CX291810

Overview
NameCX291810
Unique NameCX291810
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length566
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX291810 vs. ExPASy Swiss-Prot
Match: FB84_ARATH (F-box protein At1g70590 OS=Arabidopsis thaliana GN=At1g70590 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.823e-36
Identity = 76/118 (64.41%), Postives = 89/118 (75.42%), Query Frame = 1 
Query:    1 ARGWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT----SRDRAMLVVDSWRAMP 342
            A  WYL+AAEGGYVRAMYN SLCYS GEGLP + + ARKWMKRAAD GH KAQ EHGL LF+EGEM+K+V+YLELA R GE AA  VK V+ QQLSAT    +   A+   ++WR +P
Sbjct:  231 ATKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGHSKAQFEHGLALFSEGEMLKSVLYLELAERGGEAAATPVKEVVHQQLSATFGGQAVHHAIHQANNWRPLP 348
The following BLAST results are available for this feature:
BLAST of CX291810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FB84_ARATH3.823e-3664.41F-box protein At1g70590 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionC04005C11SK FlavFr1 Citrus clementina cDNA clone C04005C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291810 ID=CX291810; Name=CX291810; organism=Citrus clementina; type=EST; length=566bp
GCACGAGGGTGGTATTTAAGAGCTGCTGAAGGTGGCTATGTGCGTGCTAT
GTACAACACCTCTCTTTGCTATTCCTTTGGGGAAGGCTTGCCACTGAGTC
ACAGACAAGCGAGGAAATGGATGAAAAGAGCAGCTGATTGTGGTCACGGC
AAAGCTCAACTTGAGCATGGGCTTGGTCTATTTACGGAAGGAGAGATGAT
GAAAGCTGTGGTTTACCTAGAACTTGCAACACGTGCTGGTGAAACAGCAG
CAGATCATGTCAAGAATGTAATTCTCCAACAACTGTCAGCTACTTCACGT
GATCGTGCCATGTTAGTCGTCGACAGTTGGCGTGCTATGCCTTCCCTTCA
CTGAGTCTGACCTGATGATGGATTACAGGCTTTATAGCTATTATACTAAA
TTCCTTTACGCTTTTTTTTTCTTCCCATTAGTTTTCTCCGTTAGTACATA
CTATGTCCTCTTTTATCTTTTCCCTTCCCCTTTTGATCCTGTTTTTGAAA
AATTATAAATATTATACGTGCTCTTAGAAGCATTTAGCTTTATAGCTCTA
AAAAAAAAAAAAAAAA
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