CX291860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291860 vs. ExPASy Swiss-Prot
Match: UBAX1_ARATH (UBA and UBX domain-containing protein At4g15410 OS=Arabidopsis thaliana GN=At4g15410 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.643e-29 Identity = 60/94 (63.83%), Postives = 74/94 (78.72%), Query Frame = 2 Query: 5 PVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQKF 286 P+N A + S GLVVD P+TS+Q+RLADGTRL++ FN HHT+ D+ FIDASRPG ++ YQL MGFPPK L + QTIEQAG+AN+VVIQKF Sbjct: 328 PMNVAPAPSRGLVVDPAAPTTSIQLRLADGTRLVSRFNNHHTVRDVRGFIDASRPGGSKEYQLLTMGFPPKQLTELDQTIEQAGIANAVVIQKF 421
BLAST of CX291860 vs. ExPASy Swiss-Prot
Match: NSF1C_PONAB (NSFL1 cofactor p47 OS=Pongo abelii GN=NSFL1C PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 9.752e-16 Identity = 40/88 (45.45%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 20 SSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQK 283 + +S +++DE+ P+T++QIRLADG RL+ FN H ISDI FI +RP A + M FP K LAD +QT+++A L N+V++Q+ Sbjct: 281 AKASSSILIDESEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANLLNAVIVQR 368
BLAST of CX291860 vs. ExPASy Swiss-Prot
Match: NSF1C_HUMAN (NSFL1 cofactor p47 OS=Homo sapiens GN=NSFL1C PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 9.752e-16 Identity = 40/88 (45.45%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 20 SSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQK 283 + +S +++DE+ P+T++QIRLADG RL+ FN H ISDI FI +RP A + M FP K LAD +QT+++A L N+V++Q+ Sbjct: 281 AKASSSILIDESEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPNKELADESQTLKEANLLNAVIVQR 368
BLAST of CX291860 vs. ExPASy Swiss-Prot
Match: NSF1C_BOVIN (NSFL1 cofactor p47 OS=Bos taurus GN=NSFL1C PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.837e-15 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 20 SSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQK 283 + +S + +DE+ P+T++QIRLADG RL+ FN H ISDI FI +RP A + M FP K LAD QT+++A L N+V++Q+ Sbjct: 281 AKASSSISIDESQPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLMTTFPNKELADENQTLKEANLLNAVIVQR 368
BLAST of CX291860 vs. ExPASy Swiss-Prot
Match: NSF1C_RAT (NSFL1 cofactor p47 OS=Rattus norvegicus GN=Nsfl1c PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.408e-14 Identity = 39/88 (44.32%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 20 SSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQK 283 + +S ++++E P+T++QIRLADG RL+ FN H ISDI FI +RP A + M FP K LAD QT+++A L N+V++Q+ Sbjct: 281 AKASSSILINEAEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLMTTFPNKELADENQTLKEANLLNAVIVQR 368
BLAST of CX291860 vs. ExPASy Swiss-Prot
Match: NSF1C_MOUSE (NSFL1 cofactor p47 OS=Mus musculus GN=Nsfl1c PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.408e-14 Identity = 39/88 (44.32%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 20 SSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQK 283 + +S ++++E P+T++QIRLADG RL+ FN H ISDI FI +RP A + M FP K LAD QT+++A L N+V++Q+ Sbjct: 281 AKASSSILINEAEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLMTTFPNKELADENQTLKEANLLNAVIVQR 368
BLAST of CX291860 vs. ExPASy Swiss-Prot
Match: NSF1C_CHICK (NSFL1 cofactor p47 OS=Gallus gallus GN=NSFL1C PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.137e-14 Identity = 38/88 (43.18%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 20 SSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQK 283 + +S + +DE+ P T++QIRLADG RL+ FN +H I DI FI +RP A + M FP K L D QT+++A L N+V++Q+ Sbjct: 280 AKASSAIAIDESEPVTNIQIRLADGGRLVQKFNHNHRIRDIRLFIVDARPAMAATSFVLMTTFPNKELTDENQTLKEANLLNAVIVQR 367
BLAST of CX291860 vs. ExPASy Swiss-Prot
Match: UBX2B_MOUSE (UBX domain-containing protein 2B OS=Mus musculus GN=Ubxn2b PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 9.127e-14 Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 8 VNTASSSSE--------GLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQK 283 V+T SS E +++D+++P+T +QIRLADG+RL+ FN H I D+ FI SRP A + + FP K L D T T+++A + N+V++Q+ Sbjct: 230 VSTPSSPEEEDKSILNAAVLIDDSMPTTKIQIRLADGSRLVQRFNSTHRILDVRDFIVRSRPEFATTDFILVTSFPSKELTDETVTLQEADILNTVILQQ 329
BLAST of CX291860 vs. ExPASy Swiss-Prot
Match: UBX2B_XENLA (UBX domain-containing protein 2B OS=Xenopus laevis GN=ubxn2b PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.656e-13 Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 2 Query: 44 VDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQK 283 +DE++P+T +QIRLADGTRLI FNL H I D+ FI +R A+ + FP L D TQT+E+A + N+V++Q+ Sbjct: 269 LDEHVPTTKIQIRLADGTRLIQRFNLSHRIMDVRQFIIHARSDFAQCDFALLTTFPNVELTDETQTLEEADILNTVILQR 348
BLAST of CX291860 vs. ExPASy Swiss-Prot
Match: UBX2B_RAT (UBX domain-containing protein 2B OS=Rattus norvegicus GN=Ubxn2b PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 8 VNTASSSSE--------GLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQK 283 V+T SS E +++D+++P+T +QIRLADG+RLI FN H I D+ FI SRP A + + FP K L D + T++ A + N+V++Q+ Sbjct: 230 VSTPSSPEEEDKSILNAAVLIDDSVPTTKIQIRLADGSRLIQRFNSTHRILDVRDFIVQSRPEFATTDFILVTSFPSKELTDESVTLQDADILNTVILQQ 329 The following BLAST results are available for this feature:
BLAST of CX291860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291860 ID=CX291860; Name=CX291860; organism=Citrus clementina; type=EST; length=503bpback to top |