CX292101

Overview
NameCX292101
Unique NameCX292101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DNJ49_ARATH (Chaperone protein dnaJ 49 OS=Arabidopsis thaliana GN=ATJ49 PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 7.273e-57
Identity = 116/199 (58.29%), Postives = 142/199 (71.36%), Query Frame = 2
Query:    2 EEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHN-VXXXXXXAQHDFFDDELDPDEIFRSFFGQQ-DMFRTTRVYRTRGMRSQER-EEFHGAGLNFVFXXXXXXXXXXXXXXXXXXSEPDYSLHRNFNYQIPRTTEKHGIEF 589
            EE+V+L+R I RN DYYAILG+E++CSV+EIRKAYRKLSLKVHPDKNKAPGSEEAFKKV KAF CLSD +SRR +D VG+VDEF+H QR N         ++DFFDDE DP+EIFR+ FGQQ ++FR +  YRTR  R+Q R EE + AG + +                   SEPDYSLH+N +YQIP+TT+   I F
Sbjct:   85 EENVDLVRNIIRNNDYYAILGLEKNCSVDEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQFDQVGIVDEFDHVQRRNRRPRRRYNTRNDFFDDEFDPEEIFRTVFGQQREVFRASHAYRTRQPRNQFREEEINVAGPSCLTIIQILPFFLLLLLAYLPFSEPDYSLHKNQSYQIPKTTQNTEISF 283          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DJB12_MOUSE (DnaJ homolog subfamily B member 12 OS=Mus musculus GN=Dnajb12 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.172e-22
Identity = 60/151 (39.74%), Postives = 84/151 (55.63%), Query Frame = 2
Query:    5 EHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMR-----SQEREEFHGAG 442
            E V  ++++K+ KDYY ILGV RS S E+++KAYRKL+LK HPDKN APG+ EAFK +  A+  LS+ + R+ YD  G  D+     RH          H  F+ ++ P+++F  FFG         VY    MR      Q+R +  G G
Sbjct:   98 EQVAAVKRVKQCKDYYEILGVSRSASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFG--DDKSQAARHGHSHGDF---HRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTYQQRQDRRDNQGDG 243          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DJB14_XENLA (DnaJ homolog subfamily B member 14 OS=Xenopus laevis GN=dnajb14 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.611e-22
Identity = 67/208 (32.21%), Postives = 97/208 (46.63%), Query Frame = 2
Query:    2 EEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG---QQDMFRTTRVYRTRGMRSQ---------EREEFHGAGLNFVFXXXXXXXXXXXXXXXXXXSEPDYSLHRNFNYQIPRTTEKHGIEF 589
            ++ V+ +++IK+ K YY +LGV      E+++KAYRKL+LK HPDKN APG+ EAFKK+  A+  LS+ + R+ YD  G  D  ++N R+          H  F+ ++ P+++F  FFG         T    RTR    Q         E E   G    F+                   S P YSL+      I R TE   I +
Sbjct:   88 QDQVDGVQRIKKCKTYYEVLGVSPDAGEEDLKKAYRKLALKFHPDKNHAPGATEAFKKIGNAYAVLSNPEKRKQYDLTGSEDNVQNNHRNG-----GFDYHRGFEADITPEDLFNMFFGGGFPSGSVHTFSNGRTRYSHHQHHHHSGHDREEERADGGFSMFIQLMPIIVLILVSLLSQLMVSNPPYSLYPRSGQTIKRVTENLQISY 290          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DJB12_BOVIN (DnaJ homolog subfamily B member 12 OS=Bos taurus GN=DNAJB12 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.611e-22
Identity = 60/151 (39.74%), Postives = 83/151 (54.97%), Query Frame = 2
Query:    5 EHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMR-----SQEREEFHGAG 442
            E V  ++++K+ KDYY ILGV R  S E+++KAYRKL+LK HPDKN APG+ EAFK +  A+  LS+ + R+ YD  G  D+     RH          H  F+ ++ P+++F  FFG         VY    MR      Q+R E  G G
