CX291859

Overview
NameCX291859
Unique NameCX291859
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length146
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4988 contig Ccv1_Contig4988:51..196. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX291859 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.927e-12
Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = 3 
Query:    9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI 146
            +KHF+LVHG+ HGAWCWY++ A L A GHR TA+D+AASG +  R+
Sbjct:    8 KKHFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARV 53
[Close]
BLAST of CX291859 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.927e-12
Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = 3 
Query:    9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI 146
            +KHF+LVHG+ HGAWCWY++ A L A GHR TA+D+AASG +  R+
Sbjct:    8 KKHFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARV 53
[Close]
BLAST of CX291859 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.015e-11
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 3 
Query:    6 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI 146
            ++KHFVLVHG   GAW WYKLK  L + GH+VTAVDL+A+GIN +R+
Sbjct:    9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRL 55
[Close]
BLAST of CX291859 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSJ (Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.490e-11
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 3 
Query:   12 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKR 143
            KHFV VHG+ HGAWCWY++ A L A GHR TA+D+AA+G +  R
Sbjct:    6 KHFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPAR 49
[Close]
BLAST of CX291859 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSI (Probable esterase PIR7A OS=Oryza sativa subsp. indica GN=PIR7A PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.490e-11
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 3 
Query:   12 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKR 143
            KHFV VHG+ HGAWCWY++ A L A GHR TA+D+AA+G +  R
Sbjct:    6 KHFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPAR 49
The following BLAST results are available for this feature:
BLAST of CX291859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PIR7B_ORYSJ6.927e-1260.87Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI6.927e-1260.87Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
PNAE_RAUSE2.015e-1163.83Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
PIR7A_ORYSJ4.490e-1161.36Probable esterase PIR7A OS=Oryza sativa subsp. jap... [more]
PIR7A_ORYSI4.490e-1161.36Probable esterase PIR7A OS=Oryza sativa subsp. ind... [more]
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Properties
Property NameValue
Genbank descriptionC04006B10SK FlavFr1 Citrus clementina cDNA clone C04006B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291859 ID=CX291859; Name=CX291859; organism=Citrus clementina; type=EST; length=146bp
AGGTGGAAGAGAAGCATTTTGTTCTAGTTCATGGAGTAAACCATGGAGCA
TGGTGTTGGTACAAACTGAAAGCAAGGCTGGTGGCGGGGGGTCACCGCGT
GACGGCTGTGGACCTAGCCGCCTCGGGCATCAACATGAAGAGAATT
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