CX291809

Overview
NameCX291809
Unique NameCX291809
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length619
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig385 contig Ccv1_Contig385:1..619. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291809 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.824e-75
Identity = 126/206 (61.17%), Postives = 166/206 (80.58%), Query Frame = 2
Query:    2 IIKNREKAMRAGEAANDDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYLAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAK 619
            II  R KA++AGE   DDLLG+L+E++ +EI++ GN K+ G S+NDVIEECKLFY AGQETT VLL WT +LLSKH +WQERAR+EVLQ FG NKP++  LNHLK V MILYEVLRLYPP+  L++ V K+TKLG+ T+PAG Q+ LP +++H++  +WG+DA+EF P RF +G++ A KN V+Y PF+ GPR+C+GQNFAL++AK
Sbjct:  276 IINKRMKALKAGEPGEDDLLGVLLESNIQEIQKQGNKKDGGMSINDVIEECKLFYFAGQETTGVLLTWTTILLSKHPEWQERAREEVLQAFGKNKPEFERLNHLKYVSMILYEVLRLYPPVIDLTKIVHKDTKLGSYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAK 481          
BLAST of CX291809 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.333e-27
Identity = 68/218 (31.19%), Postives = 114/218 (52.29%), Query Frame = 2
Query:    5 IKNREKAMRAGEAAND--DLLGILMETSFREIEEHGNNK----------NVGFSMNDVIEECKLFYLAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYP-PLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAK 619
            IK RE+  + G    +  D + + ++    ++E  G N           N   +  +++ +C +F +AG +TT++ L++   LL+ H + Q++ ++EV +   N +    +L+ LK ++ +  E LRLYP    A SR  ++ TKLGN+ +  G  I +    +H DP +WGDDA +FKPER+    S     +  Y PF  GPR C+G   A +E K
Sbjct:  259 IKQREEDQKNGIEIGEPADFIDLFLDAKAEDVEHFGENNGDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPNPEVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEK 476          
BLAST of CX291809 vs. ExPASy Swiss-Prot
Match: C13B1_CAEEL (Putative cytochrome P450 cyp-13B1 OS=Caenorhabditis elegans GN=cyp-13B1 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 6.613e-27
Identity = 72/209 (34.45%), Postives = 119/209 (56.94%), Query Frame = 2
Query:    5 IKNREKAMRAG-EAANDDLLGILMETSFREIE--EHGNNKNVGFSMNDVIEECKLFYLAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYP-PLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAK 619
            I+ RE+  + G E A +D + + +     ++E  E G+      +  DVI  C +F LAG +TT+  L +   LL+KH +  + A++EV  V G+    Y ++  LK +  ++ E LRLYP    A SR  +K T LG++ +  GV+I   ++ +H+  E+WG++A +F PER+ E    ++++ +S+ PF +GPR CVG    L EAK
Sbjct:  262 IQEREENAKLGFENAENDFIDMFLNYYSEQVEDIEFGSTVEKKVTAEDVIGACFVFLLAGFDTTANSLAYASYLLAKHPEKMKLAQEEVDTVVGSENVSYDDMTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGDIYIDKGVKIEADVMSLHRSKEIWGENADDFVPERWLE---PSSRHTMSWIPFGAGPRQCVGMRLGLSEAK 467          
BLAST of CX291809 vs. ExPASy Swiss-Prot
Match: C13A2_CAEEL (Putative cytochrome P450 CYP13A2 OS=Caenorhabditis elegans GN=cyp-13A2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.550e-26
Identity = 65/215 (30.23%), Postives = 121/215 (56.28%), Query Frame = 2
Query:    8 KNREKAMRAGEAANDDLLGILMETSFREIE------EHGNNKNVGF----SMNDVIEECKLFYLAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLT-ALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAK 619
            + REK   +GE    D + + ++    +++      E  + +N+      S ++V+ +C LF + G +TT++ L++   LL+ +   QE+  +E+ + FG ++ ++ +L  LK +  ++ E LRLYP  + + SR  +K T +  + + AGV + +    +H DPELWG+D  EFKPER++    +  +++ +Y PF  GPR C+G   A++E K