Sbjct:   97 EQVAAVKRVKQCKDYYEILGVSRGASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFG--DDKGQAARHGHGHGDF---HRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTYHQRQDRRENQGDG 242          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: YNF5_SCHPO (Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe GN=SPBC17A3.05c PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.816e-22
Identity = 69/220 (31.36%), Postives = 103/220 (46.82%), Query Frame = 2
Query:    2 EEHVELIRQIK-RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFF---DDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQEREEFHGAGLNF-------------VFXXXXXXXXXXXXXXXXXXSEPD-------YSLHRNFNYQIPRTTEKHGIEF 589
            E+H+ + + IK +N  YY IL ++++C+  EI+K+Y+KL+L++HPDKN AP ++EAFK V KAF+ LSD + R HYD  G+  E   +   +           F       + P+++F SFFG Q  F     +   G       +F G   NF             +F                  S  D       YS  +N+ Y +PRTT KH I +
Sbjct:   98 EQHLLVQKIIKYKNHQYYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHYDRTGMDPESRASAASSSFSSNAGGHPGFSAYPQANMSPEDLFNSFFGDQ-FFSGPGTFFFGGGPGIRVHQFGGRPRNFARRQQAQDMPPKSIFYQLLPLIVVILFAFLSNFSWSDSTSVNTRYSFQQNYKYTVPRTTAKHNIPY 316          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DJB12_HUMAN (DnaJ homolog subfamily B member 12 OS=Homo sapiens GN=DNAJB12 PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 7.596e-22
Identity = 58/151 (38.41%), Postives = 83/151 (54.97%), Query Frame = 2
Query:    5 EHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMR-----SQEREEFHGAG 442
            E V  ++++K+ KDYY ILGV R  S E+++KAYR+L+LK HPDKN APG+ EAFK +  A+  LS+ + R+ YD  G  D+     RH          H  F+ ++ P+++F  FFG         VY    MR      Q+R +  G G
Sbjct:   97 EQVAAVKRVKQCKDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFG--DDKSQAARHGHGHGDF---HRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTYQQRQDRRDNQGDG 242          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DJB14_XENTR (DnaJ homolog subfamily B member 14 OS=Xenopus tropicalis GN=dnajb14 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.921e-22
Identity = 50/147 (34.01%), Postives = 83/147 (56.46%), Query Frame = 2
Query:    2 EEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQEREEFHGAG 442
            ++ ++ +++IK+ K YY +LGV      E+++KAYRKL+LK HPDKN APG+ EAFKK+  A+  LS+ + R+ YD  G  D+ ++N R+          H  F+ ++ P+++F  FFG      +   +     R    +  H +G
Sbjct:   92 QDQLDGVQRIKKCKTYYEVLGVSTDAGEEDLKKAYRKLALKFHPDKNHAPGATEAFKKIGNAYAVLSNPEKRKQYDLTGSEDQMQNNHRNG-----GFDYHRGFEADITPEDLFNMFFGGGFPSGSVHTFSNGRARYSHHQHHHHSG 233          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DJC18_MOUSE (DnaJ homolog subfamily C member 18 OS=Mus musculus GN=Dnajc18 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.069e-19
Identity = 49/119 (41.18%), Postives = 71/119 (59.66%), Query Frame = 2
Query:    2 EEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG 358
            EE +  +++IK+ ++YY ILGV  + S EE++KAY+KL+LK HPDKN APG+ EAFK +  AF  LS+ D R  YD  G     +      V        +  F+ ++ P+E+F  FFG
