CX292113

Overview
NameCX292113
Unique NameCX292113
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length443
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292113 vs. ExPASy Swiss-Prot
Match: P2R3A_HUMAN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha OS=Homo sapiens GN=PPP2R3A PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 3.152e-37
Identity = 71/150 (47.33%), Postives = 106/150 (70.67%), Query Frame = 1
Query:    1 IFS-QVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKSCKLSGSVFNILLNLNKFMAFETRDPFLIRQEREN--PTLTEWDR 441
            IFS  V R  T + EG+M Y DFV+F++SEEDK +  S+EYWF+C+D+DG+GV++  E+++FYEEQ  RME M  EP+ F D+LCQ++D++ P     ITLRDLK C+++   ++   NL K++  E RDPF ++++ EN  P  ++WDR
Sbjct:  939 IFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDR 1088          
BLAST of CX292113 vs. ExPASy Swiss-Prot
Match: P2R3B_HUMAN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta OS=Homo sapiens GN=PPP2R3B PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 3.053e-32
Identity = 57/136 (41.91%), Postives = 97/136 (71.32%), Query Frame = 1
Query:   40 EGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKSCKLSGSVFNILLNLNKFMAFETRDPFLIRQEREN--PTLTEWDR 441
            EGK+ Y DFV+F++SEEDK +  S+EYWF+C+DLDG+G ++  E+++FYEEQ  R++ MA E + F+D LCQ++D++ P  +  ITL+DLK CKL+   F+   N+ K++  E ++   + ++ ++  P L++W++
Sbjct:  369 EGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEK 504          
BLAST of CX292113 vs. ExPASy Swiss-Prot
Match: P2R3A_MOUSE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha OS=Mus musculus GN=Ppp2r3a PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 8.882e-32
Identity = 64/146 (43.84%), Postives = 96/146 (65.75%), Query Frame = 1
Query:    7 SQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKSCKLSGSVFNILLNLNKFMAFETRDPFLIRQERE-NPTLTEWDR 441
            +++PRK      GK+ Y DFV+F+LSEEDK++  S EYWF+C+DLDG+G ++  E++FFYEEQ  RM     EP+ F D+  Q++D++ P     ITLRDLK C L+G  F+   N++K++A E R+     Q+ + +P  + WDR
Sbjct:  306 ARLPRKV-----GKLSYADFVWFLLSEEDKTTPTSTEYWFRCMDLDGDGALSMFELEFFYEEQAQRMAARGVEPLPFHDLARQVLDLVAPRCPGRITLRDLKQCGLAGEFFDAFFNVDKYLAREQREQAGTPQDTDSDPAASAWDR 446          
BLAST of CX292113 vs. ExPASy Swiss-Prot
Match: P2R3C_XENTR (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Xenopus tropicalis GN=ppp2r3c PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.391e-15
Identity = 40/127 (31.50%), Postives = 75/127 (59.06%), Query Frame = 1
Query:   40 EGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKSCKLSGSVFNILLNLNKFMAFETRDPFLIRQERENP 420
            +G+M Y+ ++ F+L+ E++    +L+Y FK +D++  G +    + FF+     +M+   QE V F+D+  +I DM+ P++   ITL+DL       +V +IL++LN F  +E R+  L+  + E+P
Sbjct:  317 DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGSLNVFSLNFFFRAIQEQMKIHGQEAVSFQDVKDEIFDMVKPKDPLRITLQDLIQSSQGDTVCSILIDLNGFWTYENRE-VLVANDGESP 442          
BLAST of CX292113 vs. ExPASy Swiss-Prot
Match: P2R3C_DANRE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Danio rerio GN=ppp2r3c PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.391e-15
Identity = 38/126 (30.16%), Postives = 73/126 (57.94%), Query Frame = 1
Query:   40 EGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKSCKLSGSVFNILLNLNKFMAFETRDPFLIRQEREN 417
            +G+M Y+ ++ F+L+ E++    +L+Y FK +D++  G +    + +F+     +M+   QEPV F+D+  +I DM+ P++   ITL+DL +     +V +IL++LN F  +E R+  +      N
Sbjct:  325 DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDMENKGYLNVFALNYFFRAIQEQMKIHGQEPVSFQDVKDEIFDMVKPKDPYKITLQDLVNSGQGDTVSSILIDLNGFWTYENREVLVANDTDSN 450          
BLAST of CX292113 vs. ExPASy Swiss-Prot
Match: P2R3C_BOVIN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Bos taurus GN=PPP2R3C PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.391e-15
Identity = 39/128 (30.47%), Postives = 75/128 (58.59%), Query Frame = 1
