CX292046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX292046 vs. ExPASy Swiss-Prot
Match: SCAM_PEA (Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 2.313e-60 Identity = 103/125 (82.40%), Postives = 116/125 (92.80%), Query Frame = 1 Query: 7 LGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDDALVGIFYFIGFGLFCLESLVS 381 LGL +CL WN+V+VT AWIKGEGVKIWFLAIIYFIAGVPGAY LWYRPLYRAFRT+SA+KFGWFF+FYLLHIGFCI A+VAPPI+FKGKSLTG+L A+DV+GD LVGIFYFIGFG FCLE+L+S Sbjct: 131 LGLVLCLTWNVVSVTAAWIKGEGVKIWFLAIIYFIAGVPGAYALWYRPLYRAFRTDSAIKFGWFFMFYLLHIGFCILAAVAPPIVFKGKSLTGILSAIDVVGDYTLVGIFYFIGFGFFCLETLIS 255
BLAST of CX292046 vs. ExPASy Swiss-Prot
Match: SCAM3_ARATH (Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 1.269e-58 Identity = 98/127 (77.17%), Postives = 113/127 (88.98%), Query Frame = 1 Query: 1 TYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDDALVGIFYFIGFGLFCLESLVS 381 TYLGL +CL WNI+AVTTAWIKGEGV IW LA+IYFIAGVPG Y LWYRPLYRAFRT+SA+ FGWFFLFY+LHI FC+FA+VAPP++FKGKSL G+LPA+DV+ A+VGIFYFIGF FCLES+VS Sbjct: 130 TYLGLVLCLFWNIIAVTTAWIKGEGVTIWLLALIYFIAGVPGGYVLWYRPLYRAFRTDSALSFGWFFLFYMLHIAFCVFAAVAPPVVFKGKSLAGILPAIDVLSGQAIVGIFYFIGFAFFCLESVVS 256
BLAST of CX292046 vs. ExPASy Swiss-Prot
Match: SCAM1_ARATH (Secretory carrier-associated membrane protein 1 OS=Arabidopsis thaliana GN=SCAMP1 PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 3.693e-58 Identity = 102/125 (81.60%), Postives = 112/125 (89.60%), Query Frame = 1 Query: 7 LGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDDALVGIFYFIGFGLFCLESLVS 381 LGL VCLLWNIVAVTTAWIKGEG IWFLAIIYFI+GVPGAY +WYRPLYRA RT+SA+KFGWFF YL HI FC+FA+VAPPIIFKGKSLTG+LPA+DV+ + LVGIFYFIGFG FCLESLVS Sbjct: 125 LGLVVCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVMWYRPLYRAMRTDSALKFGWFFFTYLFHIAFCVFAAVAPPIIFKGKSLTGILPAIDVLSGNILVGIFYFIGFGFFCLESLVS 249
BLAST of CX292046 vs. ExPASy Swiss-Prot
Match: SCAM5_ARATH (Secretory carrier-associated membrane protein 5 OS=Arabidopsis thaliana GN=SCAMP5 PE=2 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 1.833e-57 Identity = 99/127 (77.95%), Postives = 113/127 (88.98%), Query Frame = 1 Query: 1 TYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDDALVGIFYFIGFGLFCLESLVS 381 TYLGL + L WNI+AVTTAWIKGEGV IW LA+IYFI+GVPG Y LWYRPLYRAFR++SA FGWFFLFY+LHI FC+FA+VAPPI+FKGKSL G+LPA+DV+ ALVGIFYFIGFGLFCLES+VS Sbjct: 132 TYLGLVLALFWNIIAVTTAWIKGEGVTIWLLAVIYFISGVPGGYVLWYRPLYRAFRSDSAFNFGWFFLFYMLHILFCLFAAVAPPIVFKGKSLAGILPAIDVLSAQALVGIFYFIGFGLFCLESVVS 258
BLAST of CX292046 vs. ExPASy Swiss-Prot
Match: SCAM3_ORYSJ (Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 4.515e-56 Identity = 96/127 (75.59%), Postives = 112/127 (88.19%), Query Frame = 1 Query: 1 TYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDDALVGIFYFIGFGLFCLESLVS 381 ++LGL CL WNI+A TTAW+KGEGV IW LAIIYFI+GVPGAY LWYRPLY A RTESA+KFGWFFLFYL+HI FC++A+VAPP FKGKSL G+LPA+DV+G A+VGIFYF+GFGLFCLESL+S Sbjct: 123 SFLGLAACLFWNIIATTTAWVKGEGVIIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHIIFCVWAAVAPPFPFKGKSLAGILPAIDVIGRSAIVGIFYFVGFGLFCLESLLS 249
BLAST of CX292046 vs. ExPASy Swiss-Prot