Sbjct:  261 REREKGAESGEP--QDFIDLFLDARSDDVDFSAEAREDFSKRNLKITKELSADEVVGQCFLFLIGGFDTTALSLSYVTYLLAVNPKIQEKVIEEIAREFGTSEVEFEKLGRLKYMDCVIKEALRLYPLASISNSRKCMKTTTVNGVKIEAGVYVQMDTWSLHYDPELWGEDVKEFKPERWS--TDEPLEHKGAYLPFGLGPRQCIGMRLAIMEQK 471          
BLAST of CX291809 vs. ExPASy Swiss-Prot
Match: CP4D1_DROME (Cytochrome P450 4d1 OS=Drosophila melanogaster GN=Cyp4d1 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.379e-24
Identity = 70/213 (32.86%), Postives = 113/213 (53.05%), Query Frame = 2
Query:    2 IIKNREKAMRAG---EAANDDL-LGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYLAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAK 619
            I++ RE+ +R G   E++NDD  +G   + +F +I           S  D+ EE   F   G +TTS  L +    ++ H + Q++  +E+  V GN+K     Y  LN L  V + + E LR+YP +  L R VL++ ++    +PAG  IG+  + + +  EL+ +    FKPERF    +    N  +Y PF++GPR C+GQ FA++E K
Sbjct:  256 IVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPN-SFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIK 467          
BLAST of CX291809 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.379e-24
Identity = 60/203 (29.56%), Postives = 116/203 (57.14%), Query Frame = 2
Query:   14 REKAMRAGEAANDDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYLAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAK 619
            +E  ++  +    D L +++ +  +  +E  N+K    S  +++ +  +F  AG ETTS  L++ + +L+ H D Q++ ++E+   F N  P  Y  L  ++ + M++ E LR++P    L R   K+ ++  +++P G  + +P+ ++H+DP+LW  +  EF+PERF++  +K + N   Y PF +GPR C+G  FA++  K
Sbjct:  257 KESRLKDNQKPRVDFLQLMINS--QNSKETDNHK--ALSDQELMAQSVIFIFAGYETTSNTLSFLLYILATHPDVQQKLQEEIDATFPNKAPPTYDVLAQMEYLDMVVNETLRMFPIAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLW-PEPEEFRPERFSKK-NKDSINPYVYLPFGTGPRNCIGMRFAIMNMK 453          
BLAST of CX291809 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.352e-24
Identity = 63/191 (32.98%), Postives = 109/191 (57.07%), Query Frame = 2
Query:   53 DLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYLAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAK 619
            DLL +++ + + +E++ H +  N      +++ +  +F  AG ETTS  L+     L+ H D Q++ ++E+   F N  P  Y  L  ++ + M++ E LRLYP    L RA  K+ ++  + +P G  + +P+ ++H+DP+LW  +  EF+PERF++   K   N  +Y PF +GPR C+G  FAL+  K
Sbjct:  270 DLLQLMINSQNSKEMDPHKSLSN-----EELVAQGIIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKAPPTYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLW-PEPEEFRPERFSKK-HKDTINPYTYLPFGTGPRNCIGMRFALMNMK 453          
BLAST of CX291809 vs. ExPASy Swiss-Prot
Match: C13AA_CAEEL (Putative cytochrome P450 CYP13A10 OS=Caenorhabditis elegans GN=cyp-13A10 PE=2 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 4.012e-24
Identity = 65/214 (30.37%), Postives = 110/214 (51.40%), Query Frame = 2
Query:   11 NREKAMRAGEAANDDLLGILMETSFREIEEHGNNK----------NVGFSMNDVIEECKLFYLAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLT-ALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAK 619
            +R+  +  GE    D + + +E    ++E    N           N   +  +++ +C +F +AG +TT++ L++T  LL+ H + Q++ ++E+ +        +  L+ LK +  I+ E LRLYP  T A SR  ++ TKLGN+ +  G  + +    +H D ++WGDDA EFKPER+ +        +  Y  F  GPR CVG   A +E K
Sbjct:  265 DRKNGIEIGEP--QDFIDLFLEARADDVEHFQENNGDFSKTSSYGNRQLTTQEIVGQCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQEEIERECIEPSISFDHLSKLKYMDCIIKETLRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEK 476          
BLAST of CX291809 vs. ExPASy Swiss-Prot
