CX292103

Overview
NameCX292103
Unique NameCX292103
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13269 contig Ccv1_Contig13269:837..1458. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX292103 vs. ExPASy Swiss-Prot
Match: CBAA1_RAT (Calcium-binding atopy-related autoantigen 1 OS=Rattus norvegicus GN=Cbara1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.180e-23
Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 1
Query:    1 SFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCDLR-ITFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 612
            +F +AFKMFD++ +GE+  EEF+QV +++RS    G  HRD   TG  +K  +    L  YFFG D + +L  + F++F R L  ++L+LEF  +D    G IS   F   ++A + +    KL     QLK  +H  D + +TF+E +NF    + +     AL  Y      L +   Q+ A  V  + L+D+V D++F +FD
Sbjct:  224 NFEIAFKMFDLNGDGEVDMEEFEQVQSIIRSQTSMGMRHRDRPTTGNTLKSGL-CSALTTYFFGADLKGKLTIKNFLEFQRKLQHDVLKLEFERHD-PVDGRISERQFGGMLLAYSGV-QSKKLTAMQRQLK--KHFKDGKGLTFQEVENFFTFLKNINDVDTALSFYHMAGASLDKVTMQQVARTVAKVELSDHVCDVVFALFD 423          
BLAST of CX292103 vs. ExPASy Swiss-Prot
Match: CBAA1_MOUSE (Calcium-binding atopy-related autoantigen 1 OS=Mus musculus GN=Cbara1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.180e-23
Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 1
Query:    1 SFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCDLR-ITFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 612
            +F +AFKMFD++ +GE+  EEF+QV +++RS    G  HRD   TG  +K  +    L  YFFG D + +L  + F++F R L  ++L+LEF  +D    G IS   F   ++A + +    KL     QLK  +H  D + +TF+E +NF    + +     AL  Y      L +   Q+ A  V  + L+D+V D++F +FD
Sbjct:  224 NFEIAFKMFDLNGDGEVDMEEFEQVQSIIRSQTSMGMRHRDRPTTGNTLKSGL-CSALTTYFFGADLKGKLTIKNFLEFQRKLQHDVLKLEFERHD-PVDGRISERQFGGMLLAYSGV-QSKKLTAMQRQLK--KHFKDGKGLTFQEVENFFTFLKNINDVDTALSFYHMAGASLDKVTMQQVARTVAKVELSDHVCDVVFALFD 423          
BLAST of CX292103 vs. ExPASy Swiss-Prot
Match: CBAA1_BOVIN (Calcium-binding atopy-related autoantigen 1 OS=Bos taurus GN=CBARA1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.483e-23
Identity = 68/205 (33.17%), Postives = 110/205 (53.66%), Query Frame = 1
Query:    1 SFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCDLR-ITFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 612
            +F +AFKMFD++ +GE+  EEF+QV +++RS    G  HRD   TG  +K  +    L  YFFG D + +L  + F++F R L  ++L+LEF  +D    G I+   F   ++A + +    KL     QLK  +H  + + +TF+E +NF    + +     AL  Y      L +   Q+ A  V  + L+D+V D++F +FD
Sbjct:  224 NFEIAFKMFDLNGDGEVDMEEFEQVQSIIRSQTSMGMRHRDRSTTGNTLKSGL-CSALTTYFFGADLKGKLTIKNFLEFQRKLQHDVLKLEFERHD-PVDGRITERQFGGMLLAYSGV-QSKKLTAMQKQLK--KHFKEGKGLTFQEVENFFTFLKNINDVDTALSFYHMAGASLDKVTMQQVARTVAKVELSDHVCDVVFALFD 423          
BLAST of CX292103 vs. ExPASy Swiss-Prot
