CX292115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX292115 vs. ExPASy Swiss-Prot
Match: ARNA_PSE14 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=arnA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.208e-16 Identity = 53/171 (30.99%), Postives = 84/171 (49.12%), Query Frame = 3 Query: 69 RGTTQSKISSSVLLLETEMAGASVRLDLDGR-PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 554 RG +S + L E + S LD + R P + + ++G GFIG+HL E++L + + I +D+ +D I+ H +E + + I++H IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I ST EVYG Sbjct: 283 RGDNGLYLSGAQLAREFGLVEGSQLLDTEKRRPARRTRVLILGVNGFIGNHLSERLLQDDRYDIYGMDIGSDAIERLRTKPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRVIFPSTSEVYG 440
BLAST of CX292115 vs. ExPASy Swiss-Prot
Match: ARNA_PSEU2 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas syringae pv. syringae (strain B728a) GN=arnA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15 Identity = 52/171 (30.41%), Postives = 83/171 (48.54%), Query Frame = 3 Query: 69 RGTTQSKISSSVLLLETEMAGASVRLD-LDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 554 RG +S L E + S LD R ++ + ++G GFIG+HL E++L + ++I +D+ +D I+ H +E + + I++H IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I ST EVYG Sbjct: 284 RGDNGLYLSGEQLAREFGLVAGSQMLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRAKPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRVIFPSTSEVYG 441
BLAST of CX292115 vs. ExPASy Swiss-Prot
Match: ARNA_PSEPF (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas fluorescens (strain Pf0-1) GN=arnA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.969e-15 Identity = 49/143 (34.27%), Postives = 75/143 (52.45%), Query Frame = 3 Query: 129 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 554 G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I L R F +I H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I ST EVYG Sbjct: 304 GSLLRGAESGRGPRRTRVLILGVNGFIGNHLSERLLRDERYEVYGLDIGSDAIDRL------RSHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYG 440
BLAST of CX292115 vs. ExPASy Swiss-Prot
Match: ARNA_PSEF5 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=arnA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.041e-14 Identity = 47/150 (31.33%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 129 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 554 G+ +R GR + + ++G GFIG+HL E++L + + + LD+ +D I+ H +E + ++ I++H IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I ST EVYG Sbjct: 304 GSLLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDKYDVYGLDIGSDAIERLRSHPNFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYG 440
BLAST of CX292115 vs. ExPASy Swiss-Prot
Match: ARNA_PSEFS (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas fluorescens (strain SBW25) GN=arnA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.359e-14 Identity = 47/150 (31.33%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 129 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 554 G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+ H +E + + I++H IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I ST EVYG Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHPNFHYVEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYG 440
BLAST of CX292115 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP3 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae (strain 342) GN=arnA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.319e-14 Identity = 45/126 (35.71%), Postives = 69/126 (54.76%), Query Frame = 3 Query: 180 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 554 + ++G GFIG+HL E++L + ++I LD+ +D I LE + R F +I H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLE------SPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPSTSEVYG 437
BLAST of CX292115 vs. ExPASy Swiss-Prot
Match: ARNA_PECCP (Bifunctional polymyxin resistance protein arnA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14 Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 180 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 554 + ++G GFIG+HL E++L + ++I LD+ +D I L G R F +I H+ +E IK D+ + L AI TP +Y PL +F + L +V+ C NKR++ ST EVYG Sbjct: 324 VLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFL------GDPRFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPSTSEVYG 443
BLAST of CX292115 vs. ExPASy Swiss-Prot
Match: ARNA_ERWCT (Bifunctional polymyxin resistance protein arnA OS=Erwinia carotovora subsp. atroseptica GN=arnA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14 Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 180 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 554 + ++G GFIG+HL E++L + ++I LD+ +D I L G R F +I H+ +E IK D+ + L AI TP +Y PL +F + L +V+ C NKR++ ST EVYG Sbjct: 325 VLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFL------GDPRFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPSTSEVYG 444
BLAST of CX292115 vs. ExPASy Swiss-Prot
Match: ARNA_SERP5 (Bifunctional polymyxin resistance protein arnA OS=Serratia proteamaculans (strain 568) GN=arnA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.746e-14 Identity = 46/126 (36.51%), Postives = 67/126 (53.17%), Query Frame = 3 Query: 180 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 554 + ++G GFIG+HL E++L + + I LD+ +D I L G R F +I H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLRDDRYDIYGLDIGSDAISRFL------GNPRFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPSTSEVYG 437
BLAST of CX292115 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP7 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=arnA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.746e-14 Identity = 44/126 (34.92%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 180 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 554 + ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I ST EVYG Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPSTSEVYG 437 The following BLAST results are available for this feature:
BLAST of CX292115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292115 ID=CX292115; Name=CX292115; organism=Citrus clementina; type=EST; length=557bpback to top |