Query:   40 EGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKSCKLSGSVFNILLNLNKFMAFETRDPFLIRQERENPT 423
            +G+M Y+ ++ F+L+ E++    +L+Y FK +D++  G +    + +F+      M+   Q+PV F+D+  +I DM+ P++   I+L+DL +     +V  IL++LN F  +E R+  L+  + EN T
Sbjct:  322 DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTYENREA-LVANDNENST 448          
BLAST of CX292113 vs. ExPASy Swiss-Prot
Match: P2R3C_RAT (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Rattus norvegicus GN=Ppp2r3c PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 9.865e-15
Identity = 38/126 (30.16%), Postives = 74/126 (58.73%), Query Frame = 1
Query:   40 EGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKSCKLSGSVFNILLNLNKFMAFETRDPFLIRQEREN 417
            +G+M Y+ ++ F+L+ E++    +L+Y FK +D++  G +    + +F+      M+   Q+PV F+D+  +I DM+ P++   I+L+DL +     +V  IL++LN F  +E R+  L+  + EN
Sbjct:  322 DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTYENREA-LVANDNEN 446          
BLAST of CX292113 vs. ExPASy Swiss-Prot
Match: P2R3C_MOUSE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Mus musculus GN=Ppp2r3c PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 9.865e-15
Identity = 38/126 (30.16%), Postives = 74/126 (58.73%), Query Frame = 1
Query:   40 EGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKSCKLSGSVFNILLNLNKFMAFETRDPFLIRQEREN 417
            +G+M Y+ ++ F+L+ E++    +L+Y FK +D++  G +    + +F+      M+   Q+PV F+D+  +I DM+ P++   I+L+DL +     +V  IL++LN F  +E R+  L+  + EN
Sbjct:  322 DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTYENREA-LVANDNEN 446          
BLAST of CX292113 vs. ExPASy Swiss-Prot
Match: P2R3C_HUMAN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Homo sapiens GN=PPP2R3C PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.288e-14
Identity = 38/126 (30.16%), Postives = 74/126 (58.73%), Query Frame = 1
Query:   40 EGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKSCKLSGSVFNILLNLNKFMAFETRDPFLIRQEREN 417
            +G+M Y+ ++ F+L+ E++    +L+Y FK +D++  G +    + +F+      M+   Q+PV F+D+  +I DM+ P++   I+L+DL +     +V  IL++LN F  +E R+  L+  + EN
Sbjct:  322 DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTYENREA-LVANDSEN 446          
The following BLAST results are available for this feature:
BLAST of CX292113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
P2R3A_HUMAN3.152e-3747.33Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3B_HUMAN3.053e-3241.91Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3A_MOUSE8.882e-3243.84Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_XENTR3.391e-1531.50Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_DANRE3.391e-1530.16Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_BOVIN3.391e-1530.47Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_RAT9.865e-1530.16Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_MOUSE9.865e-1530.16Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_HUMAN1.288e-1430.16Serine/threonine-protein phosphatase 2A regulatory... [more]
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Properties
Property NameValue
Genbank descriptionC04010F06SK FlavFr1 Citrus clementina cDNA clone C04010F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292113 ID=CX292113; Name=CX292113; organism=Citrus clementina; type=EST; length=443bp
ATATTTTCTCAGGTTCCTAGAAAGTTCACTAGTAAGGTTGAAGGGAAGAT
GGGGTATGAAGACTTTGTCTACTTCATACTGTCTGAGGAGGATAAGTCAT
CTGAGCCTAGTCTTGAATATTGGTTCAAGTGTATAGATTTGGATGGAAAT
GGAGTTATCACCCGGAATGAAATGCAATTCTTTTATGAAGAGCAGTTGCA
TCGAATGGAATGTATGGCCCAAGAGCCTGTGCTCTTTGAGGATATATTGT
GTCAGATAATTGACATGATTGGACCAGAGAATCAGAGCTATATTACGCTG
CGTGACTTGAAAAGTTGTAAACTTTCAGGAAGCGTTTTCAATATACTTTT
GAACCTCAATAAATTTATGGCCTTTGAAACTCGTGACCCATTTCTTATTC
GTCAGGAGCGAGAGAACCCAACACTGACAGAATGGGATCGCTT
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