CX292083

Overview
NameCX292083
Unique NameCX292083
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length635
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX292083 vs. ExPASy Swiss-Prot
Match: UBC32_ARATH (Ubiquitin carrier protein E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.910e-18
Identity = 64/148 (43.24%), Postives = 78/148 (52.70%), Query Frame = -2 
Query:  212 QKLIDEIHEYMLSKAPPVPQLST--CEEQPGN-REGEAQASSIDAMVAGAGEGLPAP---VGDRIIEEVQEDXXXXXXXXXXXAGTSR-EVPANASGVQLQPKPETRVQKPADDRLFTWAAVGLTIAILVLLLRKFMKSNGHGAVFMD 634
            QK+IDEIH+Y+LSKA  VP+     C + P    E  +Q    +A+       +      V D+IIEE  E            A     EV   AS    Q       QKP DDRLFTWAAVGLTIAI+VLLL+KF+KSNG+   FMD
Sbjct:  159 QKIIDEIHQYILSKATVVPKPLPLECSQAPSIVSEAHSQVEPQEAITVVEERSIATTDTIVDDQIIEETAEAVNTAASVVPAAAPLPAVEVVVKASVSGEQRMARRAAQKPVDDRLFTWAAVGLTIAIMVLLLKKFIKSNGYSTGFMD 306
The following BLAST results are available for this feature:
BLAST of CX292083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UBC32_ARATH5.910e-1843.24Ubiquitin carrier protein E2 32 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionC04010C10SK FlavFr1 Citrus clementina cDNA clone C04010C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292083 ID=CX292083; Name=CX292083; organism=Citrus clementina; type=EST; length=635bp
GCTGCAGGTTTTTTTTTTGTGTACAAAATGACAGGACAATCTGGCTTACA
ATTGCGTATGAAATTACAGTCATGGGGTATAAAAGATCATATATACGACA
AACTGTTTCAATAAAGATTAATGCCCTTGATGATAATTTCTCCCTTAACT
ACTATGACTTGGAAATTTTGAACTCCCAGATTTGACGAAACCGATAGCAT
ATCTACGAACCATCCATGAAAACAGCACCATGACCATTAGATTTCATGAA
TTTCCTCAGTAAAAGAACCAAAATTGCAATAGTAAGTCCAACAGCAGCCC
ATGTGAACAGTCGATCATCAGCAGGTTTTTGAACCCTAGTCTCCGGTTTT
GGCTGAAGCTGGACTCCAGAGGCGTTGGCAGGAACCTCTCTTGATGTTCC
AGCCACTACGGGGTTGGGATTCACGCTGGCAGGAACATCCTCCTGAACTT
CTTCAATAATCCTATCACCTACTGGGGCTGGGAGCCCTTCCCCAGCACCC
GCAACCATGGCGTCTATGGAACTTGCCTGTGCTTCACCCTCCCTGTTGCC
AGGCTGTTCTTCACAGGTGCTGAGCTGAGGGACAGGGGGTGCCTTGCTTA
ACATATATTCATGGATCTCATCAATGAGTTTTTGA
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