Match: CP4D1_DROSI (Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4d1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.844e-24
Identity = 69/213 (32.39%), Postives = 112/213 (52.58%), Query Frame = 2
Query:    2 IIKNREKAMRAG---EAANDDL-LGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYLAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAK 619
            I++ RE+ +R G   E++ DD  +G   + +F +I           S  D+ EE   F   G +TTS  L +    ++ H + Q++  +E+  V GN+K     Y  LN L  V + + E LR+YP +  L R VL++ ++    +PAG  IG+  + + +  EL+ +    FKPERF    +    N  +Y PF++GPR C+GQ FA++E K
Sbjct:  256 IVQRREELIREGSSQESSKDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPN-SFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIK 467          
BLAST of CX291809 vs. ExPASy Swiss-Prot
Match: C13A6_CAEEL (Putative cytochrome P450 CYP13A6 OS=Caenorhabditis elegans GN=cyp-13A6 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.844e-24
Identity = 55/169 (32.54%), Postives = 98/169 (57.99%), Query Frame = 2
Query:  116 NVGFSMNDVIEECKLFYLAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYP-PLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAK 619
            N   + +++I +C +F  AG +TT++ L++   LL+ H + Q + ++EV +   + +  +  L+ LK ++ ++ E LRLYP   TA +R  ++ET +  +    G+ I +    +H +P +WG+D  +FKPER+  G  +  ++  SY PF SGPR C+G   A +E K
Sbjct:  306 NKELTFDEIIAQCFVFLAAGFDTTALSLSYATYLLATHPEIQTKLQEEVDRECPDPEIFFDHLSKLKYLECVMKETLRLYPLGTTANTRKCMRETTINGVNFDEGMNIQVDTWTLHHNPRIWGEDVEDFKPERWENGACEHLEHNGSYIPFGSGPRQCIGMRLAQMEQK 474          
The following BLAST results are available for this feature:
BLAST of CX291809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 392
Match NameE-valueIdentityDescription
C72A1_CATRO3.824e-7561.17Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
C13A1_CAEEL1.333e-2731.19Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]
C13B1_CAEEL6.613e-2734.45Putative cytochrome P450 cyp-13B1 OS=Caenorhabditi... [more]
C13A2_CAEEL9.550e-2630.23Putative cytochrome P450 CYP13A2 OS=Caenorhabditis... [more]
CP4D1_DROME1.379e-2432.86Cytochrome P450 4d1 OS=Drosophila melanogaster GN=... [more]
CP3AO_SHEEP1.379e-2429.56Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
CP3AT_PIG2.352e-2432.98Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
C13AA_CAEEL4.012e-2430.37Putative cytochrome P450 CYP13A10 OS=Caenorhabditi... [more]
CP4D1_DROSI6.844e-2432.39Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4... [more]
C13A6_CAEEL6.844e-2432.54Putative cytochrome P450 CYP13A6 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionC04005C10SK FlavFr1 Citrus clementina cDNA clone C04005C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291809 ID=CX291809; Name=CX291809; organism=Citrus clementina; type=EST; length=619bp
AATCATCAAAAATAGGGAGAAGGCAATGAGAGCAGGGGAAGCTGCGAATG
ATGACTTGTTAGGCATACTGATGGAAACCAGTTTTAGAGAGATTGAAGAA
CATGGAAATAACAAAAATGTTGGGTTCAGCATGAACGATGTGATCGAAGA
GTGTAAGCTATTTTACCTTGCCGGCCAAGAGACTACCTCTGTTTTGCTTA
ATTGGACAATGGTCTTATTGAGCAAGCATCAAGATTGGCAAGAACGTGCA
AGGCAAGAGGTTTTGCAAGTGTTTGGCAATAATAAGCCCGACTATGGTGA
ATTGAACCACCTCAAAATTGTCCAGATGATACTTTACGAGGTACTCAGGC
TTTATCCGCCCTTAACTGCGCTTAGTCGAGCTGTTCTTAAGGAAACGAAA
CTCGGAAACTTGACATTACCCGCTGGGGTTCAAATTGGCTTGCCAATGAT
CCTAGTTCACCAGGATCCTGAACTTTGGGGTGACGATGCAGTTGAGTTTA
AGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCGGCAAAAAATCAAGTT
TCATATTTCCCATTCGCATCGGGTCCTAGGATATGTGTTGGACAAAATTT
TGCTCTAGTAGAAGCAAAA
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