Match: CBAA1_MACFA (Calcium-binding atopy-related autoantigen 1 OS=Macaca fascicularis GN=CBARA1 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 7.647e-23
Identity = 68/205 (33.17%), Postives = 110/205 (53.66%), Query Frame = 1
Query:    1 SFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCDLR-ITFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 612
            +F +AFKMFD++ +GE+  EEF+QV +++RS    G  HRD   TG  +K  +    L  YFFG D + +L  + F++F R L  ++L+LEF  +D    G I+   F   ++A + +    KL     QLK  +H  + + +TF+E +NF    + +     AL  Y      L +   Q+ A  V  + L+D+V D++F +FD
Sbjct:  222 NFEIAFKMFDLNGDGEVDMEEFEQVQSIIRSQTSMGMRHRDRPTTGNTLKSGL-CSALTTYFFGADLKGKLTIKNFLEFQRKLQHDVLKLEFERHD-PVDGRITERQFGGMLLAYSGV-QSKKLTAMQRQLK--KHFKEGKGLTFQEVENFFTFLKNINDVDTALSFYHMAGASLDKVTMQQVARTVAKVELSDHVCDVVFALFD 421          
BLAST of CX292103 vs. ExPASy Swiss-Prot
Match: CBAA1_HUMAN (Calcium-binding atopy-related autoantigen 1 OS=Homo sapiens GN=CBARA1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.647e-23
Identity = 68/205 (33.17%), Postives = 110/205 (53.66%), Query Frame = 1
Query:    1 SFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCDLR-ITFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 612
            +F +AFKMFD++ +GE+  EEF+QV +++RS    G  HRD   TG  +K  +    L  YFFG D + +L  + F++F R L  ++L+LEF  +D    G I+   F   ++A + +    KL     QLK  +H  + + +TF+E +NF    + +     AL  Y      L +   Q+ A  V  + L+D+V D++F +FD
Sbjct:  222 NFEIAFKMFDLNGDGEVDMEEFEQVQSIIRSQTSMGMRHRDRPTTGNTLKSGL-CSALTTYFFGADLKGKLTIKNFLEFQRKLQHDVLKLEFERHD-PVDGRITERQFGGMLLAYSGV-QSKKLTAMQRQLK--KHFKEGKGLTFQEVENFFTFLKNINDVDTALSFYHMAGASLDKVTMQQVARTVAKVELSDHVCDVVFALFD 421          
BLAST of CX292103 vs. ExPASy Swiss-Prot
Match: CBAA1_DANRE (Calcium-binding atopy-related autoantigen 1 OS=Danio rerio GN=cbara1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.987e-23
Identity = 69/209 (33.01%), Postives = 108/209 (51.67%), Query Frame = 1
Query:    1 SFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDF-----ALSMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 612
            +F +AFKMFD++ +GE+  EEF+QV +++RS    G  HRD   TG  +K    +  L  YFFG D + +L    F++F R L  ++L+LEF   D    G I+ + F     A S V S  +  + K L R+   K+ +      ITFEE +NF    + +     AL  Y      + +   ++ A  V  + L+D+V D++F +FD
Sbjct:  233 NFEIAFKMFDLNGDGEVDLEEFEQVQSIIRSQTSMGMRHRDRSTTGNTLKTGGCSSALTTYFFGADLKGKLTISSFLEFQRKLQHDVLKLEFERND-PVDGRITEKQFGGMLLAYSGVQSRKLKQMQKNLKRM--FKDAQ-----GITFEEVENFFTFLKNVNDVDTALSFYHMAGASIDKATMKQVARTVAKVELSDHVCDVVFALFD 433          
BLAST of CX292103 vs. ExPASy Swiss-Prot
Match: EFHA2_MOUSE (EF-hand domain-containing family member A2 OS=Mus musculus GN=Efha2 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 5.671e-18