Match: SCAM2_ORYSJ (Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 4.992e-55 Identity = 96/125 (76.80%), Postives = 110/125 (88.00%), Query Frame = 1 Query: 7 LGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDDALVGIFYFIGFGLFCLESLVS 381 LGL CL WNI+A T AWIKG GV IW LAIIYFI+GVPGAY LWYRPLY A RTESA+KFGWFFLFYL+HI FCI+++VAPP FKGKSL G+LPA+DV+G++A+VGIFYFIGFGLFCLESL+S Sbjct: 129 LGLAACLFWNIIATTAAWIKGAGVMIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHILFCIWSAVAPPFPFKGKSLAGILPAIDVIGNNAIVGIFYFIGFGLFCLESLLS 253
BLAST of CX292046 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSJ (Secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. japonica GN=SCAMP1 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 9.414e-54 Identity = 90/127 (70.87%), Postives = 113/127 (88.98%), Query Frame = 1 Query: 1 TYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDDALVGIFYFIGFGLFCLESLVS 381 ++LGL CL WN++AVT+AW+KGEGVKIW LAIIYFI+GVPGAY LWYRPLY A RT+SA+KFG FFL YL HI FC+F++VAPP++F+GKSL G+LPA+D++ +ALVGIFYF+GFGLFC+ESL+S Sbjct: 147 SFLGLACCLFWNVIAVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVFSAVAPPVVFEGKSLAGILPAIDLISKNALVGIFYFVGFGLFCVESLLS 273
BLAST of CX292046 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSI (Putative secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. indica GN=SCAMP1 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 9.414e-54 Identity = 90/127 (70.87%), Postives = 113/127 (88.98%), Query Frame = 1 Query: 1 TYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDDALVGIFYFIGFGLFCLESLVS 381 ++LGL CL WN++AVT+AW+KGEGVKIW LAIIYFI+GVPGAY LWYRPLY A RT+SA+KFG FFL YL HI FC+F++VAPP++F+GKSL G+LPA+D++ +ALVGIFYF+GFGLFC+ESL+S Sbjct: 147 SFLGLACCLFWNVIAVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVFSAVAPPVVFEGKSLAGILPAIDLISKNALVGIFYFVGFGLFCVESLLS 273
BLAST of CX292046 vs. ExPASy Swiss-Prot
Match: SCAM4_ORYSJ (Secretory carrier-associated membrane protein 4 OS=Oryza sativa subsp. japonica GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 1.359e-52 Identity = 87/125 (69.60%), Postives = 107/125 (85.60%), Query Frame = 1 Query: 7 LGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDDALVGIFYFIGFGLFCLESLVS 381 LGL +CL WNI+ VT AWIKGEG KIWFLA+IYFI G PGAY LWYRPLYRA R ESA+KFGWFFLFYL+HI FC++A+V+P I+F GKSLTG+ PA+ ++G+ +VG+FYF+GF +FCLESL+S Sbjct: 156 LGLVLCLFWNIICVTAAWIKGEGPKIWFLAVIYFILGCPGAYYLWYRPLYRAMRNESALKFGWFFLFYLVHIAFCVYAAVSPSILFVGKSLTGIFPAISLIGNTVIVGVFYFLGFAMFCLESLLS 280
BLAST of CX292046 vs. ExPASy Swiss-Prot
Match: SCAM2_ARATH (Secretory carrier-associated membrane protein 2 OS=Arabidopsis thaliana GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 1.837e-49 Identity = 89/127 (70.08%), Postives = 106/127 (83.46%), Query Frame = 1 Query: 1 TYLGLFVCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYGLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDDALVGIFYFIGFGLFCLESLVS 381 T LGL CLLWNIVAVT AWIKGEG IW L+IIYF+AGVPGAY LWYRPLYRA RT+SA+KFG FF FY+ HI FC FA+VAPP+IF+GKSLTG LPA++++ +A VGI YFIG G FC+E+L++ Sbjct: 124 TLLGLVGCLLWNIVAVTVAWIKGEGPTIWLLSIIYFLAGVPGAYVLWYRPLYRATRTDSALKFGAFFFFYVFHIAFCGFAAVAPPVIFQGKSLTGFLPAIELLTTNAAVGIMYFIGAGFFCIETLLN 250 The following BLAST results are available for this feature:
BLAST of CX292046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292046 ID=CX292046; Name=CX292046; organism=Citrus clementina; type=EST; length=381bpback to top |