CX291839

Overview
NameCX291839
Unique NameCX291839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length644
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX291839 vs. ExPASy Swiss-Prot
Match: CTR1_ARATH (Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.472e-19
Identity = 47/66 (71.21%), Postives = 50/66 (75.76%), Query Frame = 3 
Query:   12 GSSSGKSWAQQTEESYXXXXXXXXXXXXEATCADDPNFLDPVPDESALRSGPASSPEAISHRFWVS 209
            GSSSGKSWAQQTEESY            EATCADDPNFLDPVPDESALR+ P SS E +SHRFWV+
Sbjct:  154 GSSSGKSWAQQTEESYQLQLALALRLSSEATCADDPNFLDPVPDESALRTSP-SSAETVSHRFWVN 218
The following BLAST results are available for this feature:
BLAST of CX291839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CTR1_ARATH2.472e-1971.21Serine/threonine-protein kinase CTR1 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionC04005H02SK FlavFr1 Citrus clementina cDNA clone C04005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291839 ID=CX291839; Name=CX291839; organism=Citrus clementina; type=EST; length=644bp
AGGTGACTGATGGCTCCTCGTCGGGGAAAAGCTGGGCCCAGCAGACTGAA
GAGAGTTATCAGTTACAGTTGGCGTTGGCGCTGAGGCTTTCGTCAGAAGC
CACTTGTGCTGATGATCCGAATTTTTTGGATCCAGTTCCTGATGAGTCCG
CGTTAAGGTCTGGGCCCGCAAGCTCGCCAGAGGCTATTTCACATCGTTTT
TGGGTGAGTTTTCATTATTGGCGGTTGCTTTTCACTTTAGGTTATGATTT
TGATAGATGGTTTGTTTTTTCAGAGCTACTTAAATATACTGTCTGTGAAA
TAAACTGTAGATATGAACTGAGTGCTCACTGATAATGGTAGCTAAGCAAA
TGTCTCTTTATTGAGGGTGAACATCTGCAGTGGACATGAAATGATCATTG
TAATTATTCCTTGGATTTTGTTGCATAGTTATTTGACATTTTCACTATTT
GGAGGAGCAAAATGAATGTATTTCATAGAAGTTGGAGACATAATATGGAG
GGATGGTATTCAGAGGAAAAGAGGAGAGAAGTTGTTTGAGAAGATGCTGT
CATGTGTGAAATTATTTACTAGGAGCACCTATTGGATTGTTTCTTATGAT
GAAAATGGATGAGGAGACATCAAATATAGCGAGGGAATAACGAG
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