CX291901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291901 vs. ExPASy Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 2.526e-87 Identity = 162/185 (87.57%), Postives = 175/185 (94.59%), Query Frame = 3 Query: 63 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS 617 MKTILSSETM+IPDGV +K+NAKVIEVEGPRGKL RDFKHLNLDF L+TDE GK+KLKIDAWFGSRKTSAAIRTALSHV NLITGVTKG+RYKMRFVYA FPINASI N+NK+IEIRNFLGEKKVRKVD+LDGV++IRS+KVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYVS Sbjct: 1 MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDEN-GKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFLGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVS 184
BLAST of CX291901 vs. ExPASy Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=2 SV=3) HSP 1 Score: 320.472 bits (820), Expect = 4.308e-87 Identity = 156/185 (84.32%), Postives = 174/185 (94.05%), Query Frame = 3 Query: 63 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS 617 MKTILSSETMDIPD V +K++AKVIEVEGPRGKL RDFKHLNLDF L+ D ETGK+KLKID+WFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASIG + K+IEIRNFLGEKKVRKV+MLDGVT++RS+KVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYVS Sbjct: 1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVS 185
BLAST of CX291901 vs. ExPASy Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 2.792e-86 Identity = 154/185 (83.24%), Postives = 173/185 (93.51%), Query Frame = 3 Query: 63 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS 617 MKTILSSETMDIPDGV +K+NAKVIEVEGPRGKL+RDFKHLNLDF L+ D+ TGKR+LKID+WFGSRKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI NNK+IEIRNFLGEKKVRKV+MLDGV ++RS+KVKDE++L+GNDIELVSRS ALINQKCHVK KDIRKFLDGIYVS Sbjct: 1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVS 185
BLAST of CX291901 vs. ExPASy Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3) HSP 1 Score: 305.064 bits (780), Expect = 1.873e-82 Identity = 152/185 (82.16%), Postives = 171/185 (92.43%), Query Frame = 3 Query: 63 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS 617 MKTIL+SETM+IP+GV V++ AKV+ VEGPRGKL+R+FKHLNLDF L+ G RKL++DAWFG+R+T AAIRTA+SHV NLITGVTKGYRYKMRFVYAHFPINASI N+N AIEIRNFLGEKKVRKVDML+GVT++RS+KVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLE----GGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS 181
BLAST of CX291901 vs. ExPASy Swiss-Prot
Match: RL9_MOUSE (60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=2 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 3.329e-55 Identity = 107/185 (57.84%), Postives = 136/185 (73.51%), Query Frame = 3 Query: 63 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS 617 MKTILS++T+DIP+ V++ + + + V+GPRG L RDF H+N++ L+ + K++L++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVS Sbjct: 1 MKTILSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVS 182
BLAST of CX291901 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.329e-55 Identity = 109/185 (58.92%), Postives = 134/185 (72.43%), Query Frame = 3 Query: 63 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS 617 MKTILS++T+DIPD V V + + + V+GPRG L R+F H+NL+ L+ ++ +KL++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +R+V M GV S KDELVL+GNDIELVS SAALI Q VKNKDIRKFLDGIYVS Sbjct: 1 MKTILSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKKQ---KKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVS 182
BLAST of CX291901 vs. ExPASy Swiss-Prot
Match: RL9_MACFA (60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 4.348e-55 Identity = 108/185 (58.38%), Postives = 135/185 (72.97%), Query Frame = 3 Query: 63 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS 617 MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++D W+G+RK A IRT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVS Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVS 182
BLAST of CX291901 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 4.348e-55 Identity = 107/185 (57.84%), Postives = 135/185 (72.97%), Query Frame = 3 Query: 63 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS 617 MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVS Sbjct: 1 MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVS 182
BLAST of CX291901 vs. ExPASy Swiss-Prot
Match: RL9_RAT (60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 5.679e-55 Identity = 107/185 (57.84%), Postives = 135/185 (72.97%), Query Frame = 3 Query: 63 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS 617 MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVS Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVS 182
BLAST of CX291901 vs. ExPASy Swiss-Prot
Match: RL9_HUMAN (60S ribosomal protein L9 OS=Homo sapiens GN=RPL9 PE=1 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 5.679e-55 Identity = 107/185 (57.84%), Postives = 135/185 (72.97%), Query Frame = 3 Query: 63 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS 617 MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVS Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVS 182 The following BLAST results are available for this feature:
BLAST of CX291901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291901 ID=CX291901; Name=CX291901; organism=Citrus clementina; type=EST; length=619bpback to top |