Identity = 67/255 (26.27%), Postives = 114/255 (44.71%), Query Frame = 1
Query:    4 FSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQG-----------------AFHR-------------------DGLRTGLN-------------VKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNR 621
            F +AF MFD D N  + K+EF  +  + R  N +                   +H                    D LR   +             +   V +  L+ +FFG+ G+A L  E F +FM NL  E+L +EF  Y      TIS EDFA  ++   ++ + +  L  V    +E    +  ITF+EF++F +    L+ F +AL  Y   +  + +D+F+RA Y   G+ L+ ++++ +F++FD ++
Sbjct:  230 FRIAFNMFDTDGNEMVDKKEFLVLQEIFRKKNEKRETKGDEEKRAMLRLQLYGYHSPTNSVLKTDAGELVSRSYWDTLRRSTSQALFSDLAERADDITSLVADTTLLVHFFGKKGKAELNFEDFYRFMDNLQTEVLEIEFLSYS-NGMNTISEEDFAHILLRYTNVENTSVFLENVRYSISE----EKGITFDEFRSFFQFLNNLEDFAIALNMYNFASRSIGQDEFKRAVYVATGLKLSPHLVNTVFKIFDVDK 479          
BLAST of CX292103 vs. ExPASy Swiss-Prot
Match: EFHA2_HUMAN (EF-hand domain-containing family member A2 OS=Homo sapiens GN=EFHA2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.815e-17
Identity = 63/255 (24.71%), Postives = 110/255 (43.14%), Query Frame = 1
Query:    4 FSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGL-------------------------------------------------NVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFDSNR 621
            F +AF MFD D N  + K+EF  +  + R  N +     D  +  +                                                 ++   V +  L+ +FFG+ G+A L  E F +FM NL  E+L +EF  Y      TIS EDFA  ++   ++ + +  L  V     E    +  ITF+EF++F +    L+ F +AL  Y   +  + +D+F+RA Y   G+  + ++++ +F++FD ++
Sbjct:  237 FRIAFNMFDTDGNEMVDKKEFLVLQEIFRKKNEKREIKGDEEKRAMLRLQLYGYHSPTNSVLKTDAEELVSRSYWDTLRRNTSQALFSDLAERADDITSLVTDTTLLVHFFGKKGKAELNFEDFYRFMDNLQTEVLEIEFLSYS-NGMNTISEEDFAHILLRYTNVENTSVFLENVRYSIPE----EKGITFDEFRSFFQFLNNLEDFAIALNMYNFASRSIGQDEFKRAVYVATGLKFSPHLVNTVFKIFDVDK 486          
BLAST of CX292103 vs. ExPASy Swiss-Prot
Match: EFHA1_MOUSE (EF-hand domain-containing family member A1 OS=Mus musculus GN=Efha1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.494e-15
Identity = 59/212 (27.83%), Postives = 101/212 (47.64%), Query Frame = 1
Query:    4 FSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRT---------GLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 612
            F VAFKM D+D N  I ++EF ++  ++          +DG +T            VK P  N  L   FFG+ G  +L +++F +FM NL  E+  +EF  +  K    +  EDFA  ++   +  + +     V     E+      I+ +EFK+F      L+ F +A+  +   +  +   +F+RA     G  L+DN++D +F++FD
Sbjct:  174 FHVAFKMLDVDGNEMIERKEFVKLQKIISK--------QDGFKTVKTNETEYQDPTVKEPGVNTTLQVRFFGKRGEKKLHYKEFRRFMENLQTEVQEMEFLQFS-KGLNFMRKEDFAEWLLFFTNTENKDIYWRNV----REKLSVGESISLDEFKSFCHFTTHLEDFAIAMQMFSLAHRPVRLAEFKRAVKVATGQELSDNLLDTVFKIFD 372          
BLAST of CX292103 vs. ExPASy Swiss-Prot