Sbjct:   68 EEQLRGVQRIKKCRNYYDILGVSHNASDEELKKAYKKLALKFHPDKNCAPGATEAFKAIGNAFAVLSNPDKRLRYDEYG-----DEQVTFTVPRARSYHYYKDFEADISPEELFNVFFG 181          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DJC18_BOVIN (DnaJ homolog subfamily C member 18 OS=Bos taurus GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.609e-19
Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 2
Query:    2 EEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG 358
            EE +  +++IK+ ++YY ILGV R  S EE++KAYRKL+LK HPDKN APG+ +AFK +  AF  LS+ D R  YD  G     +               +  F+ ++ P+E+F  FFG
Sbjct:   68 EEQLLGVQRIKKCRNYYEILGVSRDASDEELKKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYG-----DEQVTFTAPRARPYNYYRDFETDITPEELFNVFFG 181          
BLAST of CX292101 vs. ExPASy Swiss-Prot
Match: DJC18_HUMAN (DnaJ homolog subfamily C member 18 OS=Homo sapiens GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.019e-19
Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 2
Query:    2 EEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG 358
            EE +  +++IK+ ++YY ILGV R  S EE++KAYRKL+LK HPDKN APG+ +AFK +  AF  LS+ D R  YD  G     +               +  F+ ++ P+E+F  FFG
Sbjct:   68 EEQLLGVQRIKKCRNYYEILGVSRDASDEELKKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYG-----DEQVTFTAPRARPYNYYRDFEADITPEELFNVFFG 181          
The following BLAST results are available for this feature:
BLAST of CX292101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
DNJ49_ARATH7.273e-5758.29Chaperone protein dnaJ 49 OS=Arabidopsis thaliana ... [more]
DJB12_MOUSE1.172e-2239.74DnaJ homolog subfamily B member 12 OS=Mus musculus... [more]
DJB14_XENLA2.611e-2232.21DnaJ homolog subfamily B member 14 OS=Xenopus laev... [more]
DJB12_BOVIN2.611e-2239.74DnaJ homolog subfamily B member 12 OS=Bos taurus G... [more]
YNF5_SCHPO5.816e-2231.36Uncharacterized J domain-containing protein C17A3.... [more]
DJB12_HUMAN7.596e-2238.41DnaJ homolog subfamily B member 12 OS=Homo sapiens... [more]
DJB14_XENTR9.921e-2234.01DnaJ homolog subfamily B member 14 OS=Xenopus trop... [more]
DJC18_MOUSE2.069e-1941.18DnaJ homolog subfamily C member 18 OS=Mus musculus... [more]
DJC18_BOVIN4.609e-1941.18DnaJ homolog subfamily C member 18 OS=Bos taurus G... [more]
DJC18_HUMAN6.019e-1941.18DnaJ homolog subfamily C member 18 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionC04010E05SK FlavFr1 Citrus clementina cDNA clone C04010E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292101 ID=CX292101; Name=CX292101; organism=Citrus clementina; type=EST; length=590bp
GGAAGAACATGTTGAGTTGATTAGGCAGATTAAGAGGAACAAGGACTATT
ATGCGATTCTTGGTGTGGAGAGAAGTTGTTCGGTTGAGGAGATTAGGAAG
GCATATAGGAAACTCTCTTTGAAAGTTCACCCAGATAAGAATAAGGCTCC
TGGTTCGGAAGAAGCGTTTAAGAAAGTGTGCAAGGCATTTAAGTGCTTGA
GTGATGATGATTCAAGAAGGCATTATGATCATGTAGGTTTGGTTGATGAA
TTTGAGCATAACCAGCGGCATAACGTTAGGCCAAGGAGGAGAAGAGCTCA
GCATGACTTTTTTGATGATGAATTAGATCCTGATGAGATATTCAGGTCAT
TCTTTGGTCAACAAGATATGTTTCGAACAACTCGTGTTTATAGAACTAGA
GGGATGAGAAGCCAAGAGAGGGAGGAGTTTCATGGAGCTGGACTTAATTT
TGTGTTCCTTCTTCAGATATTGCCATTTTTGTTGATATTCTTGCTTGCTT
ACCTTCCCTATTCTGAGCCAGACTACTCTTTGCATCGGAATTTTAATTAT
CAGATTCCTAGGACAACTGAAAAGCATGGAATAGAATTTT
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