CX292082

Overview
NameCX292082
Unique NameCX292082
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length387
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX292082 vs. ExPASy Swiss-Prot
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 3 
Query:    3 FVTRDDERMLFDIQKFYNVVIEELPSNVADLL 98
            FVTRDDERMLFDIQKFYNVV+EELPSNVADLL
Sbjct:  381 FVTRDDERMLFDIQKFYNVVVEELPSNVADLL 412
The following BLAST results are available for this feature:
BLAST of CX292082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IF4A1_ARATH5.755e-1196.88Eukaryotic initiation factor 4A-1 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC04010C07SK FlavFr1 Citrus clementina cDNA clone C04010C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292082 ID=CX292082; Name=CX292082; organism=Citrus clementina; type=EST; length=387bp
ATTTTGTGACAAGGGATGATGAGAGAATGCTTTTTGATATTCAAAAGTTC
TATAACGTGGTCATTGAGGAGCTGCCTTCAAACGTTGCTGACCTTCTTTG
AGGAGGTTCTGTTTTTGTAAGTTTGTCGAGGCAAGAAGGGGTTTCCTGAT
TTTGCAAGTACTGTTTAATGTGGTGGTTCTTTTCTCCCCTTTTTTTTTTT
TTGGGTTTCTTCTTCCTTTCCGTCAAGGGTCTAAAATTAATGTTGTTCTC
AAACATATCCGACCATTTAATCATATGGGTCATGCACATTTGCAAGCTGC
ACTGGGGGGGGTTTAAAATTATTGAAATTTTTGTTGCTGTAAAAAAAAAA
AAAAAAAAACTCGGGGGGGGGCCCGGTCCCCAATTCC
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