Match: EFHA1_RAT (EF-hand domain-containing family member A1 OS=Rattus norvegicus GN=Efha1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.665e-15
Identity = 58/212 (27.36%), Postives = 102/212 (48.11%), Query Frame = 1
Query:    4 FSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRT---------GLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVASADMGHLNKLLNRVDQLKNERHLCDLRITFEEFKNFAELRRKLQPFCLALFSYGKVNGLLTRDDFQRAAYRVCGILLTDNVIDIIFQVFD 612
            F VAFKM D+D N  I ++EF ++  ++          +DG +T            VK P  N  L   FFG+ G  +L +++F +F+ NL  E+  +EF  +  K    +  EDFA  ++   +  + +     V     E+      I+ +EFK+F      L+ F +A+ ++   +  +   +F+RA     G  L+DN++D +F++FD
Sbjct:  174 FHVAFKMLDVDGNEMIERKEFVRLQKIISK--------QDGFKTVKTNETEYQDPTVKEPGVNTTLQVRFFGKRGEKKLHYKEFRRFVENLQTEVQEMEFLQFS-KGLNFMRKEDFAEWLLFFTNTENKDIYWRNV----REKLSVGESISLDEFKSFCHFTTHLEDFAIAMQTFSLAHRPVRLAEFKRAVKVATGQELSDNLLDTVFKIFD 372          
The following BLAST results are available for this feature:
BLAST of CX292103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CBAA1_RAT1.180e-2334.15Calcium-binding atopy-related autoantigen 1 OS=Rat... [more]
CBAA1_MOUSE1.180e-2334.15Calcium-binding atopy-related autoantigen 1 OS=Mus... [more]
CBAA1_BOVIN4.483e-2333.17Calcium-binding atopy-related autoantigen 1 OS=Bos... [more]
CBAA1_MACFA7.647e-2333.17Calcium-binding atopy-related autoantigen 1 OS=Mac... [more]
CBAA1_HUMAN7.647e-2333.17Calcium-binding atopy-related autoantigen 1 OS=Hom... [more]
CBAA1_DANRE9.987e-2333.01Calcium-binding atopy-related autoantigen 1 OS=Dan... [more]
EFHA2_MOUSE5.671e-1826.27EF-hand domain-containing family member A2 OS=Mus ... [more]
EFHA2_HUMAN2.815e-1724.71EF-hand domain-containing family member A2 OS=Homo... [more]
EFHA1_MOUSE4.494e-1527.83EF-hand domain-containing family member A1 OS=Mus ... [more]
EFHA1_RAT7.665e-1527.36EF-hand domain-containing family member A1 OS=Ratt... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC04010E07SK FlavFr1 Citrus clementina cDNA clone C04010E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292103 ID=CX292103; Name=CX292103; organism=Citrus clementina; type=EST; length=622bp
AGCTTTTCTGTGGCCTTCAAGATGTTTGACATTGACAACAATGGGGAGAT
CAGTAAGGAAGAATTTAAGCAAGTCATGGCTTTGATGAGATCTCATAACA
GACAAGGGGCTTTCCATAGGGATGGACTTCGGACTGGGCTAAATGTTAAG
GGTCCTGTGGAAAATGGAGGTCTGGTGGAATACTTCTTTGGTGAAGATGG
AAGAGCACGGCTCCAACATGAGAAATTTGTCCAATTTATGAGAAATTTGT
ATGAGGAAATGCTGAGACTGGAGTTTGCACATTATGACTACAAGCAACGG
GGAACCATATCAGCCGAGGACTTTGCGCTGTCCATGGTTGCTTCTGCTGA
TATGGGACACTTAAACAAATTGCTTAATCGGGTTGATCAATTAAAGAATG
AGCGGCATCTTTGTGATTTACGCATTACATTTGAAGAATTTAAAAATTTT
GCCGAGCTGCGGAGAAAATTGCAGCCATTTTGTTTGGCCCTTTTTAGTTA
TGGAAAAGTAAATGGTTTGTTGACACGGGATGACTTCCAACGAGCTGCAT
ACCGTGTCTGCGGCATATTACTCACTGACAACGTGATTGACATCATTTTC
CAAGTGTTTGACTCAAATCGTG
back to top