENLDFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEA-GLSVVSIDPSPKLIWPNNYGVWVDEFE 132
BLAST of CX291776 vs. ExPASy Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.258e-17 Identity = 42/76 (55.26%), Postives = 52/76 (68.42%), Query Frame = 1 Query: 268 LELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFE 495 L+L PE+ E LDF+LP + S D+ I+G GPAGL +A+QVS + VC +DPSP WPNNYGVWVDEFE Sbjct: 57 LDLVPETKKENLDFELPLYDTSKSQVVDLAIVGGGPAGLAVAQQVSEA-GLSVCSIDPSPKLIWPNNYGVWVDEFE 131
BLAST of CX291776 vs. ExPASy Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.583e-13 Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 268 LELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDI 501 L+L PE E L+FDLP + PS + D+ ++G GP + + + V +DP+P WPNNYGVWVDEFED+ Sbjct: 62 LDLVPEIKKEHLEFDLPLYDPSKALTLDLAVVGGGPLARSCSTSLGG--GLSVVSIDPNPKLIWPNNYGVWVDEFEDM 137 The following BLAST results are available for this feature:
BLAST of CX291776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291776 ID=CX291776; Name=CX291776; organism=Citrus clementina; type=EST; length=505bpback to top |