CX291913
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291913 vs. ExPASy Swiss-Prot
Match: RNF5_RAT (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.602e-18 Identity = 32/60 (53.33%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 305 FDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGN 484 F+CNICL+ +R+ VV+ CGHL+CWPCL++WL D +ECPVCK ++ + + P+YGRG+ Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGS 84
BLAST of CX291913 vs. ExPASy Swiss-Prot
Match: RNF5_MOUSE (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.602e-18 Identity = 32/60 (53.33%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 305 FDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGN 484 F+CNICL+ +R+ VV+ CGHL+CWPCL++WL D +ECPVCK ++ + + P+YGRG+ Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGS 84
BLAST of CX291913 vs. ExPASy Swiss-Prot
Match: RNF5_HUMAN (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.572e-18 Identity = 31/60 (51.67%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 305 FDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGN 484 F+CNICL+ +R+ VV+ CGHL+CWPCL++WL + +ECPVCK ++ + + P+YGRG+ Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVPLYGRGS 84
BLAST of CX291913 vs. ExPASy Swiss-Prot
Match: RN185_DANRE (RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.572e-18 Identity = 32/61 (52.46%), Postives = 46/61 (75.41%), Query Frame = 2 Query: 305 FDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNS 487 F+CNICLD S+D V++ CGHLFCWPCL++WL + + CPVCK ++ + P+YGRG++ Sbjct: 39 FECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST 99
BLAST of CX291913 vs. ExPASy Swiss-Prot
Match: RN185_RAT (RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.687e-17 Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 2 Query: 305 FDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNS 487 F+CNICLD ++D V++ CGHLFCWPCL++WL + + CPVCK ++ + P+YGRG++ Sbjct: 37 FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST 97
BLAST of CX291913 vs. ExPASy Swiss-Prot
Match: RN185_PONAB (RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.687e-17 Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 2 Query: 305 FDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNS 487 F+CNICLD ++D V++ CGHLFCWPCL++WL + + CPVCK ++ + P+YGRG++ Sbjct: 37 FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST 97
BLAST of CX291913 vs. ExPASy Swiss-Prot
Match: RN185_MOUSE (RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.687e-17 Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 2 Query: 305 FDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNS 487 F+CNICLD ++D V++ CGHLFCWPCL++WL + + CPVCK ++ + P+YGRG++ Sbjct: 37 FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST 97
BLAST of CX291913 vs. ExPASy Swiss-Prot
Match: RN185_HUMAN (RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.687e-17 Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 2 Query: 305 FDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNS 487 F+CNICLD ++D V++ CGHLFCWPCL++WL + + CPVCK ++ + P+YGRG++ Sbjct: 37 FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST 97
BLAST of CX291913 vs. ExPASy Swiss-Prot
Match: RN185_CHICK (RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.687e-17 Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 2 Query: 305 FDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNS 487 F+CNICLD ++D V++ CGHLFCWPCL++WL + + CPVCK ++ + P+YGRG++ Sbjct: 39 FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST 99
BLAST of CX291913 vs. ExPASy Swiss-Prot
Match: RNF5_CAEEL (RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.758e-17 Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 2 Query: 305 FDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNST 490 F+CNICLD ++D VV+ CGHLFCWPCL +WL + + CPVCK + + PIYGRG + Sbjct: 24 FECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIYGRGGDS 85 The following BLAST results are available for this feature:
BLAST of CX291913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291913 ID=CX291913; Name=CX291913; organism=Citrus clementina; type=EST; length=494bpback to top |