CX291926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291926 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 5.191e-19 Identity = 46/98 (46.94%), Postives = 58/98 (59.18%), Query Frame = -2 Query: 243 SDYAVLDSVRQHLLGEXXXXXXXXXXXXXXSN-----GAPPTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDR 521 SDYA L+S+R+HLLGE + P Y R+ SFS+LYPC T++WGDLPL+ENDSEDMLV+ L DA GW P ++ DR Sbjct: 9 SDYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSIKPVYGRNPSFSKLYPCFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDR 106
BLAST of CX291926 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.547e-15 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = -2 Query: 252 PTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAE 416 P Y RSSSFS L PCLT++WGDLPL+ NDSEDM+++ FL+DA ++GW P +E Sbjct: 18 PVYCRSSSFSSLMPCLTESWGDLPLKVNDSEDMVIYGFLQDAFSIGWTPSNLTSE 72
BLAST of CX291926 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.028e-14 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = -2 Query: 270 GAPPTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVP 425 G P Y R+SSFSRL PCLT+ WGDLPL+ +DSEDM+++ L+DAL VGW P Sbjct: 16 GEFPVYRRNSSFSRLIPCLTETWGDLPLKVDDSEDMVIYTLLKDALNVGWSP 67
BLAST of CX291926 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.566e-14 Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = -2 Query: 270 PTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVP 416 P Y R+SSFS L PCLTD WGDLPL+ +DSEDM+++ L DALT GW P Sbjct: 10 PVYHRTSSFSSLMPCLTDTWGDLPLKVDDSEDMVIYGLLSDALTTGWTP 58
BLAST of CX291926 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.369e-11 Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = -2 Query: 270 PPTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVP 419 PPT SFS L PCLTD WGDLPL+ +DSEDM+++ L DALT GW P Sbjct: 10 PPT-----SFSSLMPCLTDTWGDLPLKVDDSEDMVIYGLLSDALTAGWTP 54 The following BLAST results are available for this feature:
BLAST of CX291926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291926 ID=CX291926; Name=CX291926; organism=Citrus clementina; type=EST; length=552bpback to top |